RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 RD3LP0DJH9 198 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 OR10J1P30954 320 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 FCGR2CP31995 323 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 HRH1P35367 487 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 RPS10P46783 165 aaKnown RBP4.96□□□□□ -1.62
SF3B1-209ENST00000479532 ZNF137PP52743 207 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 UBE2G2P60604 165 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 ZNF816Q0VGE8 651 aaPredicted RBP4.96□□□□□ -1.62
SF3B1-209ENST00000479532 HES1Q14469 280 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 ELOBQ15370 118 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 AKIRIN2Q53H80 203 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 VAX1Q5SQQ9 334 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 STEAP1BQ6NZ63 245 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 PRSS54Q6PEW0 395 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 Q6YL49 198 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 LHFPL4Q7Z7J7 247 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 LYG2Q86SG7 212 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 MOB3BQ86TA1 216 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 SLC25A42Q86VD7 318 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 ZNF645Q8N7E2 425 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 SLC35G3Q8N808 338 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 ZNF439Q8NDP4 499 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 OR4C16Q8NGL9 310 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 AKR1E2Q96JD6 320 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 MIEN1Q9BRT3 115 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 SCRT1Q9BWW7 348 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 CTDSP1Q9GZU7 261 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 MAGT1Q9H0U3 335 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 KLK11Q9UBX7 282 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 HIVEP1P15822 2718 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 MAST4O15021 2626 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 CSPG4Q6UVK1 2322 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 IGKV1D-8A0A087WSZ0 117 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 SAA2-SAA4A0A096LPE2 208 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 IGHV1-3A0A0C4DH29 117 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 MDFIC2A0A1B0GVS7 189 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 DNAJC9-AS1A6NH13 148 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 LINC00473A8K010 186 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 RNF212BA8MTL3 300 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 UMAD1C9J7I0 102 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 H0YIZ8 118 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 LY6LH3BQJ8 138 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 H3BUX3 64 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 CLDN34H7C241 214 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 K7EPK0 472 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 M0R1X1 148 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 KCNAB3O43448 404 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 HPRT1P00492 218 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 PPYP01298 95 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 APOA2P02652 100 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 CD3DP04234 171 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 SNRNP70P08621 437 aaKnown RBP4.95□□□□□ -1.62
SF3B1-209ENST00000479532 SNRPCP09234 159 aaKnown RBP4.95□□□□□ -1.62
SF3B1-209ENST00000479532 SAA2P0DJI9 122 aaPredicted RBP4.95□□□□□ -1.62
SF3B1-209ENST00000479532 FABP4P15090 132 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 PGAM2P15259 253 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 AADACP22760 399 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 GNRHRP30968 328 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 MC5RP33032 325 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 THBS3P49746 956 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 DYNLT3P51808 116 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 FXYD4P59646 89 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 HILS1P60008 231 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 RPL15P61313 204 aaKnown RBP4.95□□□□□ -1.62
SF3B1-209ENST00000479532 UBE2V1Q13404 147 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 MSMO1Q15800 293 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 ACOT6Q3I5F7 207 aaPredicted RBP4.95□□□□□ -1.62
SF3B1-209ENST00000479532 ACSM6Q6P461 480 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 ZNF833PQ6ZTB9 187 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 C16orf82Q7Z2V1 217 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 TMED4Q7Z7H5 227 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 CMTM1Q8IZ96 169 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 FAM71E2Q8N5Q1 922 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 SECTM1Q8WVN6 248 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 RTN4IP1Q8WWV3 396 aaPredicted RBP4.95□□□□□ -1.62
SF3B1-209ENST00000479532 ABHD14BQ96IU4 210 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 ADTRPQ96IZ2 230 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 SCGB3A2Q96PL1 93 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 TXN2Q99757 166 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 SLC5A7Q9GZV3 580 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 IFI27L2Q9H2X8 130 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 DNAJC4Q9NNZ3 241 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 TNFRSF19Q9NS68 423 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 SERTAD4Q9NUC0 356 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 SMPXQ9UHP9 88 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 VPREB3Q9UKI3 123 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 RNF150Q9ULK6 438 aa4.95□□□□□ -1.62
SF3B1-209ENST00000479532 F6UZH7 168 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 K7ERU9 68 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 M0R036 132 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 TIMM23O14925 209 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 AMBPP02760 352 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 HSPB1P04792 205 aaKnown RBP4.94□□□□□ -1.62
SF3B1-209ENST00000479532 CD1BP29016 333 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 KIR2DS2P43631 304 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 IER3P46695 156 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 REG1BP48304 166 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 AKR1C2P52895 323 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 RIPPLY3P57055 190 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 AKR1C1Q04828 323 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms