RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 CYTL1Q9NRR1 136 aa11.73□□□□□ -0.53
NPHP4-208ENST00000478423 PHLDA3Q9Y5J5 127 aa11.73□□□□□ -0.53
NPHP4-208ENST00000478423 LINC00473A8K010 186 aa11.73□□□□□ -0.53
NPHP4-208ENST00000478423 IGHV3-11P01762 117 aa11.73□□□□□ -0.53
NPHP4-208ENST00000478423 SAPCD1Q5SSQ6 148 aa11.73□□□□□ -0.53
NPHP4-208ENST00000478423 FAM169BQ8N8A8 192 aa11.73□□□□□ -0.53
NPHP4-208ENST00000478423 Q6ZS49 121 aa11.73□□□□□ -0.53
NPHP4-208ENST00000478423 NUP37Q8NFH4 326 aa11.73□□□□□ -0.53
NPHP4-208ENST00000478423 BET1LQ9NYM9 111 aa11.73□□□□□ -0.53
NPHP4-208ENST00000478423 IGHV2-26A0A0B4J1V2 119 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 M0R143 59 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 VSIRQ9H7M9 311 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 ZNF503-AS2A6NEH8 195 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 C1QTNF9BB2RNN3 333 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 IGKV3-20P01619 116 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 TMEM97Q5BJF2 176 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 KIF26AQ9ULI4 1882 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-208ENST00000478423 A0A0G2JLM5 398 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 FAM90A9PA6NNJ1 464 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 GNLYP22749 145 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 HIST1H1AQ02539 215 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-208ENST00000478423 IGFL3Q6UXB1 125 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 FOXA3P55318 350 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-208ENST00000478423 C2orf83Q53S99 150 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 LEMD1Q68G75 181 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 SCGB1D4Q6XE38 83 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 ZNF841Q6ZN19 808 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 DDB2Q92466 427 aa11.72□□□□□ -0.53
NPHP4-208ENST00000478423 NCOA6Q14686 2063 aaPredicted RBP11.71□□□□□ -0.53
NPHP4-208ENST00000478423 IGHV3OR16-12A0A075B7B8 117 aa11.71□□□□□ -0.53
NPHP4-208ENST00000478423 TRAV3A0A0B4J244 114 aa11.71□□□□□ -0.53
NPHP4-208ENST00000478423 CDX1P47902 265 aaPredicted RBP11.71□□□□□ -0.53
NPHP4-208ENST00000478423 RPS20P60866 119 aaKnown RBP11.71□□□□□ -0.53
NPHP4-208ENST00000478423 EFNB3Q15768 340 aa11.71□□□□□ -0.53
NPHP4-208ENST00000478423 TREML4Q6UXN2 200 aa11.71□□□□□ -0.53
NPHP4-208ENST00000478423 TNFSF13O75888 250 aa11.71□□□□□ -0.53
NPHP4-208ENST00000478423 LEPROTL1O95214 131 aa11.71□□□□□ -0.53
NPHP4-208ENST00000478423 PIP4P1Q86T03 277 aa11.71□□□□□ -0.53
NPHP4-208ENST00000478423 GAFA1Q96PS6 74 aa11.71□□□□□ -0.53
NPHP4-208ENST00000478423 CDC42EP3Q9UKI2 254 aa11.71□□□□□ -0.53
NPHP4-208ENST00000478423 IGKV1-6A0A0C4DH72 117 aa11.71□□□□□ -0.54
NPHP4-208ENST00000478423 BTF3P20290 206 aaKnown RBP11.71□□□□□ -0.54
NPHP4-208ENST00000478423 EFNA4P52798 201 aa11.71□□□□□ -0.54
NPHP4-208ENST00000478423 RPL23P62829 140 aaKnown RBP11.71□□□□□ -0.54
NPHP4-208ENST00000478423 WNK1Q9H4A3 2382 aa11.71□□□□□ -0.54
NPHP4-208ENST00000478423 A0A0G2JRQ6 117 aa11.7□□□□□ -0.54
NPHP4-208ENST00000478423 Q6ZRM9 215 aa11.7□□□□□ -0.54
NPHP4-208ENST00000478423 ZNF257Q9Y2Q1 563 aa11.7□□□□□ -0.54
NPHP4-208ENST00000478423 RFNGQ9Y644 331 aa11.7□□□□□ -0.54
NPHP4-208ENST00000478423 CEP350Q5VT06 3117 aa11.7□□□□□ -0.54
NPHP4-208ENST00000478423 PYYP10082 97 aa11.7□□□□□ -0.54
NPHP4-208ENST00000478423 FOSL1P15407 271 aa11.7□□□□□ -0.54
NPHP4-208ENST00000478423 ST6GALNAC3Q8NDV1 305 aa11.7□□□□□ -0.54
NPHP4-208ENST00000478423 C2orf16Q68DN1 1984 aa11.7□□□□□ -0.54
NPHP4-208ENST00000478423 TRAV40A0A0B4J280 105 aa11.7□□□□□ -0.54
NPHP4-208ENST00000478423 HLA-DRB1P01911 266 aa11.7□□□□□ -0.54
NPHP4-208ENST00000478423 PKIAP61925 76 aa11.7□□□□□ -0.54
NPHP4-208ENST00000478423 MBNL3Q9NUK0 354 aaKnown RBP11.7□□□□□ -0.54
NPHP4-208ENST00000478423 TCRBV4S1A1TA0A5B7 111 aa11.7□□□□□ -0.54
NPHP4-208ENST00000478423 RPP25LQ8N5L8 163 aaKnown RBP11.7□□□□□ -0.54
NPHP4-208ENST00000478423 GGTLC1Q9BX51 225 aa11.7□□□□□ -0.54
NPHP4-208ENST00000478423 E7EQL1 145 aa11.69□□□□□ -0.54
NPHP4-208ENST00000478423 TCTAP57738 103 aa11.69□□□□□ -0.54
NPHP4-208ENST00000478423 RNF151Q2KHN1 245 aa11.69□□□□□ -0.54
NPHP4-208ENST00000478423 LYPD2Q6UXB3 125 aa11.69□□□□□ -0.54
NPHP4-208ENST00000478423 TMEM14EPQ6UXP3 125 aa11.69□□□□□ -0.54
NPHP4-208ENST00000478423 MBD3L1Q8WWY6 194 aa11.69□□□□□ -0.54
NPHP4-208ENST00000478423 RNF125Q96EQ8 232 aa11.69□□□□□ -0.54
NPHP4-208ENST00000478423 Q9H3A6 140 aa11.69□□□□□ -0.54
NPHP4-208ENST00000478423 PLXNB3Q9ULL4 1909 aa11.69□□□□□ -0.54
NPHP4-208ENST00000478423 SCGB1C2P0DMR2 95 aa11.69□□□□□ -0.54
NPHP4-208ENST00000478423 SNRPD3P62318 126 aaKnown RBP11.69□□□□□ -0.54
NPHP4-208ENST00000478423 RHOGP84095 191 aa11.69□□□□□ -0.54
NPHP4-208ENST00000478423 PRSS8Q16651 343 aa11.69□□□□□ -0.54
NPHP4-208ENST00000478423 Q6ZR03 302 aa11.69□□□□□ -0.54
NPHP4-208ENST00000478423 GPR82Q96P67 336 aa11.69□□□□□ -0.54
NPHP4-208ENST00000478423 IL36BQ9NZH7 164 aa11.69□□□□□ -0.54
NPHP4-208ENST00000478423 PGPEP1LA6NFU8 196 aa11.68□□□□□ -0.54
NPHP4-208ENST00000478423 IFITM10A6NMD0 228 aa11.68□□□□□ -0.54
NPHP4-208ENST00000478423 KLRD1Q13241 179 aa11.68□□□□□ -0.54
NPHP4-208ENST00000478423 LINC00527Q9UJ94 153 aa11.68□□□□□ -0.54
NPHP4-208ENST00000478423 C1QTNF9P0C862 333 aa11.68□□□□□ -0.54
NPHP4-208ENST00000478423 TAS2R60P59551 318 aa11.68□□□□□ -0.54
NPHP4-208ENST00000478423 HBBP68871 147 aa11.68□□□□□ -0.54
NPHP4-208ENST00000478423 COL8A2P25067 703 aa11.68□□□□□ -0.54
NPHP4-208ENST00000478423 TCF24Q7RTU0 167 aa11.68□□□□□ -0.54
NPHP4-208ENST00000478423 IMMP2LQ96T52 175 aa11.68□□□□□ -0.54
NPHP4-208ENST00000478423 PCDH15Q96QU1 1955 aa11.68□□□□□ -0.54
NPHP4-208ENST00000478423 A0A087WWC5 75 aa11.68□□□□□ -0.54
NPHP4-208ENST00000478423 TRBV9A0A0B4J1U6 114 aa11.68□□□□□ -0.54
NPHP4-208ENST00000478423 MYOD1P15172 320 aa11.68□□□□□ -0.54
NPHP4-208ENST00000478423 WT1P19544 449 aaPredicted RBP11.68□□□□□ -0.54
NPHP4-208ENST00000478423 SLC25A48Q6ZT89 311 aaKnown RBP11.68□□□□□ -0.54
NPHP4-208ENST00000478423 IGHV1-3A0A0C4DH29 117 aa11.67□□□□□ -0.54
NPHP4-208ENST00000478423 HERVK_113P61574 105 aa11.67□□□□□ -0.54
NPHP4-208ENST00000478423 MUC21A0A0G2JKD1 596 aa11.67□□□□□ -0.54
NPHP4-208ENST00000478423 MUC21A0A140T8X8 626 aa11.67□□□□□ -0.54
NPHP4-208ENST00000478423 A0A1W2PRE2 83 aa11.67□□□□□ -0.54
NPHP4-208ENST00000478423 MUC21Q5SSG8 566 aa11.67□□□□□ -0.54
NPHP4-208ENST00000478423 OR4C5Q8NGB2 326 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms