RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 PUS1Q9Y606 427 aaKnown RBP eCLIP14.35□□□□□ -0.11
ATG4B-217ENST00000475693 HIVEP2P31629 2446 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 H3BQ15 152 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 AREGP15514 252 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 WT1-ASQ06250 92 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 SLC35E3Q7Z769 313 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 RAB40CQ96S21 281 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 SLC25A33Q9BSK2 321 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 TRAV1-1A0A0B4J248 108 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 ACTL6BO94805 426 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 CNIH1O95406 144 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 AMY1AP04745 511 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 PRCDQ00LT1 54 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 Q6ZS46 218 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 MMD2Q8IY49 270 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 OR4A5Q8NH83 315 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 TAF15Q92804 592 aaKnown RBP eCLIP14.34□□□□□ -0.11
ATG4B-217ENST00000475693 RARRES2Q99969 163 aa14.34□□□□□ -0.11
ATG4B-217ENST00000475693 B4DEV8 164 aa14.33□□□□□ -0.12
ATG4B-217ENST00000475693 OR8G2PQ6IF36 304 aa14.33□□□□□ -0.12
ATG4B-217ENST00000475693 OR1L8Q8NGR8 309 aa14.33□□□□□ -0.12
ATG4B-217ENST00000475693 OR52E5Q8NH55 327 aa14.33□□□□□ -0.12
ATG4B-217ENST00000475693 IFNA10P01566 189 aa14.33□□□□□ -0.12
ATG4B-217ENST00000475693 SRP14P37108 136 aaKnown RBP14.33□□□□□ -0.12
ATG4B-217ENST00000475693 COMPP49747 757 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-217ENST00000475693 RPL23AP62750 156 aaKnown RBP14.33□□□□□ -0.12
ATG4B-217ENST00000475693 CX3CL1P78423 397 aa14.33□□□□□ -0.12
ATG4B-217ENST00000475693 KIAA0141Q14154 515 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-217ENST00000475693 KHDC3LQ587J8 217 aa14.33□□□□□ -0.12
ATG4B-217ENST00000475693 DNLZQ5SXM8 178 aa14.33□□□□□ -0.12
ATG4B-217ENST00000475693 PLEKHA3Q9HB20 300 aa14.33□□□□□ -0.12
ATG4B-217ENST00000475693 WSB1Q9Y6I7 421 aa14.33□□□□□ -0.12
ATG4B-217ENST00000475693 C15orf62A8K5M9 175 aa14.32□□□□□ -0.12
ATG4B-217ENST00000475693 SCAF4O95104 1147 aaKnown RBP14.32□□□□□ -0.12
ATG4B-217ENST00000475693 CCL20P78556 96 aa14.32□□□□□ -0.12
ATG4B-217ENST00000475693 FXYD3Q14802 87 aa14.32□□□□□ -0.12
ATG4B-217ENST00000475693 OR5C1Q8NGR4 320 aa14.32□□□□□ -0.12
ATG4B-217ENST00000475693 OR5B3Q8NH48 314 aa14.32□□□□□ -0.12
ATG4B-217ENST00000475693 SRSF12Q8WXF0 261 aaKnown RBP14.32□□□□□ -0.12
ATG4B-217ENST00000475693 TVP23CQ96ET8 276 aa14.32□□□□□ -0.12
ATG4B-217ENST00000475693 RBM14Q96PK6 669 aaKnown RBP14.32□□□□□ -0.12
ATG4B-217ENST00000475693 GGACTQ9BVM4 153 aa14.32□□□□□ -0.12
ATG4B-217ENST00000475693 ZNF257Q9Y2Q1 563 aa14.32□□□□□ -0.12
ATG4B-217ENST00000475693 HOXA3O43365 443 aaPredicted RBP14.31□□□□□ -0.12
ATG4B-217ENST00000475693 IER3P46695 156 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 RPL27AP46776 148 aaKnown RBP14.31□□□□□ -0.12
ATG4B-217ENST00000475693 RPS10P46783 165 aaKnown RBP14.31□□□□□ -0.12
ATG4B-217ENST00000475693 DYNLT3P51808 116 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 BLCAPP62952 87 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 ICAM4Q14773 271 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 ELOBQ15370 118 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 PDLIM3Q53GG5 364 aaPredicted RBP14.31□□□□□ -0.12
ATG4B-217ENST00000475693 SSMEM1Q8WWF3 244 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 NIPSNAP3BQ9BS92 247 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 FKBP11Q9NYL4 201 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 LINC00527Q9UJ94 153 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 RFNGQ9Y644 331 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 A6NDX4 124 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 TEX22C9J3V5 150 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 TGOLN2O43493 480 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 TAGLN2P37802 199 aaKnown RBP14.31□□□□□ -0.12
ATG4B-217ENST00000475693 MLANAQ16655 118 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 SIGLECL1Q8N7X8 197 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 TMEM242Q9NWH2 141 aa14.31□□□□□ -0.12
ATG4B-217ENST00000475693 IGHV7-81A0A0B4J1V7 117 aa14.3□□□□□ -0.12
ATG4B-217ENST00000475693 DFFBO76075 338 aa14.3□□□□□ -0.12
ATG4B-217ENST00000475693 C9orf152Q5JTZ5 239 aa14.3□□□□□ -0.12
ATG4B-217ENST00000475693 AKR1C8PQ5T2L2 129 aa14.3□□□□□ -0.12
ATG4B-217ENST00000475693 C5orf56Q8N8D9 126 aa14.3□□□□□ -0.12
ATG4B-217ENST00000475693 ABHD5Q8WTS1 349 aa14.3□□□□□ -0.12
ATG4B-217ENST00000475693 RASL11BQ9BPW5 248 aa14.3□□□□□ -0.12
ATG4B-217ENST00000475693 ENY2Q9NPA8 101 aa14.3□□□□□ -0.12
ATG4B-217ENST00000475693 IGLC7A0M8Q6 106 aa14.3□□□□□ -0.12
ATG4B-217ENST00000475693 IGHV3-48P01763 117 aa14.3□□□□□ -0.12
ATG4B-217ENST00000475693 TAS2R30P59541 319 aa14.3□□□□□ -0.12
ATG4B-217ENST00000475693 CD81P60033 236 aa14.3□□□□□ -0.12
ATG4B-217ENST00000475693 TMEM14EPQ6UXP3 125 aa14.3□□□□□ -0.12
ATG4B-217ENST00000475693 ATP5SQ99766 215 aa14.3□□□□□ -0.12
ATG4B-217ENST00000475693 F8P00451 2351 aa14.3□□□□□ -0.12
ATG4B-217ENST00000475693 PMS2P5A8MQ11 134 aa14.29□□□□□ -0.12
ATG4B-217ENST00000475693 DLK1P80370 383 aa14.29□□□□□ -0.12
ATG4B-217ENST00000475693 PNRC1Q12796 327 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-217ENST00000475693 Q6YL49 198 aa14.29□□□□□ -0.12
ATG4B-217ENST00000475693 GAR1Q9NY12 217 aaKnown RBP14.29□□□□□ -0.12
ATG4B-217ENST00000475693 ELOA3CA0A087WX78 387 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-217ENST00000475693 SEC14L6B5MCN3 397 aa14.29□□□□□ -0.12
ATG4B-217ENST00000475693 EGR2P11161 476 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-217ENST00000475693 CD99P14209 185 aa14.29□□□□□ -0.12
ATG4B-217ENST00000475693 S100A2P29034 98 aa14.29□□□□□ -0.12
ATG4B-217ENST00000475693 BPIFB3P59826 476 aa14.29□□□□□ -0.12
ATG4B-217ENST00000475693 ZNF600Q6ZNG1 722 aa14.29□□□□□ -0.12
ATG4B-217ENST00000475693 C9orf139Q6ZV77 190 aa14.29□□□□□ -0.12
ATG4B-217ENST00000475693 Q8WTZ3 238 aa14.29□□□□□ -0.12
ATG4B-217ENST00000475693 TMUB1Q9BVT8 246 aa14.29□□□□□ -0.12
ATG4B-217ENST00000475693 DOK5Q9P104 306 aa14.29□□□□□ -0.12
ATG4B-217ENST00000475693 MFAP2P55001 183 aa14.28□□□□□ -0.12
ATG4B-217ENST00000475693 ZNF562Q6V9R5 426 aa14.28□□□□□ -0.12
ATG4B-217ENST00000475693 SLC24A4Q8NFF2 622 aa14.28□□□□□ -0.12
ATG4B-217ENST00000475693 C1RLQ9NZP8 487 aa14.28□□□□□ -0.12
ATG4B-217ENST00000475693 MOB4Q9Y3A3 225 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms