RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 IGHV3-64DA0A0J9YX35 117 aa17.35■□□□□ 0.37
SDF4-206ENST00000478938 LILRA5A6NI73 299 aa17.35■□□□□ 0.37
SDF4-206ENST00000478938 INSL3P51460 131 aa17.35■□□□□ 0.37
SDF4-206ENST00000478938 TMEM177Q53S58 311 aa17.35■□□□□ 0.37
SDF4-206ENST00000478938 ARPC1AQ92747 370 aa17.35■□□□□ 0.37
SDF4-206ENST00000478938 MPC1Q9Y5U8 109 aa17.35■□□□□ 0.37
SDF4-206ENST00000478938 C12orf77C9JDV5 145 aa17.34■□□□□ 0.37
SDF4-206ENST00000478938 ETDBQ3ZM63 59 aa17.34■□□□□ 0.37
SDF4-206ENST00000478938 SHISA2Q6UWI4 295 aa17.34■□□□□ 0.37
SDF4-206ENST00000478938 PIP4P2Q8N4L2 257 aa17.34■□□□□ 0.37
SDF4-206ENST00000478938 GALMQ96C23 342 aa17.34■□□□□ 0.37
SDF4-206ENST00000478938 ZNF747Q9BV97 191 aa17.34■□□□□ 0.37
SDF4-206ENST00000478938 CEBPDP49716 269 aaPredicted RBP17.34■□□□□ 0.37
SDF4-206ENST00000478938 PGLYRP4Q96LB8 373 aa17.34■□□□□ 0.37
SDF4-206ENST00000478938 SGK494Q96LW2 274 aa17.34■□□□□ 0.37
SDF4-206ENST00000478938 FAM234AQ9H0X4 552 aa17.34■□□□□ 0.37
SDF4-206ENST00000478938 IGHV3-43A0A0B4J1X8 118 aa17.33■□□□□ 0.36
SDF4-206ENST00000478938 TSPAN13O95857 204 aa17.33■□□□□ 0.36
SDF4-206ENST00000478938 SMIM13P0DJ93 91 aa17.33■□□□□ 0.36
SDF4-206ENST00000478938 IGHV3-43DP0DP04 118 aa17.33■□□□□ 0.36
SDF4-206ENST00000478938 OR10D3Q8NH80 312 aa17.33■□□□□ 0.36
SDF4-206ENST00000478938 Q8TCH9 128 aa17.33■□□□□ 0.36
SDF4-206ENST00000478938 OBP2AQ9NY56 170 aa17.33■□□□□ 0.36
SDF4-206ENST00000478938 KLF13Q9Y2Y9 288 aaPredicted RBP17.33■□□□□ 0.36
SDF4-206ENST00000478938 CHCHD2Q9Y6H1 151 aaPredicted RBP17.33■□□□□ 0.36
SDF4-206ENST00000478938 TRANK1O15050 2925 aa17.33■□□□□ 0.36
SDF4-206ENST00000478938 KBTBD11-OT1A0A1B0GTJ5 212 aa17.33■□□□□ 0.36
SDF4-206ENST00000478938 DEFB108AA8MXU0 73 aa17.33■□□□□ 0.36
SDF4-206ENST00000478938 MRPL16Q9NX20 251 aaKnown RBP17.33■□□□□ 0.36
SDF4-206ENST00000478938 FNDC10F2Z333 226 aa17.32■□□□□ 0.36
SDF4-206ENST00000478938 MGST3O14880 152 aa17.32■□□□□ 0.36
SDF4-206ENST00000478938 FCGR3BO75015 233 aa17.32■□□□□ 0.36
SDF4-206ENST00000478938 CR1LQ2VPA4 569 aa17.32■□□□□ 0.36
SDF4-206ENST00000478938 MOB3BQ86TA1 216 aa17.32■□□□□ 0.36
SDF4-206ENST00000478938 PCP2Q8IVA1 136 aa17.32■□□□□ 0.36
SDF4-206ENST00000478938 MTURNQ8N3F0 131 aa17.32■□□□□ 0.36
SDF4-206ENST00000478938 AMMECR1Q9Y4X0 333 aaPredicted RBP17.32■□□□□ 0.36
SDF4-206ENST00000478938 A0A096LPE4 126 aa17.32■□□□□ 0.36
SDF4-206ENST00000478938 A0A1W2PPZ6 126 aa17.32■□□□□ 0.36
SDF4-206ENST00000478938 OR9G4Q8NGQ1 327 aa17.32■□□□□ 0.36
SDF4-206ENST00000478938 CHRNA10Q9GZZ6 450 aa17.32■□□□□ 0.36
SDF4-206ENST00000478938 IL23AQ9NPF7 189 aa17.32■□□□□ 0.36
SDF4-206ENST00000478938 TRAV5A0A0B4J249 113 aa17.31■□□□□ 0.36
SDF4-206ENST00000478938 A8MWL6 223 aa17.31■□□□□ 0.36
SDF4-206ENST00000478938 ZFAND5O76080 213 aa17.31■□□□□ 0.36
SDF4-206ENST00000478938 GNG3P63215 75 aa17.31■□□□□ 0.36
SDF4-206ENST00000478938 PPP1R32Q7Z5V6 425 aa17.31■□□□□ 0.36
SDF4-206ENST00000478938 OR4X2Q8NGF9 303 aa17.31■□□□□ 0.36
SDF4-206ENST00000478938 ZNF479Q96JC4 524 aa17.31■□□□□ 0.36
SDF4-206ENST00000478938 PGPEP1Q9NXJ5 209 aa17.31■□□□□ 0.36
SDF4-206ENST00000478938 FXYD2P54710 66 aa17.31■□□□□ 0.36
SDF4-206ENST00000478938 OR8A1Q8NGG7 326 aa17.31■□□□□ 0.36
SDF4-206ENST00000478938 GTSF1Q8WW33 167 aa17.31■□□□□ 0.36
SDF4-206ENST00000478938 FRYQ5TBA9 3013 aa17.3■□□□□ 0.36
SDF4-206ENST00000478938 NKX2-8O15522 239 aa17.3■□□□□ 0.36
SDF4-206ENST00000478938 GCSHP23434 173 aa17.3■□□□□ 0.36
SDF4-206ENST00000478938 DEFB133Q30KQ1 61 aa17.3■□□□□ 0.36
SDF4-206ENST00000478938 MORN5Q5VZ52 161 aa17.3■□□□□ 0.36
SDF4-206ENST00000478938 PRRG4Q9BZD6 226 aa17.3■□□□□ 0.36
SDF4-206ENST00000478938 C7orf69Q9H7B7 122 aa17.3■□□□□ 0.36
SDF4-206ENST00000478938 TNRC6BQ9UPQ9 1833 aaKnown RBP17.3■□□□□ 0.36
SDF4-206ENST00000478938 C2CD4DB7Z1M9 353 aa17.3■□□□□ 0.36
SDF4-206ENST00000478938 MT-CO3P00414 261 aa17.3■□□□□ 0.36
SDF4-206ENST00000478938 TAS2R45P59539 299 aa17.3■□□□□ 0.36
SDF4-206ENST00000478938 UBE2L3P68036 154 aaKnown RBP17.3■□□□□ 0.36
SDF4-206ENST00000478938 TCF19Q9Y242 345 aa17.3■□□□□ 0.36
SDF4-206ENST00000478938 DUTP33316 252 aaKnown RBP17.29■□□□□ 0.36
SDF4-206ENST00000478938 NMUP48645 174 aa17.29■□□□□ 0.36
SDF4-206ENST00000478938 WDR31Q8NA23 367 aa17.29■□□□□ 0.36
SDF4-206ENST00000478938 GCSAMQ8N6F7 178 aa17.29■□□□□ 0.36
SDF4-206ENST00000478938 ZNF716A6NP11 495 aa17.28■□□□□ 0.36
SDF4-206ENST00000478938 APOHP02749 345 aaPredicted RBP17.28■□□□□ 0.36
SDF4-206ENST00000478938 CYC1P08574 325 aa17.28■□□□□ 0.36
SDF4-206ENST00000478938 GNG5P63218 68 aa17.28■□□□□ 0.36
SDF4-206ENST00000478938 CFHR1Q03591 330 aa17.28■□□□□ 0.36
SDF4-206ENST00000478938 RNF183Q96D59 192 aa17.28■□□□□ 0.36
SDF4-206ENST00000478938 PSG8Q9UQ74 426 aa17.28■□□□□ 0.36
SDF4-206ENST00000478938 SPTBN5Q9NRC6 3674 aaKnown RBP17.28■□□□□ 0.36
SDF4-206ENST00000478938 TEX50A0A1B0GTY4 177 aa17.28■□□□□ 0.36
SDF4-206ENST00000478938 PEX7O00628 323 aa17.28■□□□□ 0.36
SDF4-206ENST00000478938 CHEK1O14757 476 aa17.28■□□□□ 0.36
SDF4-206ENST00000478938 DKK1O94907 266 aa17.28■□□□□ 0.36
SDF4-206ENST00000478938 LINC00322Q6ZN03 302 aaPredicted RBP17.28■□□□□ 0.36
SDF4-206ENST00000478938 ZADH2Q8N4Q0 377 aa17.28■□□□□ 0.36
SDF4-206ENST00000478938 DPF1Q92782 380 aa17.28■□□□□ 0.36
SDF4-206ENST00000478938 FGF21Q9NSA1 209 aa17.28■□□□□ 0.36
SDF4-206ENST00000478938 BRWD1Q9NSI6 2320 aa17.27■□□□□ 0.36
SDF4-206ENST00000478938 IGKV1OR2-108A0A075B7D4 117 aa17.27■□□□□ 0.36
SDF4-206ENST00000478938 PRR33A8MZF0 331 aa17.27■□□□□ 0.36
SDF4-206ENST00000478938 K7EMI3 77 aa17.27■□□□□ 0.36
SDF4-206ENST00000478938 PSPNO60542 156 aa17.27■□□□□ 0.36
SDF4-206ENST00000478938 FOXF2Q12947 444 aa17.27■□□□□ 0.36
SDF4-206ENST00000478938 NDFIP1Q9BT67 221 aa17.27■□□□□ 0.36
SDF4-206ENST00000478938 B4GALT7Q9UBV7 327 aa17.27■□□□□ 0.36
SDF4-206ENST00000478938 FREM1Q5H8C1 2179 aa17.27■□□□□ 0.35
SDF4-206ENST00000478938 NBEAQ8NFP9 2946 aa17.27■□□□□ 0.35
SDF4-206ENST00000478938 A0A1W2PRD5 423 aa17.27■□□□□ 0.35
SDF4-206ENST00000478938 A0A1W2PRF3 423 aa17.27■□□□□ 0.35
SDF4-206ENST00000478938 A0A1W2PRM7 423 aa17.27■□□□□ 0.35
SDF4-206ENST00000478938 RAC3P60763 192 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms