RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 HEYLQ9NQ87 328 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-209ENST00000477554 FBXL7Q9UJT9 491 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 LSM4Q9Y4Z0 139 aaKnown RBP13.47□□□□□ -0.25
PTPN7-209ENST00000477554 MFSD2BA6NFX1 497 aa13.46□□□□□ -0.26
PTPN7-209ENST00000477554 MFAP2P55001 183 aa13.46□□□□□ -0.26
PTPN7-209ENST00000477554 TAS2R30P59541 319 aa13.46□□□□□ -0.26
PTPN7-209ENST00000477554 RPP30P78346 268 aaKnown RBP13.46□□□□□ -0.26
PTPN7-209ENST00000477554 ATP5G2Q06055 141 aa13.46□□□□□ -0.26
PTPN7-209ENST00000477554 WT1-ASQ06250 92 aa13.46□□□□□ -0.26
PTPN7-209ENST00000477554 PRSS54Q6PEW0 395 aa13.46□□□□□ -0.26
PTPN7-209ENST00000477554 ADAMTSL5Q6ZMM2 481 aa13.46□□□□□ -0.26
PTPN7-209ENST00000477554 SORL1Q92673 2214 aa13.45□□□□□ -0.26
PTPN7-209ENST00000477554 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.45□□□□□ -0.26
PTPN7-209ENST00000477554 E5RGE8 158 aa13.45□□□□□ -0.26
PTPN7-209ENST00000477554 IAPPP10997 89 aa13.45□□□□□ -0.26
PTPN7-209ENST00000477554 NECAP1Q8NC96 275 aa13.45□□□□□ -0.26
PTPN7-209ENST00000477554 SMIM8Q96KF7 97 aa13.45□□□□□ -0.26
PTPN7-209ENST00000477554 ZC4H2Q9NQZ6 224 aa13.45□□□□□ -0.26
PTPN7-209ENST00000477554 ZNF256Q9Y2P7 627 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-209ENST00000477554 U3KQ87 197 aa13.45□□□□□ -0.26
PTPN7-209ENST00000477554 IGLV11-55A0A075B6I3 123 aa13.44□□□□□ -0.26
PTPN7-209ENST00000477554 TRAV14DV4A0A0A6YYC5 116 aa13.44□□□□□ -0.26
PTPN7-209ENST00000477554 FAM223BA6NKX1 122 aa13.44□□□□□ -0.26
PTPN7-209ENST00000477554 OR13C7P0DN81 318 aa13.44□□□□□ -0.26
PTPN7-209ENST00000477554 SLC25A4P12235 298 aa13.44□□□□□ -0.26
PTPN7-209ENST00000477554 LYL1P12980 280 aa13.44□□□□□ -0.26
PTPN7-209ENST00000477554 SNCAP37840 140 aa13.44□□□□□ -0.26
PTPN7-209ENST00000477554 ATP5IP56385 69 aaPredicted RBP13.44□□□□□ -0.26
PTPN7-209ENST00000477554 FAM223AQ8IWN6 122 aa13.44□□□□□ -0.26
PTPN7-209ENST00000477554 RNF126Q9BV68 326 aa13.44□□□□□ -0.26
PTPN7-209ENST00000477554 PSENENQ9NZ42 101 aa13.44□□□□□ -0.26
PTPN7-209ENST00000477554 IGHV3-21A0A0B4J1V1 117 aa13.43□□□□□ -0.26
PTPN7-209ENST00000477554 H0YIZ8 118 aa13.43□□□□□ -0.26
PTPN7-209ENST00000477554 TSC22D2O75157 780 aa13.43□□□□□ -0.26
PTPN7-209ENST00000477554 CSN3P07498 182 aa13.43□□□□□ -0.26
PTPN7-209ENST00000477554 ZP3P21754 424 aa13.43□□□□□ -0.26
PTPN7-209ENST00000477554 HTR2BP41595 481 aa13.43□□□□□ -0.26
PTPN7-209ENST00000477554 SUB1P53999 127 aaKnown RBP eCLIP13.43□□□□□ -0.265e-7■■■■■ 33
PTPN7-209ENST00000477554 Q5BKY6 102 aa13.43□□□□□ -0.26
PTPN7-209ENST00000477554 NOXA1Q86UR1 476 aa13.43□□□□□ -0.26
PTPN7-209ENST00000477554 OR2C3Q8N628 320 aa13.43□□□□□ -0.26
PTPN7-209ENST00000477554 OR9G4Q8NGQ1 327 aa13.43□□□□□ -0.26
PTPN7-209ENST00000477554 C11orf1Q9H5F2 150 aa13.43□□□□□ -0.26
PTPN7-209ENST00000477554 OR5AC2Q9NZP5 309 aa13.43□□□□□ -0.26
PTPN7-209ENST00000477554 MBD2Q9UBB5 411 aa13.43□□□□□ -0.26
PTPN7-209ENST00000477554 IZUMO1RA6ND01 250 aa13.42□□□□□ -0.26
PTPN7-209ENST00000477554 SMLR1H3BR10 107 aa13.42□□□□□ -0.26
PTPN7-209ENST00000477554 OR2C1O95371 312 aa13.42□□□□□ -0.26
PTPN7-209ENST00000477554 IFNA10P01566 189 aa13.42□□□□□ -0.26
PTPN7-209ENST00000477554 C1QBP02746 253 aa13.42□□□□□ -0.26
PTPN7-209ENST00000477554 P2RY1P47900 373 aa13.42□□□□□ -0.26
PTPN7-209ENST00000477554 PAX9P55771 341 aa13.42□□□□□ -0.26
PTPN7-209ENST00000477554 RPEL1Q2QD12 228 aa13.42□□□□□ -0.26
PTPN7-209ENST00000477554 KLK9Q2XQG4 91 aa13.42□□□□□ -0.26
PTPN7-209ENST00000477554 CLEC19AQ6UXS0 136 aa13.42□□□□□ -0.26
PTPN7-209ENST00000477554 KLK9Q9UKQ9 250 aa13.42□□□□□ -0.26
PTPN7-209ENST00000477554 STRAPQ9Y3F4 350 aaKnown RBP13.42□□□□□ -0.26
PTPN7-209ENST00000477554 G3V3Q6 166 aa13.41□□□□□ -0.26
PTPN7-209ENST00000477554 IGLV1-51P01701 117 aa13.41□□□□□ -0.26
PTPN7-209ENST00000477554 NUP62P37198 522 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-209ENST00000477554 INSL3P51460 131 aa13.41□□□□□ -0.26
PTPN7-209ENST00000477554 SPANXN5Q5MJ07 72 aa13.41□□□□□ -0.26
PTPN7-209ENST00000477554 ZNF546Q86UE3 836 aa13.41□□□□□ -0.26
PTPN7-209ENST00000477554 ZNF114Q8NC26 417 aa13.41□□□□□ -0.26
PTPN7-209ENST00000477554 SLC24A4Q8NFF2 622 aa13.41□□□□□ -0.26
PTPN7-209ENST00000477554 OR1L6Q8NGR2 347 aa13.41□□□□□ -0.26
PTPN7-209ENST00000477554 ASCL2Q99929 193 aa13.41□□□□□ -0.26
PTPN7-209ENST00000477554 LYRM2Q9NU23 88 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-209ENST00000477554 FXYD6-FXYD2A0A087WZ82 144 aa13.4□□□□□ -0.26
PTPN7-209ENST00000477554 CYB5BO43169 146 aa13.4□□□□□ -0.26
PTPN7-209ENST00000477554 TMEM50AO95807 157 aa13.4□□□□□ -0.26
PTPN7-209ENST00000477554 DEFA4P12838 97 aa13.4□□□□□ -0.26
PTPN7-209ENST00000477554 GP9P14770 177 aa13.4□□□□□ -0.26
PTPN7-209ENST00000477554 NPY1RP25929 384 aa13.4□□□□□ -0.26
PTPN7-209ENST00000477554 CAV2P51636 162 aa13.4□□□□□ -0.26
PTPN7-209ENST00000477554 RAB11AP62491 216 aa13.4□□□□□ -0.26
PTPN7-209ENST00000477554 CD300CQ08708 224 aa13.4□□□□□ -0.26
PTPN7-209ENST00000477554 BSXQ3C1V8 233 aa13.4□□□□□ -0.26
PTPN7-209ENST00000477554 ZFP69Q49AA0 526 aa13.4□□□□□ -0.26
PTPN7-209ENST00000477554 HYLS1Q96M11 299 aa13.4□□□□□ -0.26
PTPN7-209ENST00000477554 OR4C12Q96R67 309 aa13.4□□□□□ -0.26
PTPN7-209ENST00000477554 SLC25A31Q9H0C2 315 aa13.4□□□□□ -0.26
PTPN7-209ENST00000477554 IGHV3-35A0A0C4DH35 117 aa13.39□□□□□ -0.27
PTPN7-209ENST00000477554 HMSDA8MTL9 139 aa13.39□□□□□ -0.27
PTPN7-209ENST00000477554 H3BP45 60 aa13.39□□□□□ -0.27
PTPN7-209ENST00000477554 SCAF4O95104 1147 aaKnown RBP13.39□□□□□ -0.27
PTPN7-209ENST00000477554 C2orf83Q53S99 150 aa13.39□□□□□ -0.27
PTPN7-209ENST00000477554 INO80EQ8NBZ0 244 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-209ENST00000477554 OR1P1Q8NH06 330 aa13.39□□□□□ -0.27
PTPN7-209ENST00000477554 CACNG8Q8WXS5 425 aa13.39□□□□□ -0.27
PTPN7-209ENST00000477554 B9D2Q9BPU9 175 aa13.39□□□□□ -0.27
PTPN7-209ENST00000477554 F11RQ9Y624 299 aaKnown RBP13.39□□□□□ -0.27
PTPN7-209ENST00000477554 RNASE2P10153 161 aaKnown RBP13.39□□□□□ -0.27
PTPN7-209ENST00000477554 PPP1R14BQ96C90 147 aa13.39□□□□□ -0.27
PTPN7-209ENST00000477554 ZNF414Q96IQ9 312 aa13.39□□□□□ -0.27
PTPN7-209ENST00000477554 FAM24AA6NFZ4 105 aa13.38□□□□□ -0.27
PTPN7-209ENST00000477554 C15orf62A8K5M9 175 aa13.38□□□□□ -0.27
PTPN7-209ENST00000477554 F8W735 103 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-209ENST00000477554 RPL12P30050 165 aaKnown RBP13.38□□□□□ -0.27
PTPN7-209ENST00000477554 ARL3P36405 182 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms