RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 LAMTOR1Q6IAA8 161 aa10.44□□□□□ -0.74
VARS-225ENST00000482996 Q6ZRM9 215 aa10.44□□□□□ -0.74
VARS-225ENST00000482996 DUSP18Q8NEJ0 188 aa10.44□□□□□ -0.74
VARS-225ENST00000482996 OR52E5Q8NH55 327 aa10.44□□□□□ -0.74
VARS-225ENST00000482996 IL22RA2Q969J5 263 aa10.44□□□□□ -0.74
VARS-225ENST00000482996 GALNT14Q96FL9 552 aa10.44□□□□□ -0.74
VARS-225ENST00000482996 SPATA25Q9BR10 227 aa10.44□□□□□ -0.74
VARS-225ENST00000482996 CACNG5Q9UF02 275 aa10.44□□□□□ -0.74
VARS-225ENST00000482996 CACFD1Q9UGQ2 172 aa10.44□□□□□ -0.74
VARS-225ENST00000482996 TMEM56-RWDD3S4R434 201 aa10.44□□□□□ -0.74
VARS-225ENST00000482996 C15orf62A8K5M9 175 aa10.43□□□□□ -0.74
VARS-225ENST00000482996 YIF1AO95070 293 aa10.43□□□□□ -0.74
VARS-225ENST00000482996 IGHV3-48P01763 117 aa10.43□□□□□ -0.74
VARS-225ENST00000482996 RNASE2P10153 161 aaKnown RBP10.43□□□□□ -0.74
VARS-225ENST00000482996 ANXA3P12429 323 aa10.43□□□□□ -0.74
VARS-225ENST00000482996 AKR1C4P17516 323 aa10.43□□□□□ -0.74
VARS-225ENST00000482996 CCR6P51684 374 aa10.43□□□□□ -0.74
VARS-225ENST00000482996 SRPXP78539 464 aa10.43□□□□□ -0.74
VARS-225ENST00000482996 TMEM187Q14656 261 aa10.43□□□□□ -0.74
VARS-225ENST00000482996 AARDQ4LEZ3 155 aa10.43□□□□□ -0.74
VARS-225ENST00000482996 DEFB125Q8N687 156 aa10.43□□□□□ -0.74
VARS-225ENST00000482996 TMEM230Q96A57 120 aa10.43□□□□□ -0.74
VARS-225ENST00000482996 GPR146Q96CH1 333 aa10.43□□□□□ -0.74
VARS-225ENST00000482996 SLC25A21Q9BQT8 299 aaPredicted RBP10.43□□□□□ -0.74
VARS-225ENST00000482996 C20orf85Q9H1P6 137 aa10.43□□□□□ -0.74
VARS-225ENST00000482996 SRD5A3Q9H8P0 318 aa10.43□□□□□ -0.74
VARS-225ENST00000482996 NUDT15Q9NV35 164 aa10.43□□□□□ -0.74
VARS-225ENST00000482996 TRAV6A0A075B6T7 132 aa10.42□□□□□ -0.74
VARS-225ENST00000482996 IGHV3OR16-8A0A075B7F1 116 aa10.42□□□□□ -0.74
VARS-225ENST00000482996 PIGBOS1A0A0B4J2F0 54 aa10.42□□□□□ -0.74
VARS-225ENST00000482996 ZNF207O43670 478 aaKnown RBP10.42□□□□□ -0.74
VARS-225ENST00000482996 SCGB2A1O75556 95 aa10.42□□□□□ -0.74
VARS-225ENST00000482996 TCRBP04435 133 aa10.42□□□□□ -0.74
VARS-225ENST00000482996 H2AFB2P0C5Z0 115 aa10.42□□□□□ -0.74
VARS-225ENST00000482996 SULT1A3P0DMM9 295 aa10.42□□□□□ -0.74
VARS-225ENST00000482996 SULT1A4P0DMN0 295 aa10.42□□□□□ -0.74
VARS-225ENST00000482996 PVRIGQ6DKI7 326 aa10.42□□□□□ -0.74
VARS-225ENST00000482996 SPAG8Q99932 426 aaPredicted RBP10.42□□□□□ -0.74
VARS-225ENST00000482996 HEYLQ9NQ87 328 aaPredicted RBP10.42□□□□□ -0.74
VARS-225ENST00000482996 CEBPZOSA8MTT3 80 aa10.41□□□□□ -0.74
VARS-225ENST00000482996 INMT-MINDY4F8WBC2 141 aa10.41□□□□□ -0.74
VARS-225ENST00000482996 TSPAN4O14817 238 aa10.41□□□□□ -0.74
VARS-225ENST00000482996 NDUFB6O95139 128 aa10.41□□□□□ -0.74
VARS-225ENST00000482996 OPRK1P41145 380 aa10.41□□□□□ -0.74
VARS-225ENST00000482996 HTR2BP41595 481 aa10.41□□□□□ -0.74
VARS-225ENST00000482996 TMED4Q7Z7H5 227 aa10.41□□□□□ -0.74
VARS-225ENST00000482996 LGI3Q8N145 548 aa10.41□□□□□ -0.74
VARS-225ENST00000482996 GINS3Q9BRX5 216 aa10.41□□□□□ -0.74
VARS-225ENST00000482996 WFDC10AQ9H1F0 79 aa10.41□□□□□ -0.74
VARS-225ENST00000482996 DNAH7Q8WXX0 4024 aa10.4□□□□□ -0.74
VARS-225ENST00000482996 hCG_2014768A0A024R1R8 64 aa10.4□□□□□ -0.74
VARS-225ENST00000482996 A0A0B4J2A0 478 aa10.4□□□□□ -0.74
VARS-225ENST00000482996 IGHV7-4-1A0A0J9YVY3 117 aa10.4□□□□□ -0.74
VARS-225ENST00000482996 RPS10-NUDT3A0A1W2PQS6 291 aa10.4□□□□□ -0.74
VARS-225ENST00000482996 C3orf84H3BNL1 204 aa10.4□□□□□ -0.74
VARS-225ENST00000482996 BTCP35070 178 aa10.4□□□□□ -0.74
VARS-225ENST00000482996 BMI1P35226 326 aa10.4□□□□□ -0.74
VARS-225ENST00000482996 SUPT4H1P63272 117 aaKnown RBP10.4□□□□□ -0.74
VARS-225ENST00000482996 BSXQ3C1V8 233 aa10.4□□□□□ -0.74
VARS-225ENST00000482996 LINC00322Q6ZN03 302 aaPredicted RBP10.4□□□□□ -0.74
VARS-225ENST00000482996 ZNF600Q6ZNG1 722 aa10.4□□□□□ -0.74
VARS-225ENST00000482996 TMEM116Q8NCL8 245 aa10.4□□□□□ -0.74
VARS-225ENST00000482996 HIPK2Q9H2X6 1198 aa10.4□□□□□ -0.74
VARS-225ENST00000482996 GPN1Q9HCN4 374 aaPredicted RBP10.4□□□□□ -0.74
VARS-225ENST00000482996 SHPKQ9UHJ6 478 aa10.4□□□□□ -0.74
VARS-225ENST00000482996 SMPXQ9UHP9 88 aa10.4□□□□□ -0.74
VARS-225ENST00000482996 TRAV14DV4A0A0A6YYC5 116 aa10.39□□□□□ -0.75
VARS-225ENST00000482996 RBMY1BA6NDE4 496 aaKnown RBP10.39□□□□□ -0.75
VARS-225ENST00000482996 RBMY1EA6NEQ0 496 aaKnown RBP10.39□□□□□ -0.75
VARS-225ENST00000482996 OR4C46A6NHA9 309 aa10.39□□□□□ -0.75
VARS-225ENST00000482996 PRAF2O60831 178 aa10.39□□□□□ -0.75
VARS-225ENST00000482996 TMEM50AO95807 157 aa10.39□□□□□ -0.75
VARS-225ENST00000482996 RBMY1DP0C7P1 496 aaKnown RBP10.39□□□□□ -0.75
VARS-225ENST00000482996 C2orf83Q53S99 150 aa10.39□□□□□ -0.75
VARS-225ENST00000482996 TMEM128Q5BJH2 165 aa10.39□□□□□ -0.75
VARS-225ENST00000482996 LYZL2Q7Z4W2 148 aa10.39□□□□□ -0.75
VARS-225ENST00000482996 NOXA1Q86UR1 476 aa10.39□□□□□ -0.75
VARS-225ENST00000482996 OR4X1Q8NH49 305 aa10.39□□□□□ -0.75
VARS-225ENST00000482996 OR10C1Q96KK4 312 aa10.39□□□□□ -0.75
VARS-225ENST00000482996 CITED4Q96RK1 184 aa10.39□□□□□ -0.75
VARS-225ENST00000482996 RHPN1-AS1Q9BWJ2 59 aa10.39□□□□□ -0.75
VARS-225ENST00000482996 PRR13Q9NZ81 148 aa10.39□□□□□ -0.75
VARS-225ENST00000482996 CHEK1O14757 476 aa10.38□□□□□ -0.75
VARS-225ENST00000482996 CLN5O75503 358 aa10.38□□□□□ -0.75
VARS-225ENST00000482996 SMCO1Q147U7 214 aa10.38□□□□□ -0.75
VARS-225ENST00000482996 NMSQ5H8A3 153 aa10.38□□□□□ -0.75
VARS-225ENST00000482996 TOMM20LQ6UXN7 152 aa10.38□□□□□ -0.75
VARS-225ENST00000482996 Q6ZNX1 250 aa10.38□□□□□ -0.75
VARS-225ENST00000482996 SLC24A4Q8NFF2 622 aa10.38□□□□□ -0.75
VARS-225ENST00000482996 MUC7Q8TAX7 377 aa10.38□□□□□ -0.75
VARS-225ENST00000482996 RNASEH2CQ8TDP1 164 aaKnown RBP10.38□□□□□ -0.75
VARS-225ENST00000482996 ZNF414Q96IQ9 312 aa10.38□□□□□ -0.75
VARS-225ENST00000482996 MARVELD1Q9BSK0 173 aa10.38□□□□□ -0.75
VARS-225ENST00000482996 FNDC4Q9H6D8 234 aaPredicted RBP10.38□□□□□ -0.75
VARS-225ENST00000482996 PUS1Q9Y606 427 aaKnown RBP eCLIP10.38□□□□□ -0.75
VARS-225ENST00000482996 KMT2CQ8NEZ4 4911 aaKnown RBP10.37□□□□□ -0.75
VARS-225ENST00000482996 TRAV30A0A087WSZ9 112 aa10.37□□□□□ -0.75
VARS-225ENST00000482996 IGHV3-49A0A0A0MS15 119 aa10.37□□□□□ -0.75
VARS-225ENST00000482996 DUXBA0A1W2PPF3 345 aa10.37□□□□□ -0.75
VARS-225ENST00000482996 NXPH3O95157 252 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms