RNA–Protein interactions for RNA: ENST00000481238.1

TMED4-205, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 1 (best) BASIC

Gene TMED4, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-205ENST00000481238 STAG3L3P0CL85 134 aa17.98■□□□□ 0.47
TMED4-205ENST00000481238 SOHLH1Q5JUK2 328 aa17.98■□□□□ 0.47
TMED4-205ENST00000481238 TMEM116Q8NCL8 245 aa17.98■□□□□ 0.47
TMED4-205ENST00000481238 FAM103A1Q9BTL3 118 aaKnown RBP17.98■□□□□ 0.47
TMED4-205ENST00000481238 C19orf24Q9BVV8 132 aa17.98■□□□□ 0.47
TMED4-205ENST00000481238 TCRBV4S1A1TA0A5B7 111 aa17.97■□□□□ 0.47
TMED4-205ENST00000481238 MT-CO2P00403 227 aa17.97■□□□□ 0.47
TMED4-205ENST00000481238 IGHV4-38-2P0DP08 117 aa17.97■□□□□ 0.47
TMED4-205ENST00000481238 GATA2P23769 480 aaPredicted RBP17.97■□□□□ 0.47
TMED4-205ENST00000481238 PSMB3P49720 205 aa17.97■□□□□ 0.47
TMED4-205ENST00000481238 RND2P52198 227 aa17.97■□□□□ 0.47
TMED4-205ENST00000481238 LOXL1Q08397 574 aaPredicted RBP17.97■□□□□ 0.47
TMED4-205ENST00000481238 RASL11BQ9BPW5 248 aa17.97■□□□□ 0.47
TMED4-205ENST00000481238 MANBALQ9NQG1 85 aa17.97■□□□□ 0.47
TMED4-205ENST00000481238 HLA-DRB1P01911 266 aa17.96■□□□□ 0.47
TMED4-205ENST00000481238 FBP1P09467 338 aa17.96■□□□□ 0.47
TMED4-205ENST00000481238 BTN1A1Q13410 526 aa17.96■□□□□ 0.47
TMED4-205ENST00000481238 BRD3OSQ6XYD6 125 aa17.96■□□□□ 0.47
TMED4-205ENST00000481238 C22orf15Q8WYQ4 148 aa17.96■□□□□ 0.47
TMED4-205ENST00000481238 PSMG3-AS1Q96PY0 264 aa17.96■□□□□ 0.47
TMED4-205ENST00000481238 SEPSECSQ9HD40 501 aaKnown RBP17.96■□□□□ 0.47
TMED4-205ENST00000481238 NAV3Q8IVL0 2385 aa17.96■□□□□ 0.47
TMED4-205ENST00000481238 IGHV7-81A0A0B4J1V7 117 aa17.96■□□□□ 0.47
TMED4-205ENST00000481238 NPIPB5A8MRT5 1133 aa17.96■□□□□ 0.47
TMED4-205ENST00000481238 I3L2K1 104 aa17.96■□□□□ 0.47
TMED4-205ENST00000481238 SELENOTP62341 195 aa17.96■□□□□ 0.47
TMED4-205ENST00000481238 FBN2P35556 2912 aa17.95■□□□□ 0.46
TMED4-205ENST00000481238 A0A0U1RQK1 487 aa17.95■□□□□ 0.46
TMED4-205ENST00000481238 CXorf1O96002 111 aa17.95■□□□□ 0.46
TMED4-205ENST00000481238 NDPQ00604 133 aa17.95■□□□□ 0.46
TMED4-205ENST00000481238 ASPHD1Q5U4P2 390 aa17.95■□□□□ 0.46
TMED4-205ENST00000481238 TTC9CQ8N5M4 171 aa17.95■□□□□ 0.46
TMED4-205ENST00000481238 CYB561D1Q8N8Q1 229 aa17.95■□□□□ 0.46
TMED4-205ENST00000481238 CLRN3Q8NCR9 226 aa17.95■□□□□ 0.46
TMED4-205ENST00000481238 CRYBG3Q68DQ2 2970 aa17.95■□□□□ 0.46
TMED4-205ENST00000481238 NDUFS6O75380 124 aaKnown RBP17.94■□□□□ 0.46
TMED4-205ENST00000481238 NPBWR1P48145 328 aa17.94■□□□□ 0.46
TMED4-205ENST00000481238 IQCF2Q8IXL9 164 aa17.94■□□□□ 0.46
TMED4-205ENST00000481238 MBD6Q96DN6 1003 aa17.94■□□□□ 0.46
TMED4-205ENST00000481238 TRGV9Q99603 122 aa17.94■□□□□ 0.46
TMED4-205ENST00000481238 EGR2P11161 476 aaPredicted RBP17.94■□□□□ 0.46
TMED4-205ENST00000481238 FAM78BQ5VT40 261 aa17.94■□□□□ 0.46
TMED4-205ENST00000481238 SPATA31B1PQ5VZV4 182 aa17.94■□□□□ 0.46
TMED4-205ENST00000481238 NANPQ8TBE9 248 aa17.94■□□□□ 0.46
TMED4-205ENST00000481238 PIFOQ8TCI5 191 aa17.94■□□□□ 0.46
TMED4-205ENST00000481238 TNFRSF19Q9NS68 423 aa17.94■□□□□ 0.46
TMED4-205ENST00000481238 FUT9Q9Y231 359 aa17.94■□□□□ 0.46
TMED4-205ENST00000481238 VPS13CQ709C8 3753 aa17.94■□□□□ 0.46
TMED4-205ENST00000481238 AVPP01185 164 aa17.93■□□□□ 0.46
TMED4-205ENST00000481238 OR5G3P0C626 314 aa17.93■□□□□ 0.46
TMED4-205ENST00000481238 ARL14EPLP0DKL9 152 aa17.93■□□□□ 0.46
TMED4-205ENST00000481238 MEF2BQ02080 365 aaPredicted RBP17.93■□□□□ 0.46
TMED4-205ENST00000481238 ZNF90Q03938 601 aa17.93■□□□□ 0.46
TMED4-205ENST00000481238 KLF17Q5JT82 389 aaPredicted RBP17.93■□□□□ 0.46
TMED4-205ENST00000481238 SPNS3Q6ZMD2 512 aa17.93■□□□□ 0.46
TMED4-205ENST00000481238 GATAD1Q8WUU5 269 aa17.93■□□□□ 0.46
TMED4-205ENST00000481238 IGHV3-21A0A0B4J1V1 117 aa17.92■□□□□ 0.46
TMED4-205ENST00000481238 PSMB11A5LHX3 300 aa17.92■□□□□ 0.46
TMED4-205ENST00000481238 J3QLI3 93 aa17.92■□□□□ 0.46
TMED4-205ENST00000481238 CD81P60033 236 aa17.92■□□□□ 0.46
TMED4-205ENST00000481238 OR4X1Q8NH49 305 aa17.92■□□□□ 0.46
TMED4-205ENST00000481238 RBM14Q96PK6 669 aaKnown RBP17.92■□□□□ 0.46
TMED4-205ENST00000481238 RNF223E7ERA6 249 aa17.91■□□□□ 0.46
TMED4-205ENST00000481238 PAGE4O60829 102 aa17.91■□□□□ 0.46
TMED4-205ENST00000481238 Q5PR19 223 aa17.91■□□□□ 0.46
TMED4-205ENST00000481238 MIR17HGQ75NE6 70 aa17.91■□□□□ 0.46
TMED4-205ENST00000481238 TMEM37Q8WXS4 190 aa17.91■□□□□ 0.46
TMED4-205ENST00000481238 RNF2Q99496 336 aa17.91■□□□□ 0.46
TMED4-205ENST00000481238 DNAJC4Q9NNZ3 241 aa17.91■□□□□ 0.46
TMED4-205ENST00000481238 USP9YO00507 2555 aaPredicted RBP17.91■□□□□ 0.46
TMED4-205ENST00000481238 K7EIM0 57 aa17.91■□□□□ 0.46
TMED4-205ENST00000481238 DNASE2O00115 360 aaPredicted RBP17.91■□□□□ 0.46
TMED4-205ENST00000481238 CEBPGP53567 150 aa17.91■□□□□ 0.46
TMED4-205ENST00000481238 PRSS57Q6UWY2 283 aa17.91■□□□□ 0.46
TMED4-205ENST00000481238 OR1L4Q8NGR5 311 aa17.91■□□□□ 0.46
TMED4-205ENST00000481238 HSPB9Q9BQS6 159 aa17.91■□□□□ 0.46
TMED4-205ENST00000481238 C5orf56Q8N8D9 126 aa17.9■□□□□ 0.46
TMED4-205ENST00000481238 FANCD2OSQ96PS1 177 aa17.9■□□□□ 0.46
TMED4-205ENST00000481238 SSX3Q99909 188 aa17.9■□□□□ 0.46
TMED4-205ENST00000481238 MRPL32Q9BYC8 188 aaKnown RBP17.9■□□□□ 0.46
TMED4-205ENST00000481238 TECRQ9NZ01 308 aaKnown RBP17.9■□□□□ 0.46
TMED4-205ENST00000481238 IGLV11-55A0A075B6I3 123 aa17.89■□□□□ 0.45
TMED4-205ENST00000481238 GCHFRP30047 84 aa17.89■□□□□ 0.45
TMED4-205ENST00000481238 FAM90A2PQ658T7 463 aa17.89■□□□□ 0.45
TMED4-205ENST00000481238 SGMS2Q8NHU3 365 aa17.89■□□□□ 0.45
TMED4-205ENST00000481238 PFDN5Q99471 154 aa17.89■□□□□ 0.45
TMED4-205ENST00000481238 TGFAP01135 160 aa17.89■□□□□ 0.45
TMED4-205ENST00000481238 MAPK1IP1LQ8NDC0 245 aa17.89■□□□□ 0.45
TMED4-205ENST00000481238 MOB4Q9Y3A3 225 aa17.89■□□□□ 0.45
TMED4-205ENST00000481238 PUS1Q9Y606 427 aaKnown RBP eCLIP17.89■□□□□ 0.45
TMED4-205ENST00000481238 TMEM250H0YL14 139 aa17.88■□□□□ 0.45
TMED4-205ENST00000481238 TAS2R45P59539 299 aa17.88■□□□□ 0.45
TMED4-205ENST00000481238 SOX21Q9Y651 276 aaPredicted RBP17.88■□□□□ 0.45
TMED4-205ENST00000481238 FAM74A7A6NL05 159 aa17.87■□□□□ 0.45
TMED4-205ENST00000481238 H3BQ15 152 aa17.87■□□□□ 0.45
TMED4-205ENST00000481238 COX7A2P2O60397 106 aa17.87■□□□□ 0.45
TMED4-205ENST00000481238 CLN5O75503 358 aa17.87■□□□□ 0.45
TMED4-205ENST00000481238 IGLC1P0CG04 106 aa17.87■□□□□ 0.45
TMED4-205ENST00000481238 IGHV4-31P0DP07 118 aa17.87■□□□□ 0.45
TMED4-205ENST00000481238 FAM74A3Q4VXF1 159 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms