RNA–Protein interactions for RNA: ENST00000475683.1

TUBA4A-209, Transcript of tubulin alpha 4a, humanhuman

TSL 2

Gene TUBA4A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-209ENST00000475683 S4R3C0 116 aa10.35□□□□□ -0.75
TUBA4A-209ENST00000475683 TSC22D2O75157 780 aa10.34□□□□□ -0.75
TUBA4A-209ENST00000475683 TRGV3P03979 118 aa10.34□□□□□ -0.75
TUBA4A-209ENST00000475683 ELANEP08246 267 aa10.34□□□□□ -0.75
TUBA4A-209ENST00000475683 METTL15P1P0C7V9 234 aa10.34□□□□□ -0.75
TUBA4A-209ENST00000475683 SLC25A4P12235 298 aa10.34□□□□□ -0.75
TUBA4A-209ENST00000475683 PVALBP20472 110 aaPredicted RBP10.34□□□□□ -0.75
TUBA4A-209ENST00000475683 SUB1P53999 127 aaKnown RBP eCLIP10.34□□□□□ -0.75
TUBA4A-209ENST00000475683 RHOGP84095 191 aa10.34□□□□□ -0.75
TUBA4A-209ENST00000475683 FOXE3Q13461 319 aa10.34□□□□□ -0.75
TUBA4A-209ENST00000475683 AKAP14Q86UN6 197 aa10.34□□□□□ -0.75
TUBA4A-209ENST00000475683 TMEM252Q8N6L7 170 aa10.34□□□□□ -0.75
TUBA4A-209ENST00000475683 THAP6Q8TBB0 222 aa10.34□□□□□ -0.75
TUBA4A-209ENST00000475683 MISP3Q96FF7 219 aa10.34□□□□□ -0.75
TUBA4A-209ENST00000475683 GAR1Q9NY12 217 aaKnown RBP10.34□□□□□ -0.75
TUBA4A-209ENST00000475683 U3KQK5 164 aa10.34□□□□□ -0.75
TUBA4A-209ENST00000475683 PRSS46E5RG02 174 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 I3L2K1 104 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 K7EIM0 57 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 CST7O76096 145 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 BRI3O95415 125 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 IGHV3-23P01764 117 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 IFNA4P05014 189 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 P2RY1P47900 373 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 CAV2P51636 162 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 TPPP2P59282 170 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 NHLH2Q02577 135 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 TCTE3Q8IZS6 198 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 RNF152Q8N8N0 203 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 DCUN1D4Q92564 292 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 DPF1Q92782 380 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 PINX1Q96BK5 328 aaKnown RBP10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 PRR25Q96S07 402 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 LYSTQ99698 3801 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 ASCL2Q99929 193 aa10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 LYRM2Q9NU23 88 aaPredicted RBP10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 MRPL36Q9P0J6 103 aaKnown RBP10.33□□□□□ -0.76
TUBA4A-209ENST00000475683 FXYD6-FXYD2A0A087WZ82 144 aa10.32□□□□□ -0.76
TUBA4A-209ENST00000475683 MFSD2BA6NFX1 497 aa10.32□□□□□ -0.76
TUBA4A-209ENST00000475683 H3BUA1 57 aa10.32□□□□□ -0.76
TUBA4A-209ENST00000475683 LY86O95711 162 aa10.32□□□□□ -0.76
TUBA4A-209ENST00000475683 MT-CO2P00403 227 aa10.32□□□□□ -0.76
TUBA4A-209ENST00000475683 HIST1H1BP16401 226 aaKnown RBP10.32□□□□□ -0.76
TUBA4A-209ENST00000475683 RPP30P78346 268 aaKnown RBP10.32□□□□□ -0.76
TUBA4A-209ENST00000475683 FGL1Q08830 312 aa10.32□□□□□ -0.76
TUBA4A-209ENST00000475683 OR8G2PQ6IF36 304 aa10.32□□□□□ -0.76
TUBA4A-209ENST00000475683 TMEM65Q6PI78 240 aa10.32□□□□□ -0.76
TUBA4A-209ENST00000475683 ZNF546Q86UE3 836 aa10.32□□□□□ -0.76
TUBA4A-209ENST00000475683 ZNF491Q8N8L2 437 aa10.32□□□□□ -0.76
TUBA4A-209ENST00000475683 OR1L6Q8NGR2 347 aa10.32□□□□□ -0.76
TUBA4A-209ENST00000475683 MYOZ3Q8TDC0 251 aa10.32□□□□□ -0.76
TUBA4A-209ENST00000475683 SCARB1Q8WTV0 552 aa10.32□□□□□ -0.76
TUBA4A-209ENST00000475683 IGHV3-11P01762 117 aa10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 OR8U8P0C7N1 319 aa10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 RPL12P30050 165 aaKnown RBP10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 ATP5IP56385 69 aaPredicted RBP10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 RAB11AP62491 216 aa10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 EWSR1Q01844 656 aaKnown RBP eCLIP10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 ATP5G2Q06055 141 aa10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 C15orf32Q32M92 178 aa10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 COMMD1Q8N668 190 aa10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 NECAP1Q8NC96 275 aa10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 KLHL30-AS1Q8NEE0 82 aa10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 OR5B12Q96R08 314 aa10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 SLA2Q9H6Q3 261 aa10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 GNB4Q9HAV0 340 aa10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 LSM4Q9Y4Z0 139 aaKnown RBP10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 BIRC6Q9NR09 4857 aa10.31□□□□□ -0.76
TUBA4A-209ENST00000475683 RNF222A6NCQ9 220 aa10.3□□□□□ -0.76
TUBA4A-209ENST00000475683 NUDT19A8MXV4 375 aa10.3□□□□□ -0.76
TUBA4A-209ENST00000475683 F8W735 103 aaPredicted RBP10.3□□□□□ -0.76
TUBA4A-209ENST00000475683 PET100P0DJ07 73 aa10.3□□□□□ -0.76
TUBA4A-209ENST00000475683 DEFB136Q30KP8 78 aa10.3□□□□□ -0.76
TUBA4A-209ENST00000475683 NOXA1Q86UR1 476 aa10.3□□□□□ -0.76
TUBA4A-209ENST00000475683 TMEM217Q8N7C4 229 aa10.3□□□□□ -0.76
TUBA4A-209ENST00000475683 RNASEH2CQ8TDP1 164 aaKnown RBP10.3□□□□□ -0.76
TUBA4A-209ENST00000475683 RAX2Q96IS3 184 aa10.3□□□□□ -0.76
TUBA4A-209ENST00000475683 GPR61Q9BZJ8 451 aa10.3□□□□□ -0.76
TUBA4A-209ENST00000475683 TNFSF18Q9UNG2 199 aa10.3□□□□□ -0.76
TUBA4A-209ENST00000475683 DNAH1Q9P2D7 4330 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 FAM223BA6NKX1 122 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 C1QBP02746 253 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 GPX4P36969 197 aaPredicted RBP10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 MYCNOSP40205 109 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 OPRK1P41145 380 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 SULT1A1P50225 295 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 GAMTQ14353 236 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 FAM223AQ8IWN6 122 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 OR10P1Q8NGE3 313 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 ZNF502Q8TBZ5 544 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 VN1R17PQ8TDU5 208 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 USMG5Q96IX5 58 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 CCDC140Q96MF4 163 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 SLC25A31Q9H0C2 315 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 WFDC1Q9HC57 220 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 THYN1Q9P016 225 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 HSPB11Q9Y547 144 aa10.29□□□□□ -0.76
TUBA4A-209ENST00000475683 STARD9Q9P2P6 4700 aa10.28□□□□□ -0.76
TUBA4A-209ENST00000475683 SORL1Q92673 2214 aa10.28□□□□□ -0.76
TUBA4A-209ENST00000475683 ANKRD34BA5PLL1 514 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms