RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 CNIH1O95406 144 aa9.97□□□□□ -0.81
TRAF3IP3-213ENST00000478359 SPATA31B1PQ5VZV4 182 aa9.97□□□□□ -0.81
TRAF3IP3-213ENST00000478359 KCNIP4Q6PIL6 250 aa9.97□□□□□ -0.81
TRAF3IP3-213ENST00000478359 LINC01551Q86U37 167 aa9.97□□□□□ -0.81
TRAF3IP3-213ENST00000478359 OR51G1Q8NGK1 321 aa9.97□□□□□ -0.81
TRAF3IP3-213ENST00000478359 C2CD4CQ8TF44 421 aa9.97□□□□□ -0.81
TRAF3IP3-213ENST00000478359 TMEM37Q8WXS4 190 aa9.97□□□□□ -0.81
TRAF3IP3-213ENST00000478359 MISP3Q96FF7 219 aa9.97□□□□□ -0.81
TRAF3IP3-213ENST00000478359 FAM210BQ96KR6 192 aa9.97□□□□□ -0.81
TRAF3IP3-213ENST00000478359 IMMP2LQ96T52 175 aa9.97□□□□□ -0.81
TRAF3IP3-213ENST00000478359 SIRPDQ9H106 197 aa9.97□□□□□ -0.81
TRAF3IP3-213ENST00000478359 TNFRSF19Q9NS68 423 aa9.97□□□□□ -0.81
TRAF3IP3-213ENST00000478359 URGCP-MRPS24S4R325 110 aa9.97□□□□□ -0.81
TRAF3IP3-213ENST00000478359 ACACBO00763 2458 aa9.97□□□□□ -0.81
TRAF3IP3-213ENST00000478359 SMG1Q96Q15 3661 aaKnown RBP9.96□□□□□ -0.81
TRAF3IP3-213ENST00000478359 FABP1P07148 127 aa9.96□□□□□ -0.81
TRAF3IP3-213ENST00000478359 NPPCP23582 126 aa9.96□□□□□ -0.81
TRAF3IP3-213ENST00000478359 SRP14P37108 136 aaKnown RBP9.96□□□□□ -0.81
TRAF3IP3-213ENST00000478359 PDLIM4P50479 330 aa9.96□□□□□ -0.81
TRAF3IP3-213ENST00000478359 EBI3Q14213 229 aa9.96□□□□□ -0.81
TRAF3IP3-213ENST00000478359 ZFP82Q8N141 532 aa9.96□□□□□ -0.81
TRAF3IP3-213ENST00000478359 TCEAL7Q9BRU2 100 aa9.96□□□□□ -0.81
TRAF3IP3-213ENST00000478359 LPAR2Q9HBW0 351 aa9.96□□□□□ -0.81
TRAF3IP3-213ENST00000478359 YTHDF2Q9Y5A9 579 aaKnown RBP9.96□□□□□ -0.81
TRAF3IP3-213ENST00000478359 HILPDAQ9Y5L2 63 aa9.96□□□□□ -0.81
TRAF3IP3-213ENST00000478359 IGKV1D-37A0A075B6S9 117 aa9.96□□□□□ -0.82
TRAF3IP3-213ENST00000478359 C5orf52A6NGY3 159 aa9.96□□□□□ -0.82
TRAF3IP3-213ENST00000478359 REG1AP05451 166 aa9.96□□□□□ -0.82
TRAF3IP3-213ENST00000478359 HOXB4P17483 251 aaPredicted RBP9.96□□□□□ -0.82
TRAF3IP3-213ENST00000478359 GATA2P23769 480 aaPredicted RBP9.96□□□□□ -0.82
TRAF3IP3-213ENST00000478359 UBE2E1P51965 193 aa9.96□□□□□ -0.82
TRAF3IP3-213ENST00000478359 ZNF343Q6P1L6 599 aa9.96□□□□□ -0.82
TRAF3IP3-213ENST00000478359 C16orf82Q7Z2V1 217 aa9.96□□□□□ -0.82
TRAF3IP3-213ENST00000478359 OR4X1Q8NH49 305 aa9.96□□□□□ -0.82
TRAF3IP3-213ENST00000478359 TMEM190Q8WZ59 177 aa9.96□□□□□ -0.82
TRAF3IP3-213ENST00000478359 PERPQ96FX8 193 aa9.96□□□□□ -0.82
TRAF3IP3-213ENST00000478359 EAF1Q96JC9 268 aaPredicted RBP9.96□□□□□ -0.82
TRAF3IP3-213ENST00000478359 POLR3KQ9Y2Y1 108 aaPredicted RBP9.96□□□□□ -0.82
TRAF3IP3-213ENST00000478359 TPRP12270 2363 aaKnown RBP9.95□□□□□ -0.82
TRAF3IP3-213ENST00000478359 ATRXP46100 2492 aa9.95□□□□□ -0.82
TRAF3IP3-213ENST00000478359 NDUFS8O00217 210 aa9.95□□□□□ -0.82
TRAF3IP3-213ENST00000478359 TOX4O94842 621 aa9.95□□□□□ -0.82
TRAF3IP3-213ENST00000478359 CXCL1P09341 107 aa9.95□□□□□ -0.82
TRAF3IP3-213ENST00000478359 GALR1P47211 349 aa9.95□□□□□ -0.82
TRAF3IP3-213ENST00000478359 PLP1P60201 277 aa9.95□□□□□ -0.82
TRAF3IP3-213ENST00000478359 HES1Q14469 280 aa9.95□□□□□ -0.82
TRAF3IP3-213ENST00000478359 C5orf64Q2M2E5 130 aa9.95□□□□□ -0.82
TRAF3IP3-213ENST00000478359 LDLRAD2Q5SZI1 272 aa9.95□□□□□ -0.82
TRAF3IP3-213ENST00000478359 PYGO2Q9BRQ0 406 aa9.95□□□□□ -0.82
TRAF3IP3-213ENST00000478359 C1RLQ9NZP8 487 aa9.95□□□□□ -0.82
TRAF3IP3-213ENST00000478359 ZZEF1O43149 2961 aa9.95□□□□□ -0.82
TRAF3IP3-213ENST00000478359 TGIF2-C20orf24A0A0A6YYL0 155 aa9.94□□□□□ -0.82
TRAF3IP3-213ENST00000478359 MDFIC2A0A1B0GVS7 189 aa9.94□□□□□ -0.82
TRAF3IP3-213ENST00000478359 SCO2A0A1W2PP80 73 aa9.94□□□□□ -0.82
TRAF3IP3-213ENST00000478359 UBE2CO00762 179 aa9.94□□□□□ -0.82
TRAF3IP3-213ENST00000478359 NDUFS7O75251 213 aa9.94□□□□□ -0.82
TRAF3IP3-213ENST00000478359 PFN1P07737 140 aaKnown RBP9.94□□□□□ -0.82
TRAF3IP3-213ENST00000478359 ZFP36P26651 326 aaKnown RBP9.94□□□□□ -0.82
TRAF3IP3-213ENST00000478359 LCN2P80188 198 aa9.94□□□□□ -0.82
TRAF3IP3-213ENST00000478359 PRB3Q04118 309 aaPredicted RBP9.94□□□□□ -0.82
TRAF3IP3-213ENST00000478359 KLRD1Q13241 179 aa9.94□□□□□ -0.82
TRAF3IP3-213ENST00000478359 ZNF562Q6V9R5 426 aa9.94□□□□□ -0.82
TRAF3IP3-213ENST00000478359 LHFPL4Q7Z7J7 247 aa9.94□□□□□ -0.82
TRAF3IP3-213ENST00000478359 BPESC1Q9GZL8 116 aa9.94□□□□□ -0.82
TRAF3IP3-213ENST00000478359 COL6A6A6NMZ7 2263 aa9.94□□□□□ -0.82
TRAF3IP3-213ENST00000478359 ABCA4P78363 2273 aa9.94□□□□□ -0.82
TRAF3IP3-213ENST00000478359 AP4M1O00189 453 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 BRS3P32247 399 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 MFAP2P55001 183 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 LMO4P61968 165 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 UBE2L3P68036 154 aaKnown RBP9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 SSBP2P81877 361 aaPredicted RBP9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 ZNF90Q03938 601 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 KIAA0141Q14154 515 aaPredicted RBP9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 FXYD3Q14802 87 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 S100A7AQ86SG5 101 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 OR5AU1Q8NGC0 362 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 SLC25A2Q9BXI2 301 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 WNT10AQ9GZT5 417 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 ZNF355PQ9NSJ1 428 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 HIVEP3Q5T1R4 2406 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 NPIPB5A8MRT5 1133 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 PPP5D1E7EU14 171 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 FCN1O00602 326 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 S100A8P05109 93 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 FAM106CPP0CH98 169 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 SNRPEP62304 92 aaKnown RBP9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 LINC00305Q7Z4B0 112 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 Q8N6K4 173 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 IGFBPL1Q8WX77 278 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 ZNF503Q96F45 646 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 SFRP2Q96HF1 295 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 FAM167A-AS1Q96KT0 104 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 SPOCK3Q9BQ16 436 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 PAXXQ9BUH6 204 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 OR51M1Q9H341 326 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 SRD5A3Q9H8P0 318 aa9.93□□□□□ -0.82
TRAF3IP3-213ENST00000478359 TRAV30A0A087WSZ9 112 aa9.92□□□□□ -0.82
TRAF3IP3-213ENST00000478359 HELTA6NFD8 242 aa9.92□□□□□ -0.82
TRAF3IP3-213ENST00000478359 I3L2K1 104 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms