RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 TMEM37Q8WXS4 190 aa10.53□□□□□ -0.72
CPNE1-225ENST00000483495 MISP3Q96FF7 219 aa10.53□□□□□ -0.72
CPNE1-225ENST00000483495 YPEL4Q96NS1 127 aa10.53□□□□□ -0.72
CPNE1-225ENST00000483495 RNF2Q99496 336 aa10.53□□□□□ -0.72
CPNE1-225ENST00000483495 SMIM7Q9BQ49 75 aa10.53□□□□□ -0.72
CPNE1-225ENST00000483495 SLC25A33Q9BSK2 321 aa10.53□□□□□ -0.72
CPNE1-225ENST00000483495 MRPL32Q9BYC8 188 aaKnown RBP10.53□□□□□ -0.72
CPNE1-225ENST00000483495 PARLQ9H300 379 aa10.53□□□□□ -0.72
CPNE1-225ENST00000483495 TECRQ9NZ01 308 aaKnown RBP10.53□□□□□ -0.72
CPNE1-225ENST00000483495 NAT8Q9UHE5 227 aa10.53□□□□□ -0.72
CPNE1-225ENST00000483495 TACC2O95359 2948 aa10.52□□□□□ -0.72
CPNE1-225ENST00000483495 NAV3Q8IVL0 2385 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 IGHV4-61A0A0C4DH41 118 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 CXorf65A6NEN9 183 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 F6UZH7 168 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 CNIH1O95406 144 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 MT-ND4LP03901 98 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 APELAP0DMC3 54 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 FOLR2P14207 255 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 PAX1P15863 534 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 CTRB1P17538 263 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 NPPCP23582 126 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 ATP5J2P56134 94 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 SRSF1Q07955 248 aaKnown RBP eCLIP10.52□□□□□ -0.733e-6■□□□□ 9.1
CPNE1-225ENST00000483495 RNF212Q495C1 297 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 CTRB2Q6GPI1 263 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 C19orf35Q6ZS72 473 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 HIST1H2BAQ96A08 127 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 TRGV9Q99603 122 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 FLNCQ14315 2725 aa10.52□□□□□ -0.73
CPNE1-225ENST00000483495 PLXNB1O43157 2135 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 IGHV3-48P01763 117 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 ATP5G3P48201 142 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 TAS2R45P59539 299 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 UBE2G2P60604 165 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 ZNF90Q03938 601 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 FXYD3Q14802 87 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 TMEM241Q24JQ0 296 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 SMUG1Q53HV7 270 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 CST9LP1Q5W188 147 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 RUSC1-AS1Q66K80 236 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 CLEC2AQ6UVW9 174 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 ZNF562Q6V9R5 426 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 PQLC2Q6ZP29 291 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 C22orf15Q8WYQ4 148 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 ISOC2Q96AB3 205 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 RPUSD4Q96CM3 377 aaKnown RBP10.51□□□□□ -0.73
CPNE1-225ENST00000483495 DNAJC4Q9NNZ3 241 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 TMEM242Q9NWH2 141 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 COL12A1Q99715 3063 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 I3L2K1 104 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 OR2C1O95371 312 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 OR1L6Q8NGR2 347 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 OR1L4Q8NGR5 311 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 ZNF503Q96F45 646 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 PFDN5Q99471 154 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 WNT10AQ9GZT5 417 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 TMEM167BQ9NRX6 74 aa10.51□□□□□ -0.73
CPNE1-225ENST00000483495 YTHDF2Q9Y5A9 579 aaKnown RBP10.51□□□□□ -0.73
CPNE1-225ENST00000483495 CRYBA1P05813 215 aa10.5□□□□□ -0.73
CPNE1-225ENST00000483495 FAM106CPP0CH98 169 aa10.5□□□□□ -0.73
CPNE1-225ENST00000483495 C8orf88P0DMB2 117 aa10.5□□□□□ -0.73
CPNE1-225ENST00000483495 SAA4P35542 130 aa10.5□□□□□ -0.73
CPNE1-225ENST00000483495 ZNF674Q2M3X9 581 aa10.5□□□□□ -0.73
CPNE1-225ENST00000483495 TNFRSF19Q9NS68 423 aa10.5□□□□□ -0.73
CPNE1-225ENST00000483495 SPTAN1Q13813 2472 aaKnown RBP10.5□□□□□ -0.73
CPNE1-225ENST00000483495 CENPVL3A0A0U1RRI6 287 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 NPFFO15130 113 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 TMEM11P17152 192 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 CX3CL1P78423 397 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 PATE2Q6UY27 113 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 OR51G1Q8NGK1 321 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 FAM167A-AS1Q96KT0 104 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 DOK5Q9P104 306 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 AKAP6Q13023 2319 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 IGHV4-30-2A0A087WSY4 118 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 ELOA3CA0A087WX78 387 aaPredicted RBP10.49□□□□□ -0.73
CPNE1-225ENST00000483495 NPIPB5A8MRT5 1133 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 BRS3P32247 399 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 BPIFB3P59826 476 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 RAB5BP61020 215 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 RPL23P62829 140 aaKnown RBP10.49□□□□□ -0.73
CPNE1-225ENST00000483495 PIP4P2Q8N4L2 257 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 FAM24BQ8N5W8 94 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 OR4X1Q8NH49 305 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 ARPC1AQ92747 370 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 CTDSP1Q9GZU7 261 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 C1RLQ9NZP8 487 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 PRELID1Q9Y255 219 aa10.49□□□□□ -0.73
CPNE1-225ENST00000483495 ZFYVE26Q68DK2 2539 aa10.48□□□□□ -0.73
CPNE1-225ENST00000483495 ZNF462Q96JM2 2506 aa10.48□□□□□ -0.73
CPNE1-225ENST00000483495 NCBP2LA6PVI3 153 aaKnown RBP10.48□□□□□ -0.73
CPNE1-225ENST00000483495 K7EIM0 57 aa10.48□□□□□ -0.73
CPNE1-225ENST00000483495 COX7A2P2O60397 106 aa10.48□□□□□ -0.73
CPNE1-225ENST00000483495 DSCR9P59020 149 aa10.48□□□□□ -0.73
CPNE1-225ENST00000483495 PLP1P60201 277 aa10.48□□□□□ -0.73
CPNE1-225ENST00000483495 ASPHD1Q5U4P2 390 aa10.48□□□□□ -0.73
CPNE1-225ENST00000483495 C10orf113Q5VZT2 155 aa10.48□□□□□ -0.73
CPNE1-225ENST00000483495 Q8N9W7 124 aa10.48□□□□□ -0.73
CPNE1-225ENST00000483495 C11orf52Q96A22 123 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms