RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 OR13C7P0DN81 318 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 ZFP36P26651 326 aaKnown RBP5.33□□□□□ -1.56
LDB3-206ENST00000477489 ATP5J2P56134 94 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 BPIFB3P59826 476 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 MEF2BQ02080 365 aaPredicted RBP5.33□□□□□ -1.56
LDB3-206ENST00000477489 WT1-ASQ06250 92 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 PAX8Q06710 450 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 ICAM4Q14773 271 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 MRGPRG-AS1Q2M3A8 158 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 KLK9Q2XQG4 91 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 LCN15Q6UWW0 184 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 ZNF562Q6V9R5 426 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 PQLC2Q6ZP29 291 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 S100A7AQ86SG5 101 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 LRRC75A-AS1Q8N1F1 130 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 STPG3Q8N7X2 389 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 TMEM116Q8NCL8 245 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 GATAD1Q8WUU5 269 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 SRSF12Q8WXF0 261 aaKnown RBP5.33□□□□□ -1.56
LDB3-206ENST00000477489 RAB24Q969Q5 203 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 EAF1Q96JC9 268 aaPredicted RBP5.33□□□□□ -1.56
LDB3-206ENST00000477489 SSX3Q99909 188 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 TCEAL7Q9BRU2 100 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 NIPSNAP3BQ9BS92 247 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 VSIRQ9H7M9 311 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 SIRT7Q9NRC8 400 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 SMCO4Q9NRQ5 59 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 TMEM167BQ9NRX6 74 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 KLK9Q9UKQ9 250 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 RNF24Q9Y225 148 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 F11RQ9Y624 299 aaKnown RBP5.33□□□□□ -1.56
LDB3-206ENST00000477489 ADGRG4Q8IZF6 3080 aa5.33□□□□□ -1.56
LDB3-206ENST00000477489 CENPEQ02224 2701 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 NAV3Q8IVL0 2385 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 TRAV20A0A0B4J274 112 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 TCRBV4S1A1TA0A5B7 111 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 CXorf65A6NEN9 183 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 CGB1A6NKQ9 187 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 NPIPB5A8MRT5 1133 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 TEX22C9J3V5 150 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 C9JQL5 133 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 NDUFS7O75251 213 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 YIF1AO95070 293 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 IGKV1D-33P01593 117 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 IGKV1-33P01594 117 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 OR5G3P0C626 314 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 PLP1P60201 277 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 CCL20P78556 96 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 GAMTQ14353 236 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 PLGLAQ15195 96 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 MMDQ15546 238 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 TNXAQ16473 311 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 GUCA2BQ16661 112 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 C5orf64Q2M2E5 130 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 FAM122CQ6P4D5 195 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 CYP2G1PQ6ZSU1 146 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 STXBP6Q8NFX7 210 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 TVP23CQ96ET8 276 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 ZNF48Q96MX3 618 aaPredicted RBP5.32□□□□□ -1.56
LDB3-206ENST00000477489 TBX15Q96SF7 602 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 TRGV9Q99603 122 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 TMEM231Q9H6L2 316 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 BEX4Q9NWD9 120 aaPredicted RBP5.32□□□□□ -1.56
LDB3-206ENST00000477489 TMEM242Q9NWH2 141 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 TECRQ9NZ01 308 aaKnown RBP5.32□□□□□ -1.56
LDB3-206ENST00000477489 THYN1Q9P016 225 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 GNG13Q9P2W3 67 aa5.32□□□□□ -1.56
LDB3-206ENST00000477489 CELSR1Q9NYQ6 3014 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 TRAV30A0A087WSZ9 112 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 IGHV3-72A0A0B4J1Y9 119 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 ZFP92A6NM28 416 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 B4DSR2 109 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 J3QLI3 93 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 DNASE2O00115 360 aaPredicted RBP5.31□□□□□ -1.56
LDB3-206ENST00000477489 NPFFO15130 113 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 HMGB3O15347 200 aaKnown RBP5.31□□□□□ -1.56
LDB3-206ENST00000477489 HLA-DRB1P01911 266 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 LINC00869P0C866 280 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 HIST1H1BP16401 226 aaKnown RBP5.31□□□□□ -1.56
LDB3-206ENST00000477489 CTRB1P17538 263 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 S100A7P31151 101 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 LCN2P80188 198 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 BTN1A1Q13410 526 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 HAGHQ16775 308 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 MIC13Q5XKP0 118 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 CTRB2Q6GPI1 263 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 SPNS3Q6ZMD2 512 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 C15orf54Q8N8G6 183 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 OR10W1Q8NGF6 305 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 OR4X1Q8NH49 305 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 RXFP4Q8TDU9 374 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 ATP6V0BQ99437 205 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 RARRES2Q99969 163 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 SLC25A22Q9H936 323 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 FUT9Q9Y231 359 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 RFNGQ9Y644 331 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 CSMD2Q7Z408 3487 aa5.31□□□□□ -1.56
LDB3-206ENST00000477489 E7EUB6 86 aa5.3□□□□□ -1.56
LDB3-206ENST00000477489 M0QZK8 103 aa5.3□□□□□ -1.56
LDB3-206ENST00000477489 CNIH1O95406 144 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms