RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 QTRT1Q9BXR0 403 aaKnown RBP12.59□□□□□ -0.39
RXRB-203ENST00000481441 COMMD5Q9GZQ3 224 aa12.59□□□□□ -0.39
RXRB-203ENST00000481441 C21orf62Q9NYP8 219 aa12.59□□□□□ -0.39
RXRB-203ENST00000481441 IGKV3-7A0A075B6H7 116 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 IGHV3-21A0A0B4J1V1 117 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 IGHV4-28A0A0C4DH34 117 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 CYB5BO43169 146 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 PPYP01298 95 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 SERPINE2P07093 398 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 FXYD4P59646 89 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 WT1-ASQ06250 92 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 OXA1LQ15070 435 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 POU2AF1Q16633 256 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 FAM90A2PQ658T7 463 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 PVRIGQ6DKI7 326 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 SLC25A24Q6NUK1 477 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 SPAG16Q8N0X2 631 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 POM121L12Q8N7R1 296 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 TMEM116Q8NCL8 245 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 DUSP18Q8NEJ0 188 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 TERB2Q8NHR7 220 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 SCARB1Q8WTV0 552 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 RNF126Q9BV68 326 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 FXYD6Q9H0Q3 95 aa12.58□□□□□ -0.4
RXRB-203ENST00000481441 RBFOX2O43251 390 aaKnown RBP eCLIP12.57□□□□□ -0.4
RXRB-203ENST00000481441 TNFSF12O43508 249 aa12.57□□□□□ -0.4
RXRB-203ENST00000481441 NDUFB6O95139 128 aa12.57□□□□□ -0.4
RXRB-203ENST00000481441 TCRBP04435 133 aa12.57□□□□□ -0.4
RXRB-203ENST00000481441 CTSGP08311 255 aa12.57□□□□□ -0.4
RXRB-203ENST00000481441 FGF2P09038 288 aa12.57□□□□□ -0.4
RXRB-203ENST00000481441 OR13C7P0DN81 318 aa12.57□□□□□ -0.4
RXRB-203ENST00000481441 TAS2R31P59538 309 aa12.57□□□□□ -0.4
RXRB-203ENST00000481441 HERV-K104P61576 105 aa12.57□□□□□ -0.4
RXRB-203ENST00000481441 CENPSQ8N2Z9 138 aa12.57□□□□□ -0.4
RXRB-203ENST00000481441 GBGT1Q8N5D6 347 aa12.57□□□□□ -0.4
RXRB-203ENST00000481441 MARCH1Q8TCQ1 289 aa12.57□□□□□ -0.4
RXRB-203ENST00000481441 MOB3AQ96BX8 217 aa12.57□□□□□ -0.4
RXRB-203ENST00000481441 AGRNO00468 2067 aa12.56□□□□□ -0.4
RXRB-203ENST00000481441 IGHV3-49A0A0A0MS15 119 aa12.56□□□□□ -0.4
RXRB-203ENST00000481441 K7EIM0 57 aa12.56□□□□□ -0.4
RXRB-203ENST00000481441 M0R2N4 97 aa12.56□□□□□ -0.4
RXRB-203ENST00000481441 NQO2P16083 231 aa12.56□□□□□ -0.4
RXRB-203ENST00000481441 TRIM16LQ309B1 348 aa12.56□□□□□ -0.4
RXRB-203ENST00000481441 THOC7Q6I9Y2 204 aaKnown RBP12.56□□□□□ -0.4
RXRB-203ENST00000481441 ZNF575Q86XF7 245 aa12.56□□□□□ -0.4
RXRB-203ENST00000481441 UBAC2Q8NBM4 344 aa12.56□□□□□ -0.4
RXRB-203ENST00000481441 OR10C1Q96KK4 312 aa12.56□□□□□ -0.4
RXRB-203ENST00000481441 SLC25A21Q9BQT8 299 aaPredicted RBP12.56□□□□□ -0.4
RXRB-203ENST00000481441 CCL28Q9NRJ3 127 aa12.56□□□□□ -0.4
RXRB-203ENST00000481441 COPZ2Q9P299 210 aa12.56□□□□□ -0.4
RXRB-203ENST00000481441 FLVCR2Q9UPI3 526 aa12.56□□□□□ -0.4
RXRB-203ENST00000481441 AMBPP02760 352 aa12.55□□□□□ -0.4
RXRB-203ENST00000481441 GIG44P09565 113 aaPredicted RBP12.55□□□□□ -0.4
RXRB-203ENST00000481441 TRAPPC2P0DI81 140 aa12.55□□□□□ -0.4
RXRB-203ENST00000481441 TRAPPC2BP0DI82 140 aa12.55□□□□□ -0.4
RXRB-203ENST00000481441 PGAM2P15259 253 aa12.55□□□□□ -0.4
RXRB-203ENST00000481441 MSMO1Q15800 293 aa12.55□□□□□ -0.4
RXRB-203ENST00000481441 LGALS9BQ3B8N2 356 aa12.55□□□□□ -0.4
RXRB-203ENST00000481441 HSD17B13Q7Z5P4 300 aaPredicted RBP12.55□□□□□ -0.4
RXRB-203ENST00000481441 SECTM1Q8WVN6 248 aa12.55□□□□□ -0.4
RXRB-203ENST00000481441 C20orf85Q9H1P6 137 aa12.55□□□□□ -0.4
RXRB-203ENST00000481441 TMEM140Q9NV12 185 aa12.55□□□□□ -0.4
RXRB-203ENST00000481441 NUDT15Q9NV35 164 aa12.55□□□□□ -0.4
RXRB-203ENST00000481441 PLA2G2EQ9NZK7 142 aa12.55□□□□□ -0.4
RXRB-203ENST00000481441 F11RQ9Y624 299 aaKnown RBP12.55□□□□□ -0.4
RXRB-203ENST00000481441 HSPG2P98160 4391 aa12.54□□□□□ -0.4
RXRB-203ENST00000481441 TRAV6A0A075B6T7 132 aa12.54□□□□□ -0.4
RXRB-203ENST00000481441 ELOA3CA0A087WX78 387 aaPredicted RBP12.54□□□□□ -0.4
RXRB-203ENST00000481441 TEX50A0A1B0GTY4 177 aa12.54□□□□□ -0.4
RXRB-203ENST00000481441 HPRT1P00492 218 aa12.54□□□□□ -0.4
RXRB-203ENST00000481441 P0DMU3 169 aa12.54□□□□□ -0.4
RXRB-203ENST00000481441 FAM231AP0DMU4 169 aa12.54□□□□□ -0.4
RXRB-203ENST00000481441 FAM231CP0DMU5 169 aa12.54□□□□□ -0.4
RXRB-203ENST00000481441 MIFP14174 115 aa12.54□□□□□ -0.4
RXRB-203ENST00000481441 UCP3P55916 312 aa12.54□□□□□ -0.4
RXRB-203ENST00000481441 Q56UQ5 140 aa12.54□□□□□ -0.4
RXRB-203ENST00000481441 LEMD1Q68G75 181 aa12.54□□□□□ -0.4
RXRB-203ENST00000481441 SLC5A7Q9GZV3 580 aa12.54□□□□□ -0.4
RXRB-203ENST00000481441 GPR132Q9UNW8 380 aa12.54□□□□□ -0.4
RXRB-203ENST00000481441 IGHV3OR16-13A0A075B7E8 117 aa12.53□□□□□ -0.4
RXRB-203ENST00000481441 IGHV3-74A0A0B4J1X5 117 aa12.53□□□□□ -0.4
RXRB-203ENST00000481441 DFFBO76075 338 aa12.53□□□□□ -0.4
RXRB-203ENST00000481441 H2AFB2P0C5Z0 115 aa12.53□□□□□ -0.4
RXRB-203ENST00000481441 PI3P19957 117 aa12.53□□□□□ -0.4
RXRB-203ENST00000481441 DEFB131AP59861 70 aa12.53□□□□□ -0.4
RXRB-203ENST00000481441 PAFAH1B2P68402 229 aa12.53□□□□□ -0.4
RXRB-203ENST00000481441 RELQ04864 619 aaPredicted RBP12.53□□□□□ -0.4
RXRB-203ENST00000481441 SURF2Q15527 256 aaPredicted RBP12.53□□□□□ -0.4
RXRB-203ENST00000481441 NDUFA4L2Q9NRX3 87 aa12.53□□□□□ -0.4
RXRB-203ENST00000481441 X6R8D5 127 aa12.53□□□□□ -0.4
RXRB-203ENST00000481441 TRAV14DV4A0A0A6YYC5 116 aa12.52□□□□□ -0.41
RXRB-203ENST00000481441 ZNF705EA8MWA4 302 aaPredicted RBP12.52□□□□□ -0.41
RXRB-203ENST00000481441 NUPL2O15504 423 aaKnown RBP12.52□□□□□ -0.41
RXRB-203ENST00000481441 YIF1AO95070 293 aa12.52□□□□□ -0.41
RXRB-203ENST00000481441 RLN1P04808 185 aa12.52□□□□□ -0.41
RXRB-203ENST00000481441 GNRHRP30968 328 aa12.52□□□□□ -0.41
RXRB-203ENST00000481441 TCF24Q7RTU0 167 aa12.52□□□□□ -0.41
RXRB-203ENST00000481441 TMED4Q7Z7H5 227 aa12.52□□□□□ -0.41
RXRB-203ENST00000481441 ZBTB34Q8NCN2 500 aa12.52□□□□□ -0.41
RXRB-203ENST00000481441 SCGB3A2Q96PL1 93 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms