RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 SAP25Q8TEE9 199 aa3.41□□□□□ -1.86
CD55-208ENST00000476590 LRRC29Q8WV35 223 aa3.41□□□□□ -1.86
CD55-208ENST00000476590 BAALCQ8WXS3 180 aa3.41□□□□□ -1.86
CD55-208ENST00000476590 CHCHD1Q96BP2 118 aaKnown RBP3.41□□□□□ -1.86
CD55-208ENST00000476590 LINC00477Q96M19 166 aa3.41□□□□□ -1.86
CD55-208ENST00000476590 C18orf15Q96N68 181 aa3.41□□□□□ -1.86
CD55-208ENST00000476590 B9D1Q9UPM9 204 aa3.41□□□□□ -1.86
CD55-208ENST00000476590 TIMM9Q9Y5J7 89 aa3.41□□□□□ -1.86
CD55-208ENST00000476590 TMEM14AQ9Y6G1 99 aa3.41□□□□□ -1.86
CD55-208ENST00000476590 LY96Q9Y6Y9 160 aa3.41□□□□□ -1.86
CD55-208ENST00000476590 COL4A4P53420 1690 aaPredicted RBP3.4□□□□□ -1.86
CD55-208ENST00000476590 CPAMD8Q8IZJ3 1885 aa3.4□□□□□ -1.86
CD55-208ENST00000476590 DOCK3Q8IZD9 2030 aa3.4□□□□□ -1.86
CD55-208ENST00000476590 POLR2AP24928 1970 aaKnown RBP3.4□□□□□ -1.86
CD55-208ENST00000476590 MED12LQ86YW9 2145 aa3.4□□□□□ -1.86
CD55-208ENST00000476590 DOCK9Q9BZ29 2069 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 TEX50A0A1B0GTY4 177 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 H3BSH0 61 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 ATP5LO75964 103 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 NDUFB2O95178 105 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 KLK1P06870 262 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 FRMD6-AS1P0C7T7 363 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 CDAP32320 146 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 CSN1S1P47710 185 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 NMUP48645 174 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 HERV-K104P61576 105 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 PPP1CAP62136 330 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 HERVK_113P63121 156 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 EIF3IQ13347 325 aaKnown RBP3.4□□□□□ -1.87
CD55-208ENST00000476590 PMVKQ15126 192 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 LY6KQ17RY6 165 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 SP6Q3SY56 376 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 C6orf226Q5I0X4 101 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 C9orf153Q5TBE3 101 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 LINC01590Q5TEZ4 76 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 CFAP126Q5VTH2 177 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 TEN1Q86WV5 123 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 TMEM86AQ8N2M4 240 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 ZNF808Q8N4W9 903 aaPredicted RBP3.4□□□□□ -1.87
CD55-208ENST00000476590 OTOSQ8NHW6 89 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 SLC37A2Q8TED4 501 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 IL1F10Q8WWZ1 152 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 NUS1Q96E22 293 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 LINC00479Q96M42 142 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 SPANXDQ9BXN6 97 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 SPRY4Q9C004 299 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 FBXL15Q9H469 300 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 FAM60AQ9NP50 221 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 PAPPA2Q9BXP8 1791 aa3.4□□□□□ -1.87
CD55-208ENST00000476590 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 TRAV4A0A0B4J268 109 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 TMEM14DPA8MWL7 114 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 USP17L23D6RBM5 183 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 DUSP14O95147 198 aaKnown RBP3.39□□□□□ -1.87
CD55-208ENST00000476590 NDUFB4O95168 129 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 NAPSAO96009 420 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 IGLV3-25P01717 112 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 SCTP09683 121 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 MGST1P10620 155 aaKnown RBP3.39□□□□□ -1.87
CD55-208ENST00000476590 HLA-DOBP13765 273 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 MPV17P39210 176 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 CCL11P51671 97 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 ARL16Q0P5N6 197 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 GUSBP1Q15486 140 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 LYSMD4Q5XG99 296 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 HRCT1Q6UXD1 115 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 SLC22A24Q8N4F4 322 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 C10orf126Q8N4M7 172 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 RPP25LQ8N5L8 163 aaKnown RBP3.39□□□□□ -1.87
CD55-208ENST00000476590 OR9G1Q8NH87 305 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 GATAD1Q8WUU5 269 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 CARD19Q96LW7 228 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 GLIPR2Q9H4G4 154 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 ZNF331Q9NQX6 463 aaPredicted RBP3.39□□□□□ -1.87
CD55-208ENST00000476590 HIGD1BQ9P298 99 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 FZR1Q9UM11 496 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 PROCRQ9UNN8 238 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 OR1A2Q9Y585 309 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 ADAMTSL1Q8N6G6 1762 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 DOCK11Q5JSL3 2073 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 LYPD3O95274 346 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 WISP1O95388 367 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 CLDN7O95471 211 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 RPL35AP18077 110 aaKnown RBP3.39□□□□□ -1.87
CD55-208ENST00000476590 LMO2P25791 158 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 CNTFRP26992 372 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 HSPE1P61604 102 aaKnown RBP3.39□□□□□ -1.87
CD55-208ENST00000476590 EFEMP1Q12805 493 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 C1orf61Q13536 156 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 SSX8Q7RTT4 187 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 HSD11B1LQ7Z5J1 315 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 TRPT1Q86TN4 253 aaKnown RBP3.39□□□□□ -1.87
CD55-208ENST00000476590 SPACA3Q8IXA5 215 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 C3orf22Q8N5N4 141 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 ZNF525Q8N782 197 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 C3orf56Q8N813 242 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 GATD1Q8NB37 220 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 OVCA2Q8WZ82 227 aa3.39□□□□□ -1.87
CD55-208ENST00000476590 TRPM6Q9BX84 2022 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms