RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 WDR83OSQ9Y284 106 aa13.73□□□□□ -0.21
UPF3A-206ENST00000480362 H3BUA1 57 aa13.72□□□□□ -0.21
UPF3A-206ENST00000480362 BRI3O95415 125 aa13.72□□□□□ -0.21
UPF3A-206ENST00000480362 CFDP00746 253 aaPredicted RBP13.72□□□□□ -0.21
UPF3A-206ENST00000480362 IGLV1-40P01703 118 aa13.72□□□□□ -0.21
UPF3A-206ENST00000480362 TRGV3P03979 118 aa13.72□□□□□ -0.21
UPF3A-206ENST00000480362 MDKP21741 143 aaPredicted RBP13.72□□□□□ -0.21
UPF3A-206ENST00000480362 FGF7P21781 194 aa13.72□□□□□ -0.21
UPF3A-206ENST00000480362 RHOGP84095 191 aa13.72□□□□□ -0.21
UPF3A-206ENST00000480362 BTNL8Q6UX41 500 aa13.72□□□□□ -0.21
UPF3A-206ENST00000480362 TMEM144Q7Z5S9 345 aa13.72□□□□□ -0.21
UPF3A-206ENST00000480362 ZNF329Q86UD4 541 aa13.72□□□□□ -0.21
UPF3A-206ENST00000480362 NECAP1Q8NC96 275 aa13.72□□□□□ -0.21
UPF3A-206ENST00000480362 SCARB1Q8WTV0 552 aa13.72□□□□□ -0.21
UPF3A-206ENST00000480362 GINS3Q9BRX5 216 aa13.72□□□□□ -0.21
UPF3A-206ENST00000480362 S4R3C0 116 aa13.72□□□□□ -0.21
UPF3A-206ENST00000480362 F8P00451 2351 aa13.71□□□□□ -0.21
UPF3A-206ENST00000480362 PSMB11A5LHX3 300 aa13.71□□□□□ -0.21
UPF3A-206ENST00000480362 PF4V1P10720 104 aa13.71□□□□□ -0.21
UPF3A-206ENST00000480362 RND2P52198 227 aa13.71□□□□□ -0.21
UPF3A-206ENST00000480362 SLC35B1P78383 322 aa13.71□□□□□ -0.21
UPF3A-206ENST00000480362 IFITM2Q01629 132 aa13.71□□□□□ -0.21
UPF3A-206ENST00000480362 ACSM6Q6P461 480 aa13.71□□□□□ -0.21
UPF3A-206ENST00000480362 C10orf99Q6UWK7 81 aa13.71□□□□□ -0.21
UPF3A-206ENST00000480362 SLA2Q9H6Q3 261 aa13.71□□□□□ -0.21
UPF3A-206ENST00000480362 FN1P02751 2386 aaKnown RBP13.7□□□□□ -0.22
UPF3A-206ENST00000480362 MFSD2BA6NFX1 497 aa13.7□□□□□ -0.22
UPF3A-206ENST00000480362 IGHG4P01861 327 aa13.7□□□□□ -0.22
UPF3A-206ENST00000480362 ATP6V0CP27449 155 aa13.7□□□□□ -0.22
UPF3A-206ENST00000480362 TPPP2P59282 170 aa13.7□□□□□ -0.22
UPF3A-206ENST00000480362 RUNX1Q01196 453 aa13.7□□□□□ -0.22
UPF3A-206ENST00000480362 C15orf32Q32M92 178 aa13.7□□□□□ -0.22
UPF3A-206ENST00000480362 TEPPQ6URK8 271 aa13.7□□□□□ -0.22
UPF3A-206ENST00000480362 TEX261Q6UWH6 196 aa13.7□□□□□ -0.22
UPF3A-206ENST00000480362 CENPVQ7Z7K6 275 aaPredicted RBP13.7□□□□□ -0.22
UPF3A-206ENST00000480362 TMEM116Q8NCL8 245 aa13.7□□□□□ -0.22
UPF3A-206ENST00000480362 VN1R17PQ8TDU5 208 aa13.7□□□□□ -0.22
UPF3A-206ENST00000480362 RSG1Q9BU20 258 aa13.7□□□□□ -0.22
UPF3A-206ENST00000480362 KLK15Q9H2R5 256 aa13.7□□□□□ -0.22
UPF3A-206ENST00000480362 C16orf95Q9H693 158 aa13.7□□□□□ -0.22
UPF3A-206ENST00000480362 LSM4Q9Y4Z0 139 aaKnown RBP13.7□□□□□ -0.22
UPF3A-206ENST00000480362 RFNGQ9Y644 331 aa13.7□□□□□ -0.22
UPF3A-206ENST00000480362 FAM223BA6NKX1 122 aa13.69□□□□□ -0.22
UPF3A-206ENST00000480362 MPDU1O75352 247 aa13.69□□□□□ -0.22
UPF3A-206ENST00000480362 RAB9AP51151 201 aa13.69□□□□□ -0.22
UPF3A-206ENST00000480362 MFAP4P55083 255 aa13.69□□□□□ -0.22
UPF3A-206ENST00000480362 SRSF2Q01130 221 aaKnown RBP13.69□□□□□ -0.22
UPF3A-206ENST00000480362 ATP5G2Q06055 141 aa13.69□□□□□ -0.22
UPF3A-206ENST00000480362 FAM223AQ8IWN6 122 aa13.69□□□□□ -0.22
UPF3A-206ENST00000480362 OR4X1Q8NH49 305 aa13.69□□□□□ -0.22
UPF3A-206ENST00000480362 GNPNAT1Q96EK6 184 aaPredicted RBP13.69□□□□□ -0.22
UPF3A-206ENST00000480362 MGST2Q99735 147 aa13.69□□□□□ -0.22
UPF3A-206ENST00000480362 SH3BGRL3Q9H299 93 aa13.69□□□□□ -0.22
UPF3A-206ENST00000480362 C21orf62Q9NYP8 219 aa13.69□□□□□ -0.22
UPF3A-206ENST00000480362 IGKV1OR2-108A0A075B7D4 117 aa13.68□□□□□ -0.22
UPF3A-206ENST00000480362 TMEM89A2RUT3 159 aa13.68□□□□□ -0.22
UPF3A-206ENST00000480362 NDUFA7O95182 113 aa13.68□□□□□ -0.22
UPF3A-206ENST00000480362 IGHV3-23P01764 117 aa13.68□□□□□ -0.22
UPF3A-206ENST00000480362 SPP1P10451 314 aa13.68□□□□□ -0.22
UPF3A-206ENST00000480362 TEX38Q6PEX7 206 aa13.68□□□□□ -0.22
UPF3A-206ENST00000480362 ALKAL2Q6UX46 152 aa13.68□□□□□ -0.22
UPF3A-206ENST00000480362 LCNL1Q6ZST4 164 aa13.68□□□□□ -0.22
UPF3A-206ENST00000480362 ZNF709Q8N972 641 aa13.68□□□□□ -0.22
UPF3A-206ENST00000480362 THAP8Q8NA92 274 aa13.68□□□□□ -0.22
UPF3A-206ENST00000480362 CXorf58Q96LI9 332 aa13.68□□□□□ -0.22
UPF3A-206ENST00000480362 NPCDR1Q9BY65 106 aa13.68□□□□□ -0.22
UPF3A-206ENST00000480362 SLC25A32Q9H2D1 315 aa13.68□□□□□ -0.22
UPF3A-206ENST00000480362 IGKV1D-37A0A075B6S9 117 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 ZFP92A6NM28 416 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 AGPAT2O15120 278 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 CLN5O75503 358 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 SEC11BP0C7V7 166 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 PSMB8P28062 276 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 OR10J1P30954 320 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 NPBWR1P48145 328 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 CAMLGP49069 296 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 RAB31Q13636 194 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 Q56UQ5 140 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 ZNF680Q8NEM1 530 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 OR2G3Q8NGZ4 309 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 TMED6Q8WW62 240 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 EEF1AKMT3Q96AZ1 226 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 PHYHIPLQ96FC7 376 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 USMG5Q96IX5 58 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 TIMM9Q9Y5J7 89 aa13.67□□□□□ -0.22
UPF3A-206ENST00000480362 C17orf112F2Z3M2 114 aa13.66□□□□□ -0.22
UPF3A-206ENST00000480362 F8W735 103 aaPredicted RBP13.66□□□□□ -0.22
UPF3A-206ENST00000480362 ELANEP08246 267 aa13.66□□□□□ -0.22
UPF3A-206ENST00000480362 FOXE3Q13461 319 aa13.66□□□□□ -0.22
UPF3A-206ENST00000480362 EIF5AL1Q6IS14 154 aaKnown RBP13.66□□□□□ -0.22
UPF3A-206ENST00000480362 KLHDC1Q8N7A1 406 aa13.66□□□□□ -0.22
UPF3A-206ENST00000480362 LINC01006Q8NI28 216 aa13.66□□□□□ -0.22
UPF3A-206ENST00000480362 ZNF502Q8TBZ5 544 aa13.66□□□□□ -0.22
UPF3A-206ENST00000480362 TXN2Q99757 166 aa13.66□□□□□ -0.22
UPF3A-206ENST00000480362 PSMG3Q9BT73 122 aaPredicted RBP13.66□□□□□ -0.22
UPF3A-206ENST00000480362 GGTLC1Q9BX51 225 aa13.66□□□□□ -0.22
UPF3A-206ENST00000480362 PLA2G2EQ9NZK7 142 aa13.66□□□□□ -0.22
UPF3A-206ENST00000480362 MTORP42345 2549 aa13.66□□□□□ -0.22
UPF3A-206ENST00000480362 TRBV7-1A0A0A6YYK4 115 aa13.65□□□□□ -0.22
UPF3A-206ENST00000480362 A0A0G2JLM5 398 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms