RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 RARRES2Q99969 163 aa8.96□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 RBM38Q9H0Z9 239 aaKnown RBP8.96□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 MS4A6AQ9H2W1 248 aa8.96□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 C11orf68Q9H3H3 251 aaKnown RBP8.96□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 FNDC4Q9H6D8 234 aaPredicted RBP8.96□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 MRPL36Q9P0J6 103 aaKnown RBP8.96□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 KLK5Q9Y337 293 aaPredicted RBP8.96□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 A0A0G2JRQ6 117 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 DFFBO76075 338 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 CD74P04233 296 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 CD3DP04234 171 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 PI3P19957 117 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 UCP1P25874 307 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 NPBWR1P48145 328 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 TFPI2P48307 235 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 PIGPP57054 158 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 MEF2DQ14814 521 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 SPINK9Q5DT21 86 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 LGALS9CQ6DKI2 356 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 ZNF600Q6ZNG1 722 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 Q6ZRM9 215 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 GBGT1Q8N5D6 347 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 FAM24BQ8N5W8 94 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 DUSP18Q8NEJ0 188 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 SMIM4Q8WVI0 70 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 PINX1Q96BK5 328 aaKnown RBP8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 GINS3Q9BRX5 216 aa8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 PUS1Q9Y606 427 aaKnown RBP eCLIP8.95□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 IGKV3-7A0A075B6H7 116 aa8.94□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 C3orf85A0A1B0GTC6 90 aa8.94□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 CRYBB3P26998 211 aa8.94□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 TNFSF8P32971 234 aa8.94□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 PAFAH1B2P68402 229 aa8.94□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 MLANAQ16655 118 aa8.94□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 RNASE12Q5GAN4 147 aaKnown RBP8.94□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 STEAP1BQ6NZ63 245 aa8.94□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 RPP25LQ8N5L8 163 aaKnown RBP8.94□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 OR4D10Q8NGI6 311 aa8.94□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 OR11H2Q8NH07 326 aa8.94□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 OR4X1Q8NH49 305 aa8.94□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 TERB2Q8NHR7 220 aa8.94□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 U3KQE9 123 aa8.94□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 GSTZ1O43708 216 aaPredicted RBP8.93□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 CLN5O75503 358 aa8.93□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 CDS2O95674 445 aa8.93□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 RAB3DO95716 219 aa8.93□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 IGKV1-17P01599 117 aa8.93□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 SNCAP37840 140 aa8.93□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 ETV6P41212 452 aa8.93□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 OR52E5Q8NH55 327 aa8.93□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 ZFAND1Q8TCF1 268 aa8.93□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 GLYATL2Q8WU03 294 aa8.93□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 DNAH10Q8IVF4 4471 aa8.93□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 VPS13DQ5THJ4 4388 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 DISC1C4P0D8 188 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 K7EQG2 157 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 CORTO00230 105 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 B3GALNT1O75752 331 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 ATG12O94817 140 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 AKAIN1P0CW23 69 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 PGAM2P15259 253 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 SUB1P53999 127 aaKnown RBP eCLIP8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 DEFB131AP59861 70 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 NANOS2P60321 138 aaKnown RBP8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 SP6Q3SY56 376 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 SPANXN2Q5MJ10 180 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 SLC35G3Q8N808 338 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 Q8NAQ8 132 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 OR13C8Q8NGS7 320 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 DCANP1Q8TF63 244 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 GRAMD2BQ96HH9 432 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 SOSTQ9BQB4 213 aa8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 RTBDNQ9BSG5 229 aaPredicted RBP8.92□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 IGHV3-66A0A0C4DH42 116 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 IFNA17P01571 189 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 NPPCP23582 126 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 FAUP35544 74 aaKnown RBP8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 AKR1C2P52895 323 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 PPP5CP53041 499 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 AP3S2P59780 193 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 SPCS3P61009 180 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 TMEM187Q14656 261 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 SCGB2B2Q4G0G5 96 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 PYDC2Q56P42 97 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 LEMD1Q68G75 181 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 TRPT1Q86TN4 253 aaKnown RBP8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 FAM219AQ8IW50 185 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 CCDC71LQ8N9Z2 235 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 LHFPL5Q8TAF8 219 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 C11orf45Q8TAV5 145 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 DEDD2Q8WXF8 326 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 PRRT1Q99946 306 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 MFFQ9GZY8 342 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 TMEM222Q9H0R3 208 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 COPZ2Q9P299 210 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 DNAH6Q9C0G6 4158 aa8.91□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 A0A1W2PS18 150 aa8.9□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 ANKRD20A5PA0PJZ0 165 aa8.9□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 ZNF705EA8MWA4 302 aaPredicted RBP8.9□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 DNASE2O00115 360 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms