RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 ALG5Q9Y673 324 aa13.15□□□□□ -0.3
SMARCD3-210ENST00000477169 U3KQ87 197 aa13.15□□□□□ -0.3
SMARCD3-210ENST00000477169 BMPR1BO00238 502 aa13.14□□□□□ -0.31
SMARCD3-210ENST00000477169 WRBO00258 174 aa13.14□□□□□ -0.31
SMARCD3-210ENST00000477169 IFNA10P01566 189 aa13.14□□□□□ -0.31
SMARCD3-210ENST00000477169 ZP3P21754 424 aa13.14□□□□□ -0.31
SMARCD3-210ENST00000477169 PINX1Q96BK5 328 aaKnown RBP13.14□□□□□ -0.31
SMARCD3-210ENST00000477169 C21orf62Q9NYP8 219 aa13.14□□□□□ -0.31
SMARCD3-210ENST00000477169 TENM3Q9P273 2699 aa13.14□□□□□ -0.31
SMARCD3-210ENST00000477169 PPP5D1E7EU14 171 aa13.13□□□□□ -0.31
SMARCD3-210ENST00000477169 F8W735 103 aaPredicted RBP13.13□□□□□ -0.31
SMARCD3-210ENST00000477169 CORTO00230 105 aa13.13□□□□□ -0.31
SMARCD3-210ENST00000477169 GOSR2O14653 212 aa13.13□□□□□ -0.31
SMARCD3-210ENST00000477169 SSNA1O43805 119 aa13.13□□□□□ -0.31
SMARCD3-210ENST00000477169 SIX6O95475 246 aa13.13□□□□□ -0.31
SMARCD3-210ENST00000477169 SCGB1D2O95969 90 aa13.13□□□□□ -0.31
SMARCD3-210ENST00000477169 IGHV3-48P01763 117 aa13.13□□□□□ -0.31
SMARCD3-210ENST00000477169 MBPP02686 304 aaPredicted RBP13.13□□□□□ -0.31
SMARCD3-210ENST00000477169 CLEC3BP05452 202 aa13.13□□□□□ -0.31
SMARCD3-210ENST00000477169 GP9P14770 177 aa13.13□□□□□ -0.31
SMARCD3-210ENST00000477169 NOXA1Q86UR1 476 aa13.13□□□□□ -0.31
SMARCD3-210ENST00000477169 CIB3Q96Q77 187 aaPredicted RBP13.13□□□□□ -0.31
SMARCD3-210ENST00000477169 ASCL2Q99929 193 aa13.13□□□□□ -0.31
SMARCD3-210ENST00000477169 FNDC4Q9H6D8 234 aaPredicted RBP13.13□□□□□ -0.31
SMARCD3-210ENST00000477169 C15orf62A8K5M9 175 aa13.12□□□□□ -0.31
SMARCD3-210ENST00000477169 GPR183P32249 361 aa13.12□□□□□ -0.31
SMARCD3-210ENST00000477169 ARL3P36405 182 aa13.12□□□□□ -0.31
SMARCD3-210ENST00000477169 ATP5IP56385 69 aaPredicted RBP13.12□□□□□ -0.31
SMARCD3-210ENST00000477169 IL15RAQ13261 267 aa13.12□□□□□ -0.31
SMARCD3-210ENST00000477169 MLANAQ16655 118 aa13.12□□□□□ -0.31
SMARCD3-210ENST00000477169 RNASEH2CQ8TDP1 164 aaKnown RBP13.12□□□□□ -0.31
SMARCD3-210ENST00000477169 ATP6V0BQ99437 205 aa13.12□□□□□ -0.31
SMARCD3-210ENST00000477169 RCL1Q9Y2P8 373 aaKnown RBP13.12□□□□□ -0.31
SMARCD3-210ENST00000477169 OR2T8A6NH00 312 aa13.11□□□□□ -0.31
SMARCD3-210ENST00000477169 SSSCA1O60232 199 aa13.11□□□□□ -0.31
SMARCD3-210ENST00000477169 GGCTO75223 188 aaKnown RBP13.11□□□□□ -0.31
SMARCD3-210ENST00000477169 TMEM50AO95807 157 aa13.11□□□□□ -0.31
SMARCD3-210ENST00000477169 FCGR2BP31994 310 aaPredicted RBP13.11□□□□□ -0.31
SMARCD3-210ENST00000477169 OPRK1P41145 380 aa13.11□□□□□ -0.31
SMARCD3-210ENST00000477169 MFAP4P55083 255 aa13.11□□□□□ -0.31
SMARCD3-210ENST00000477169 PAX9P55771 341 aa13.11□□□□□ -0.31
SMARCD3-210ENST00000477169 KLF5Q13887 457 aaPredicted RBP13.11□□□□□ -0.31
SMARCD3-210ENST00000477169 ZC4H2Q9NQZ6 224 aa13.11□□□□□ -0.31
SMARCD3-210ENST00000477169 K7EPK0 472 aa13.1□□□□□ -0.31
SMARCD3-210ENST00000477169 OR2C1O95371 312 aa13.1□□□□□ -0.31
SMARCD3-210ENST00000477169 IGLV1-51P01701 117 aa13.1□□□□□ -0.31
SMARCD3-210ENST00000477169 RPEL1Q2QD12 228 aa13.1□□□□□ -0.31
SMARCD3-210ENST00000477169 Q56UQ5 140 aa13.1□□□□□ -0.31
SMARCD3-210ENST00000477169 UBAC2Q8NBM4 344 aa13.1□□□□□ -0.31
SMARCD3-210ENST00000477169 BSCL2Q96G97 398 aaPredicted RBP13.1□□□□□ -0.31
SMARCD3-210ENST00000477169 SMIM8Q96KF7 97 aa13.1□□□□□ -0.31
SMARCD3-210ENST00000477169 TXN2Q99757 166 aa13.1□□□□□ -0.31
SMARCD3-210ENST00000477169 MRPL36Q9P0J6 103 aaKnown RBP13.1□□□□□ -0.31
SMARCD3-210ENST00000477169 NBEAL2Q6ZNJ1 2754 aa13.1□□□□□ -0.31
SMARCD3-210ENST00000477169 RPS10-NUDT3A0A1W2PQS6 291 aa13.09□□□□□ -0.31
SMARCD3-210ENST00000477169 H3BP45 60 aa13.09□□□□□ -0.31
SMARCD3-210ENST00000477169 TGOLN2O43493 480 aa13.09□□□□□ -0.31
SMARCD3-210ENST00000477169 IFNA4P05014 189 aa13.09□□□□□ -0.31
SMARCD3-210ENST00000477169 H2BFSP57053 126 aa13.09□□□□□ -0.31
SMARCD3-210ENST00000477169 RPP30P78346 268 aaKnown RBP13.09□□□□□ -0.31
SMARCD3-210ENST00000477169 SPANXN5Q5MJ07 72 aa13.09□□□□□ -0.31
SMARCD3-210ENST00000477169 SBSPONQ8IVN8 264 aa13.09□□□□□ -0.31
SMARCD3-210ENST00000477169 RAB40CQ96S21 281 aa13.09□□□□□ -0.31
SMARCD3-210ENST00000477169 CHRDL1Q9BU40 450 aa13.09□□□□□ -0.31
SMARCD3-210ENST00000477169 PSENENQ9NZ42 101 aa13.09□□□□□ -0.31
SMARCD3-210ENST00000477169 MGAT4CQ9UBM8 478 aa13.09□□□□□ -0.31
SMARCD3-210ENST00000477169 STRAPQ9Y3F4 350 aaKnown RBP13.09□□□□□ -0.31
SMARCD3-210ENST00000477169 LSM5Q9Y4Y9 91 aaKnown RBP13.09□□□□□ -0.31
SMARCD3-210ENST00000477169 CTSGP08311 255 aa13.08□□□□□ -0.32
SMARCD3-210ENST00000477169 ADMP35318 185 aa13.08□□□□□ -0.32
SMARCD3-210ENST00000477169 SYNJ2BPP57105 145 aa13.08□□□□□ -0.32
SMARCD3-210ENST00000477169 TAS2R30P59541 319 aa13.08□□□□□ -0.32
SMARCD3-210ENST00000477169 RAB11AP62491 216 aa13.08□□□□□ -0.32
SMARCD3-210ENST00000477169 RAB32Q13637 225 aa13.08□□□□□ -0.32
SMARCD3-210ENST00000477169 SPSB3Q6PJ21 355 aa13.08□□□□□ -0.32
SMARCD3-210ENST00000477169 OR9G4Q8NGQ1 327 aa13.08□□□□□ -0.32
SMARCD3-210ENST00000477169 WDR89Q96FK6 387 aaPredicted RBP13.08□□□□□ -0.32
SMARCD3-210ENST00000477169 NMES1Q9C002 83 aa13.08□□□□□ -0.32
SMARCD3-210ENST00000477169 C11orf1Q9H5F2 150 aa13.08□□□□□ -0.32
SMARCD3-210ENST00000477169 GAR1Q9NY12 217 aaKnown RBP13.08□□□□□ -0.32
SMARCD3-210ENST00000477169 PAIP2BQ9ULR5 123 aaKnown RBP13.08□□□□□ -0.32
SMARCD3-210ENST00000477169 HUWE1Q7Z6Z7 4374 aaKnown RBP13.08□□□□□ -0.32
SMARCD3-210ENST00000477169 FRMD6-AS1P0C7T7 363 aa13.07□□□□□ -0.32
SMARCD3-210ENST00000477169 NPBWR1P48145 328 aa13.07□□□□□ -0.32
SMARCD3-210ENST00000477169 PRSS54Q6PEW0 395 aa13.07□□□□□ -0.32
SMARCD3-210ENST00000477169 IL34Q6ZMJ4 242 aa13.07□□□□□ -0.32
SMARCD3-210ENST00000477169 GPHB5Q86YW7 130 aa13.07□□□□□ -0.32
SMARCD3-210ENST00000477169 OR4X1Q8NH49 305 aa13.07□□□□□ -0.32
SMARCD3-210ENST00000477169 RYR3Q15413 4870 aa13.06□□□□□ -0.32
SMARCD3-210ENST00000477169 IGHV3-35A0A0C4DH35 117 aa13.06□□□□□ -0.32
SMARCD3-210ENST00000477169 PRSS46E5RG02 174 aa13.06□□□□□ -0.32
SMARCD3-210ENST00000477169 GNG7O60262 68 aa13.06□□□□□ -0.32
SMARCD3-210ENST00000477169 TSC22D2O75157 780 aa13.06□□□□□ -0.32
SMARCD3-210ENST00000477169 SLC25A4P12235 298 aa13.06□□□□□ -0.32
SMARCD3-210ENST00000477169 GPX4P36969 197 aaPredicted RBP13.06□□□□□ -0.32
SMARCD3-210ENST00000477169 S100A10P60903 97 aa13.06□□□□□ -0.32
SMARCD3-210ENST00000477169 CYCSP99999 105 aaKnown RBP13.06□□□□□ -0.32
SMARCD3-210ENST00000477169 ETFRF1Q6IPR1 90 aa13.06□□□□□ -0.32
SMARCD3-210ENST00000477169 SLC16A13Q7RTY0 426 aa13.06□□□□□ -0.32
SMARCD3-210ENST00000477169 HAPLN4Q86UW8 402 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms