RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CYTL1Q9NRR1 136 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 FBXL17Q9UF56 701 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 KLK9Q9UKQ9 250 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 F11RQ9Y624 299 aaKnown RBP5.56□□□□□ -1.52
SHQ1-207ENST00000475558 IGSF23A1L1A6 192 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 C15orf62A8K5M9 175 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 PMS2P5A8MQ11 134 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 H3BUX3 64 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 AP4M1O00189 453 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 FCN1O00602 326 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 IGHG2P01859 326 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 IGF1P05019 195 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 RNASE2P10153 161 aaKnown RBP5.55□□□□□ -1.52
SHQ1-207ENST00000475558 CTRB1P17538 263 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 NPBWR1P48145 328 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 CRIP2P52943 208 aaPredicted RBP5.55□□□□□ -1.52
SHQ1-207ENST00000475558 SELENOTP62341 195 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 GNB1P62873 340 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 PRB3Q04118 309 aaPredicted RBP5.55□□□□□ -1.52
SHQ1-207ENST00000475558 CD69Q07108 199 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 DEFB112Q30KQ8 113 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 CTRB2Q6GPI1 263 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 OR8G2PQ6IF36 304 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 TEPPQ6URK8 271 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 C5orf56Q8N8D9 126 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 VN1R17PQ8TDU5 208 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 ABHD5Q8WTS1 349 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 USMG5Q96IX5 58 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 CXorf58Q96LI9 332 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 OR4C12Q96R67 309 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 NPFFR1Q9GZQ6 430 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 WDR61Q9GZS3 305 aaKnown RBP5.55□□□□□ -1.52
SHQ1-207ENST00000475558 WNT10AQ9GZT5 417 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 VPREB3Q9UKI3 123 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 ARHGAP32A7KAX9 2087 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 WNK1Q9H4A3 2382 aa5.55□□□□□ -1.52
SHQ1-207ENST00000475558 NOTCH1P46531 2555 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 IGHV3OR16-10A0A075B7F0 116 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 IGHV7-81A0A0B4J1V7 117 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 A0A0G2JLM5 398 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 IGLC7A0M8Q6 106 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 TEX22C9J3V5 150 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 NXPH3O95157 252 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 OPN1MWP04001 364 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 OPN1MW2P0DN77 364 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 OPN1MW3P0DN78 364 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 SPP1P10451 314 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 CNTFRP26992 372 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 WT1-ASQ06250 92 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 PJVKQ0ZLH3 352 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 CLINT1Q14677 625 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 MRGPRG-AS1Q2M3A8 158 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 AKR1C8PQ5T2L2 129 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 RUSC1-AS1Q66K80 236 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 RPL7L1Q6DKI1 246 aaKnown RBP5.54□□□□□ -1.52
SHQ1-207ENST00000475558 Q6ZRG5 221 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 SLC35E3Q7Z769 313 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 COMMD1Q8N668 190 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 SIGLECL1Q8N7X8 197 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 TMEM116Q8NCL8 245 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 C17orf50Q8WW18 174 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 TAF15Q92804 592 aaKnown RBP eCLIP5.54□□□□□ -1.52
SHQ1-207ENST00000475558 RNF2Q99496 336 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 P2RX4Q99571 388 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 PFDN2Q9UHV9 154 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 WDR83OSQ9Y284 106 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 VWFP04275 2813 aa5.54□□□□□ -1.52
SHQ1-207ENST00000475558 DOCK11Q5JSL3 2073 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 DNAJC9-AS1A6NH13 148 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 H3BP45 60 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 FBXO24O75426 580 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 MT-CO2P00403 227 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 PRH1P02810 166 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 CRYBA1P05813 215 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 RNASE1P07998 156 aaKnown RBP5.53□□□□□ -1.52
SHQ1-207ENST00000475558 MDKP21741 143 aaPredicted RBP5.53□□□□□ -1.52
SHQ1-207ENST00000475558 CD24P25063 80 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 FCGR2BP31994 310 aaPredicted RBP5.53□□□□□ -1.52
SHQ1-207ENST00000475558 TAGLN2P37802 199 aaKnown RBP5.53□□□□□ -1.52
SHQ1-207ENST00000475558 OPRK1P41145 380 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 RPL29P47914 159 aaKnown RBP5.53□□□□□ -1.52
SHQ1-207ENST00000475558 SULT1A2P50226 295 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 MFAP4P55083 255 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 SLC35B1P78383 322 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 ACOT6Q3I5F7 207 aaPredicted RBP5.53□□□□□ -1.52
SHQ1-207ENST00000475558 CLLU1Q5K131 121 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 UNQ5815/PRO19632Q6UWF5 114 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 BTNL8Q6UX41 500 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 NECAP1Q8NC96 275 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 OR10W1Q8NGF6 305 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 OR2G3Q8NGZ4 309 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 OR4X1Q8NH49 305 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 FAM110DQ8TAY7 271 aaPredicted RBP5.53□□□□□ -1.52
SHQ1-207ENST00000475558 TMEM190Q8WZ59 177 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 ZNF48Q96MX3 618 aaPredicted RBP5.53□□□□□ -1.52
SHQ1-207ENST00000475558 SMIM3Q9BZL3 60 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 MED9Q9NWA0 146 aa5.53□□□□□ -1.52
SHQ1-207ENST00000475558 TRBV7-1A0A0A6YYK4 115 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 TRAV41A0A0B4J266 112 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 A0A1B0GUS0 222 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms