RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 IGLV2-23P01705 113 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 HLA-DRB1P01911 266 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 RLN2P04090 185 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 FGF2P09038 288 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 PVALBP20472 110 aaPredicted RBP7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 ZP3P21754 424 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 SYNJ2BPP57105 145 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 TPPP2P59282 170 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 IL15RAQ13261 267 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 KLF5Q13887 457 aaPredicted RBP7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 PLGLAQ15195 96 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 AARDQ4LEZ3 155 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 Q5BKY6 102 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 Q6ZRM9 215 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 NOXA1Q86UR1 476 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 ZNF575Q86XF7 245 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 PUSL1Q8N0Z8 303 aaKnown RBP7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 TEX45Q8NA69 505 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 GRPEL2Q8TAA5 225 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 TMEM167AQ8TBQ9 72 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 HYLS1Q96M11 299 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 CLCC1Q96S66 551 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 QTRT1Q9BXR0 403 aaKnown RBP7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 METTL1Q9UBP6 276 aaKnown RBP7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 HSPB7Q9UBY9 170 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 RCL1Q9Y2P8 373 aaKnown RBP7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 NSG2Q9Y328 171 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 TRAV3A0A0B4J244 114 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 ANKRD34BA5PLL1 514 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 CEBPZOSA8MTT3 80 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 L7N2F9 121 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 RRHO14718 337 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 ARPC5O15511 151 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 MED6O75586 246 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 ACTL6BO94805 426 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 IFNA17P01571 189 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 CSN3P07498 182 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 HOXA1P49639 335 aaPredicted RBP7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 POLR2GP62487 172 aaKnown RBP eCLIP7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 RPL8P62917 257 aaKnown RBP7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 VAMP2P63027 116 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 ID3Q02535 119 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 PSG5Q15238 335 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 C19orf54Q5BKX5 351 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 OR5B3Q8NH48 314 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 RNF183Q96D59 192 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 RITA1Q96K30 269 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 COMMD5Q9GZQ3 224 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 MAGT1Q9H0U3 335 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 ZNF430Q9H8G1 570 aaPredicted RBP7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 TMEM14BQ9NUH8 114 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 OR5AC2Q9NZP5 309 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 ZNF257Q9Y2Q1 563 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 OR51B2Q9Y5P1 312 aa7.27□□□□□ -1.25
SMARCB1-206ENST00000477836 E5RGE8 158 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 SYNGR2O43760 224 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 NDUFA3O95167 84 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 IAPPP10997 89 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 SLC25A4P12235 298 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 NUP62P37198 522 aaPredicted RBP7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 CAV2P51636 162 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 NKX2-5P52952 324 aaPredicted RBP7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 SPCS3P61009 180 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 NDPQ00604 133 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 PRSS8Q16651 343 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 WFDC3Q8IUB2 231 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 MMD2Q8IY49 270 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 NPBQ8NG41 125 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 OR11H4Q8NGC9 324 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 OR2K2Q8NGT1 345 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 OR52E5Q8NH55 327 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 DTD1Q8TEA8 209 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 CIB3Q96Q77 187 aaPredicted RBP7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 RAB40CQ96S21 281 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 GGTLC1Q9BX51 225 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 FBXL15Q9H469 300 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 RBKSQ9H477 322 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 ENY2Q9NPA8 101 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 FKBP11Q9NYL4 201 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 TNFSF18Q9UNG2 199 aa7.26□□□□□ -1.25
SMARCB1-206ENST00000477836 ZNF785A8K8V0 405 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 HMSDA8MTL9 139 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 H0YIZ8 118 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 CRYGBP07316 175 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 IL6RP08887 468 aaPredicted RBP7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 ATF4P18848 351 aaPredicted RBP7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 BMI1P35226 326 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 MAS1LP35410 378 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 P2RY1P47900 373 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 PRCDQ00LT1 54 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 TNXAQ16473 311 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 C5orf64Q2M2E5 130 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 CD300EQ496F6 205 aaPredicted RBP7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 SPINK9Q5DT21 86 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 ZNF546Q86UE3 836 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 PPP1R27Q86WC6 154 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 C9orf62Q8N4C0 152 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 TMEM217Q8N7C4 229 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 INO80EQ8NBZ0 244 aaPredicted RBP7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 ABHD5Q8WTS1 349 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms