RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 NACAE9PAV3 2078 aa11.67□□□□□ -0.54
APOBEC3F-203ENST00000476513 TMEM189A5PLL7 270 aa11.67□□□□□ -0.54
APOBEC3F-203ENST00000476513 MEIS3P1A6NDR6 274 aa11.67□□□□□ -0.54
APOBEC3F-203ENST00000476513 HELTA6NFD8 242 aa11.67□□□□□ -0.54
APOBEC3F-203ENST00000476513 ZNF705FA8MVS1 300 aaPredicted RBP11.67□□□□□ -0.54
APOBEC3F-203ENST00000476513 ZNF705DP0CH99 300 aaPredicted RBP11.67□□□□□ -0.54
APOBEC3F-203ENST00000476513 ZNF705BP0CI00 300 aaPredicted RBP11.67□□□□□ -0.54
APOBEC3F-203ENST00000476513 HSPE1P61604 102 aaKnown RBP11.67□□□□□ -0.54
APOBEC3F-203ENST00000476513 KCTD21Q4G0X4 260 aa11.67□□□□□ -0.54
APOBEC3F-203ENST00000476513 SPINK9Q5DT21 86 aa11.67□□□□□ -0.54
APOBEC3F-203ENST00000476513 CMTM1Q8IZ96 169 aa11.67□□□□□ -0.54
APOBEC3F-203ENST00000476513 OR5H6Q8NGV6 325 aa11.67□□□□□ -0.54
APOBEC3F-203ENST00000476513 SEC22AQ96IW7 307 aa11.67□□□□□ -0.54
APOBEC3F-203ENST00000476513 DKK2Q9UBU2 259 aa11.67□□□□□ -0.54
APOBEC3F-203ENST00000476513 H3BMM0 161 aa11.66□□□□□ -0.54
APOBEC3F-203ENST00000476513 GPR31O00270 319 aa11.66□□□□□ -0.54
APOBEC3F-203ENST00000476513 HTN3P15516 51 aa11.66□□□□□ -0.54
APOBEC3F-203ENST00000476513 CBX5P45973 191 aa11.66□□□□□ -0.54
APOBEC3F-203ENST00000476513 RFX2P48378 723 aa11.66□□□□□ -0.54
APOBEC3F-203ENST00000476513 H2BFWTQ7Z2G1 175 aa11.66□□□□□ -0.54
APOBEC3F-203ENST00000476513 NARS2Q96I59 477 aaKnown RBP11.66□□□□□ -0.54
APOBEC3F-203ENST00000476513 NIPSNAP3BQ9BS92 247 aa11.66□□□□□ -0.54
APOBEC3F-203ENST00000476513 FXYD6Q9H0Q3 95 aa11.66□□□□□ -0.54
APOBEC3F-203ENST00000476513 TXNL4BQ9NX01 149 aaKnown RBP11.66□□□□□ -0.54
APOBEC3F-203ENST00000476513 MRPL36Q9P0J6 103 aaKnown RBP11.66□□□□□ -0.54
APOBEC3F-203ENST00000476513 A0A0A6YYH2 397 aa11.65□□□□□ -0.54
APOBEC3F-203ENST00000476513 SMIM9A6NGZ8 99 aa11.65□□□□□ -0.54
APOBEC3F-203ENST00000476513 A6NJ64 397 aa11.65□□□□□ -0.54
APOBEC3F-203ENST00000476513 IGKV1-39P01597 117 aa11.65□□□□□ -0.54
APOBEC3F-203ENST00000476513 IGKV1D-39P04432 117 aa11.65□□□□□ -0.54
APOBEC3F-203ENST00000476513 AQP4P55087 323 aa11.65□□□□□ -0.54
APOBEC3F-203ENST00000476513 FAM222AQ5U5X8 452 aa11.65□□□□□ -0.54
APOBEC3F-203ENST00000476513 TMEM88Q6PEY1 159 aa11.65□□□□□ -0.54
APOBEC3F-203ENST00000476513 TMEM230Q96A57 120 aa11.65□□□□□ -0.54
APOBEC3F-203ENST00000476513 RNF167Q9H6Y7 350 aa11.65□□□□□ -0.54
APOBEC3F-203ENST00000476513 RFNGQ9Y644 331 aa11.65□□□□□ -0.54
APOBEC3F-203ENST00000476513 U3KQE9 123 aa11.65□□□□□ -0.54
APOBEC3F-203ENST00000476513 DNAH5Q8TE73 4624 aa11.64□□□□□ -0.55
APOBEC3F-203ENST00000476513 TEX48A0A1B0GUV7 120 aa11.64□□□□□ -0.55
APOBEC3F-203ENST00000476513 FAM90A26D6RGX4 464 aa11.64□□□□□ -0.55
APOBEC3F-203ENST00000476513 CLN5O75503 358 aa11.64□□□□□ -0.55
APOBEC3F-203ENST00000476513 EIF2B2P49770 351 aaKnown RBP11.64□□□□□ -0.55
APOBEC3F-203ENST00000476513 FAM3BP58499 235 aaPredicted RBP11.64□□□□□ -0.55
APOBEC3F-203ENST00000476513 PHLDA2Q53GA4 152 aa11.64□□□□□ -0.55
APOBEC3F-203ENST00000476513 GLMPQ8WWB7 406 aa11.64□□□□□ -0.55
APOBEC3F-203ENST00000476513 YTHDF1Q9BYJ9 559 aaKnown RBP11.64□□□□□ -0.55
APOBEC3F-203ENST00000476513 FNDC4Q9H6D8 234 aaPredicted RBP11.64□□□□□ -0.55
APOBEC3F-203ENST00000476513 IFT46Q9NQC8 304 aa11.64□□□□□ -0.55
APOBEC3F-203ENST00000476513 FAM212BQ9NTI7 297 aaPredicted RBP11.64□□□□□ -0.55
APOBEC3F-203ENST00000476513 DMBT1Q9UGM3 2413 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3F-203ENST00000476513 IGHV3OR16-12A0A075B7B8 117 aa11.63□□□□□ -0.55
APOBEC3F-203ENST00000476513 IGKV1-17P01599 117 aa11.63□□□□□ -0.55
APOBEC3F-203ENST00000476513 PMP2P02689 132 aa11.63□□□□□ -0.55
APOBEC3F-203ENST00000476513 SNCAP37840 140 aa11.63□□□□□ -0.55
APOBEC3F-203ENST00000476513 SCAND1P57086 179 aa11.63□□□□□ -0.55
APOBEC3F-203ENST00000476513 SNRPD3P62318 126 aaKnown RBP11.63□□□□□ -0.55
APOBEC3F-203ENST00000476513 OXA1LQ15070 435 aa11.63□□□□□ -0.55
APOBEC3F-203ENST00000476513 MLANAQ16655 118 aa11.63□□□□□ -0.55
APOBEC3F-203ENST00000476513 IZUMO4Q1ZYL8 232 aa11.63□□□□□ -0.55
APOBEC3F-203ENST00000476513 C16orf54Q6UWD8 224 aa11.63□□□□□ -0.55
APOBEC3F-203ENST00000476513 C6orf223Q8N319 242 aa11.63□□□□□ -0.55
APOBEC3F-203ENST00000476513 MRGPRFQ96AM1 343 aa11.63□□□□□ -0.55
APOBEC3F-203ENST00000476513 DIABLOQ9NR28 239 aa11.63□□□□□ -0.55
APOBEC3F-203ENST00000476513 TMED3Q9Y3Q3 217 aa11.63□□□□□ -0.55
APOBEC3F-203ENST00000476513 NBDYA0A0U1RRE5 68 aa11.62□□□□□ -0.55
APOBEC3F-203ENST00000476513 CLEC2LP0C7M8 214 aa11.62□□□□□ -0.55
APOBEC3F-203ENST00000476513 HLA-DRB4P13762 266 aa11.62□□□□□ -0.55
APOBEC3F-203ENST00000476513 AP2S1P53680 142 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3F-203ENST00000476513 TIGITQ495A1 244 aa11.62□□□□□ -0.55
APOBEC3F-203ENST00000476513 OR4X1Q8NH49 305 aa11.62□□□□□ -0.55
APOBEC3F-203ENST00000476513 ANAPC10Q9UM13 185 aa11.62□□□□□ -0.55
APOBEC3F-203ENST00000476513 HLA-DRB4X5D2U9 266 aa11.62□□□□□ -0.55
APOBEC3F-203ENST00000476513 INS-IGF2F8WCM5 200 aa11.61□□□□□ -0.55
APOBEC3F-203ENST00000476513 CORTO00230 105 aa11.61□□□□□ -0.55
APOBEC3F-203ENST00000476513 RNASE2P10153 161 aaKnown RBP11.61□□□□□ -0.55
APOBEC3F-203ENST00000476513 SDC2P34741 201 aa11.61□□□□□ -0.55
APOBEC3F-203ENST00000476513 FXYD7P58549 80 aa11.61□□□□□ -0.55
APOBEC3F-203ENST00000476513 MXD1Q05195 221 aa11.61□□□□□ -0.55
APOBEC3F-203ENST00000476513 IDNKQ5T6J7 187 aa11.61□□□□□ -0.55
APOBEC3F-203ENST00000476513 SPATA12Q7Z6I5 190 aa11.61□□□□□ -0.55
APOBEC3F-203ENST00000476513 TBC1D26Q86UD7 250 aa11.61□□□□□ -0.55
APOBEC3F-203ENST00000476513 OR5H2Q8NGV7 314 aa11.61□□□□□ -0.55
APOBEC3F-203ENST00000476513 OR6F1Q8NGZ6 308 aa11.61□□□□□ -0.55
APOBEC3F-203ENST00000476513 SEPSECSQ9HD40 501 aaKnown RBP11.61□□□□□ -0.55
APOBEC3F-203ENST00000476513 SCGB2A1O75556 95 aa11.6□□□□□ -0.55
APOBEC3F-203ENST00000476513 IGKV3-20P01619 116 aa11.6□□□□□ -0.55
APOBEC3F-203ENST00000476513 HNRNPCP07910 306 aaKnown RBP eCLIP11.6□□□□□ -0.55
APOBEC3F-203ENST00000476513 OPRK1P41145 380 aa11.6□□□□□ -0.55
APOBEC3F-203ENST00000476513 GDF5OSQ5U4N7 250 aa11.6□□□□□ -0.55
APOBEC3F-203ENST00000476513 SLC35G3Q8N808 338 aa11.6□□□□□ -0.55
APOBEC3F-203ENST00000476513 C15orf53Q8NAA6 179 aa11.6□□□□□ -0.55
APOBEC3F-203ENST00000476513 ZNRF2Q8NHG8 242 aa11.6□□□□□ -0.55
APOBEC3F-203ENST00000476513 ATG101Q9BSB4 218 aa11.6□□□□□ -0.55
APOBEC3F-203ENST00000476513 NRN1Q9NPD7 142 aa11.6□□□□□ -0.55
APOBEC3F-203ENST00000476513 S100GP29377 79 aa11.59□□□□□ -0.55
APOBEC3F-203ENST00000476513 NKX2-1P43699 371 aaPredicted RBP11.59□□□□□ -0.55
APOBEC3F-203ENST00000476513 RPL5P46777 297 aaKnown RBP11.59□□□□□ -0.55
APOBEC3F-203ENST00000476513 SUB1P53999 127 aaKnown RBP eCLIP11.59□□□□□ -0.55
APOBEC3F-203ENST00000476513 TAS2R46P59540 309 aa11.59□□□□□ -0.55
APOBEC3F-203ENST00000476513 DEFB1P60022 68 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms