RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 APCP25054 2843 aa12.61□□□□□ -0.39
RXRA-202ENST00000481739 FOXH1O75593 365 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 MOSP00540 346 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 CRYGCP07315 174 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 DEFA4P12838 97 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 GCHFRP30047 84 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 DEFB113Q30KQ7 82 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 VMO1Q7Z5L0 202 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 NPBQ8NG41 125 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 MALSU1Q96EH3 234 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 PFDN5Q99471 154 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 PARLQ9H300 379 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 SEPSECSQ9HD40 501 aaKnown RBP12.6□□□□□ -0.39
RXRA-202ENST00000481739 TBL2Q9Y4P3 447 aaKnown RBP12.6□□□□□ -0.39
RXRA-202ENST00000481739 VPS13CQ709C8 3753 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 MED13LQ71F56 2210 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 IGHV2-70DA0A0C4DH43 119 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 NBR2O15453 112 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 EIF3GO75821 320 aaKnown RBP eCLIP12.6□□□□□ -0.39
RXRA-202ENST00000481739 NDUFA3O95167 84 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 CRYBA1P05813 215 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 PLGLAQ15195 96 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 MMDQ15546 238 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 FAM78BQ5VT40 261 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 OR1L6Q8NGR2 347 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 OR1L4Q8NGR5 311 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 ACY3Q96HD9 319 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 SIRPDQ9H106 197 aa12.6□□□□□ -0.39
RXRA-202ENST00000481739 NBPF19A0A087WUL8 3843 aa12.59□□□□□ -0.39
RXRA-202ENST00000481739 TCRBV4S1A1TA0A5B7 111 aa12.59□□□□□ -0.39
RXRA-202ENST00000481739 RAB5AP20339 215 aa12.59□□□□□ -0.39
RXRA-202ENST00000481739 CNTFRP26992 372 aa12.59□□□□□ -0.39
RXRA-202ENST00000481739 BPIFB3P59826 476 aa12.59□□□□□ -0.39
RXRA-202ENST00000481739 RAB5BP61020 215 aa12.59□□□□□ -0.39
RXRA-202ENST00000481739 OR2T10Q8NGZ9 312 aa12.59□□□□□ -0.39
RXRA-202ENST00000481739 SRSF12Q8WXF0 261 aaKnown RBP12.59□□□□□ -0.39
RXRA-202ENST00000481739 ISOC2Q96AB3 205 aa12.59□□□□□ -0.39
RXRA-202ENST00000481739 YPEL4Q96NS1 127 aa12.59□□□□□ -0.39
RXRA-202ENST00000481739 FBXL15Q9H469 300 aa12.59□□□□□ -0.39
RXRA-202ENST00000481739 FNDC4Q9H6D8 234 aaPredicted RBP12.59□□□□□ -0.39
RXRA-202ENST00000481739 DOK5Q9P104 306 aa12.59□□□□□ -0.39
RXRA-202ENST00000481739 F11RQ9Y624 299 aaKnown RBP12.59□□□□□ -0.39
RXRA-202ENST00000481739 TEX22C9J3V5 150 aa12.58□□□□□ -0.4
RXRA-202ENST00000481739 CLDN34H7C241 214 aa12.58□□□□□ -0.4
RXRA-202ENST00000481739 HOXB4P17483 251 aaPredicted RBP12.58□□□□□ -0.4
RXRA-202ENST00000481739 LGALS4P56470 323 aa12.58□□□□□ -0.4
RXRA-202ENST00000481739 SSX2Q16385 188 aa12.58□□□□□ -0.4
RXRA-202ENST00000481739 LDLRAD2Q5SZI1 272 aa12.58□□□□□ -0.4
RXRA-202ENST00000481739 CST9LP1Q5W188 147 aa12.58□□□□□ -0.4
RXRA-202ENST00000481739 TMEM116Q8NCL8 245 aa12.58□□□□□ -0.4
RXRA-202ENST00000481739 RPUSD4Q96CM3 377 aaKnown RBP12.58□□□□□ -0.4
RXRA-202ENST00000481739 POLR3KQ9Y2Y1 108 aaPredicted RBP12.58□□□□□ -0.4
RXRA-202ENST00000481739 NAV2Q8IVL1 2488 aa12.58□□□□□ -0.4
RXRA-202ENST00000481739 WNK2Q9Y3S1 2297 aa12.58□□□□□ -0.4
RXRA-202ENST00000481739 C1orf196B1AJZ1 125 aa12.58□□□□□ -0.4
RXRA-202ENST00000481739 SLC25A16P16260 332 aa12.58□□□□□ -0.4
RXRA-202ENST00000481739 FAM24BQ8N5W8 94 aa12.58□□□□□ -0.4
RXRA-202ENST00000481739 OR2T6Q8NHC8 308 aa12.58□□□□□ -0.4
RXRA-202ENST00000481739 HILPDAQ9Y5L2 63 aa12.58□□□□□ -0.4
RXRA-202ENST00000481739 AREGP15514 252 aa12.57□□□□□ -0.4
RXRA-202ENST00000481739 UBE2E1P51965 193 aa12.57□□□□□ -0.4
RXRA-202ENST00000481739 RND2P52198 227 aa12.57□□□□□ -0.4
RXRA-202ENST00000481739 GNB1P62873 340 aa12.57□□□□□ -0.4
RXRA-202ENST00000481739 KLRD1Q13241 179 aa12.57□□□□□ -0.4
RXRA-202ENST00000481739 EBI3Q14213 229 aa12.57□□□□□ -0.4
RXRA-202ENST00000481739 ZNF674Q2M3X9 581 aa12.57□□□□□ -0.4
RXRA-202ENST00000481739 NPIPB3Q92617 1050 aa12.57□□□□□ -0.4
RXRA-202ENST00000481739 UHRF2Q96PU4 802 aa12.57□□□□□ -0.4
RXRA-202ENST00000481739 TRGV9Q99603 122 aa12.57□□□□□ -0.4
RXRA-202ENST00000481739 DNAJC4Q9NNZ3 241 aa12.57□□□□□ -0.4
RXRA-202ENST00000481739 FASNP49327 2511 aaKnown RBP12.56□□□□□ -0.4
RXRA-202ENST00000481739 ELOA3CA0A087WX78 387 aaPredicted RBP12.56□□□□□ -0.4
RXRA-202ENST00000481739 C8orf88P0DMB2 117 aa12.56□□□□□ -0.4
RXRA-202ENST00000481739 MLANAQ16655 118 aa12.56□□□□□ -0.4
RXRA-202ENST00000481739 C1QL4Q86Z23 238 aa12.56□□□□□ -0.4
RXRA-202ENST00000481739 LRRC75A-AS1Q8N1F1 130 aa12.56□□□□□ -0.4
RXRA-202ENST00000481739 EAF1Q96JC9 268 aaPredicted RBP12.56□□□□□ -0.4
RXRA-202ENST00000481739 CSMD2Q7Z408 3487 aa12.56□□□□□ -0.4
RXRA-202ENST00000481739 PSMB11A5LHX3 300 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 TOX4O94842 621 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 ATP5G3P48201 142 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 UBE2G2P60604 165 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 ADIRFQ15847 76 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 MIR17HGQ75NE6 70 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 LHFPL4Q7Z7J7 247 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 C11orf52Q96A22 123 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 ANAPC16Q96DE5 110 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 MISP3Q96FF7 219 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 SLC25A33Q9BSK2 321 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 TGOLN2O43493 480 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 COX7A2P2O60397 106 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 CNIH1O95406 144 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 REG1AP05451 166 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 RPL23P62829 140 aaKnown RBP12.55□□□□□ -0.4
RXRA-202ENST00000481739 C5orf64Q2M2E5 130 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 Q5PR19 223 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 SPATA31B1PQ5VZV4 182 aa12.55□□□□□ -0.4
RXRA-202ENST00000481739 IGKV1D-37A0A075B6S9 117 aa12.54□□□□□ -0.4
RXRA-202ENST00000481739 A0A1W2PRD5 423 aa12.54□□□□□ -0.4
RXRA-202ENST00000481739 A0A1W2PRF3 423 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms