RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 SNHG12Q9BXW3 62 aa4.06□□□□□ -1.76
RC3H1-204ENST00000479099 DEFB126Q9BYW3 111 aa4.06□□□□□ -1.76
RC3H1-204ENST00000479099 ZNF835Q9Y2P0 537 aa4.06□□□□□ -1.76
RC3H1-204ENST00000479099 DSPPQ9NZW4 1301 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 ODAMA1E959 279 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 C1orf196B1AJZ1 125 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 TMEM256-PLSCR3K7ERE1 68 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 NAPSAO96009 420 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 IGLV2-11P01706 119 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 CFC1BP0CG36 223 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 FABP2P12104 132 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 S100A4P26447 101 aaKnown RBP4.05□□□□□ -1.76
RC3H1-204ENST00000479099 CSN1S1P47710 185 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 FOXA3P55318 350 aaPredicted RBP4.05□□□□□ -1.76
RC3H1-204ENST00000479099 KRTAP10-6P60371 365 aaPredicted RBP4.05□□□□□ -1.76
RC3H1-204ENST00000479099 QRFPP83859 136 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 RHOGP84095 191 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 MEF2BQ02080 365 aaPredicted RBP4.05□□□□□ -1.76
RC3H1-204ENST00000479099 LINC01554Q52M75 96 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 TRAPPC6BQ86SZ2 158 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 CEND1Q8N111 149 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 PACRGLQ8N7B6 248 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 OR10G2Q8NGC3 310 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 NAT14Q8WUY8 206 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 ITLN2Q8WWU7 325 aaPredicted RBP4.05□□□□□ -1.76
RC3H1-204ENST00000479099 OPRPNQ99935 248 aaPredicted RBP4.05□□□□□ -1.76
RC3H1-204ENST00000479099 MRPL57Q9BQC6 102 aaKnown RBP4.05□□□□□ -1.76
RC3H1-204ENST00000479099 NAA38Q9BRA0 125 aaKnown RBP4.05□□□□□ -1.76
RC3H1-204ENST00000479099 MARCOQ9UEW3 520 aaPredicted RBP4.05□□□□□ -1.76
RC3H1-204ENST00000479099 CELA1Q9UNI1 258 aa4.05□□□□□ -1.76
RC3H1-204ENST00000479099 GPATCH8Q9UKJ3 1502 aaKnown RBP4.05□□□□□ -1.76
RC3H1-204ENST00000479099 KDM6AO15550 1401 aaPredicted RBP4.04□□□□□ -1.76
RC3H1-204ENST00000479099 MYH7BA7E2Y1 1941 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 IGHV3-21A0A0B4J1V1 117 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 TRAV13-1A0A0B4J241 112 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 ZNF727A8MUV8 499 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 H3BMG7 143 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 C19orf84I3L1E1 186 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 CGB3P0DN86 165 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 CGB7P0DN87 165 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 CRHBPP24387 322 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 CRYBB3P26998 211 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 AKR1C2P52895 323 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 YPEL3P61236 119 aaPredicted RBP4.04□□□□□ -1.76
RC3H1-204ENST00000479099 UBE2BP63146 152 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 BTG2P78543 158 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 PLGLB1Q02325 96 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 FAM104BQ5XKR9 115 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 AMTNQ6UX39 209 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 C9orf62Q8N4C0 152 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 C11orf42Q8N5U0 333 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 OR10AC1Q8NH08 325 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 SLC25A46Q96AG3 418 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 PLA2G12AQ9BZM1 189 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 FAM60AQ9NP50 221 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 CCDC167Q9P0B6 97 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 PHLDA3Q9Y5J5 127 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 SYNJ1O43426 1573 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 PZPP20742 1482 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 NCAPD3P42695 1498 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 PCNX3Q9H6A9 2034 aa4.04□□□□□ -1.76
RC3H1-204ENST00000479099 IGKV1-9A0A0C4DH69 117 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 FAM236AA0A1B0GUQ0 79 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 FAM236BA0A1B0GV22 79 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 BBIP1A8MTZ0 92 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 UBFD1O14562 309 aaKnown RBP4.03□□□□□ -1.76
RC3H1-204ENST00000479099 SNAPC5O75971 98 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 KRASP01116 189 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 TLX1NBP0CAT3 122 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 T-ENOLP0DO92 83 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 SRP14P37108 136 aaKnown RBP4.03□□□□□ -1.76
RC3H1-204ENST00000479099 EIF5AP63241 154 aaKnown RBP4.03□□□□□ -1.76
RC3H1-204ENST00000479099 DIAPH2-AS1Q14236 149 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 MRPL51Q4U2R6 128 aaKnown RBP4.03□□□□□ -1.76
RC3H1-204ENST00000479099 MEIG1Q5JSS6 88 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 COL5A1-AS1Q5SY13 56 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 FAAP20Q6NZ36 180 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 NTM-AS1Q6ZSK4 140 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 RPS19BP1Q86WX3 136 aaKnown RBP4.03□□□□□ -1.76
RC3H1-204ENST00000479099 AMN1Q8IY45 258 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 TEX29Q8N6K0 151 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 ZFAND2AQ8N6M9 145 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 CD177Q8N6Q3 437 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 APCDD1LQ8NCL9 501 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 OR5D14Q8NGL3 314 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 OR5H6Q8NGV6 325 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 DEDD2Q8WXF8 326 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 ADAT1Q9BUB4 502 aaKnown RBP4.03□□□□□ -1.76
RC3H1-204ENST00000479099 MRPL32Q9BYC8 188 aaKnown RBP4.03□□□□□ -1.76
RC3H1-204ENST00000479099 BANF2Q9H503 90 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 RERGLQ9H628 205 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 SDF2L1Q9HCN8 221 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 ZNF586Q9NXT0 402 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 MED14O60244 1454 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 MYOM2P54296 1465 aa4.03□□□□□ -1.76
RC3H1-204ENST00000479099 MAST2Q6P0Q8 1798 aa4.02□□□□□ -1.77
RC3H1-204ENST00000479099 TRAV27A0A087WT01 109 aa4.02□□□□□ -1.77
RC3H1-204ENST00000479099 ZFP92A6NM28 416 aa4.02□□□□□ -1.77
RC3H1-204ENST00000479099 K7ERS5 55 aa4.02□□□□□ -1.77
RC3H1-204ENST00000479099 CDC42EP2O14613 210 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms