RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 WBP1Q96G27 269 aa9.17□□□□□ -0.94
VAPB-204ENST00000475243 RPP21Q9H633 154 aaKnown RBP9.17□□□□□ -0.94
VAPB-204ENST00000475243 TCF23Q7RTU1 214 aa9.17□□□□□ -0.94
VAPB-204ENST00000475243 RNASEH2CQ8TDP1 164 aaKnown RBP9.17□□□□□ -0.94
VAPB-204ENST00000475243 SSBP4Q9BWG4 385 aaPredicted RBP9.17□□□□□ -0.94
VAPB-204ENST00000475243 TRAV12-3A0A0B4J271 114 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 IGKV1D-13A0A0B4J2D9 117 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 ZNF883P0CG24 379 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 IGKV1-13P0DP09 117 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 UCP1P25874 307 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 FOXF2Q12947 444 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 MORN2Q502X0 79 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 C11orf68Q9H3H3 251 aaKnown RBP9.16□□□□□ -0.94
VAPB-204ENST00000475243 TCRBV4S1A1TA0A5B7 111 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 LEPP41159 167 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.16□□□□□ -0.94
VAPB-204ENST00000475243 LYZL4Q96KX0 146 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 PEMTQ9UBM1 199 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 J3QW42 95 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 FBLN7Q53RD9 439 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 CYB5R2Q6BCY4 276 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 SDHCQ99643 169 aaPredicted RBP9.16□□□□□ -0.94
VAPB-204ENST00000475243 CNTFRP26992 372 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 OR10J3Q5JRS4 329 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 DEPPQ9NTK1 212 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 VWA8A3KMH1 1905 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 TRAV40A0A0B4J280 105 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 EFNB1P98172 346 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 ZNF585BQ52M93 769 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 TMEM167AQ8TBQ9 72 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 ATP5IP56385 69 aaPredicted RBP9.16□□□□□ -0.94
VAPB-204ENST00000475243 RHOGP84095 191 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 TMEM219Q86XT9 240 aa9.16□□□□□ -0.94
VAPB-204ENST00000475243 TMEM50AO95807 157 aa9.15□□□□□ -0.94
VAPB-204ENST00000475243 MRPL14Q6P1L8 145 aaKnown RBP9.15□□□□□ -0.94
VAPB-204ENST00000475243 PMCHL2Q9BQD1 86 aa9.15□□□□□ -0.94
VAPB-204ENST00000475243 A0A1B0GTI1 187 aa9.15□□□□□ -0.94
VAPB-204ENST00000475243 OR10W1Q8NGF6 305 aa9.15□□□□□ -0.94
VAPB-204ENST00000475243 HOXA5P20719 270 aa9.15□□□□□ -0.94
VAPB-204ENST00000475243 MEF2CQ06413 473 aaPredicted RBP9.15□□□□□ -0.94
VAPB-204ENST00000475243 FGFBP3Q8TAT2 258 aa9.15□□□□□ -0.94
VAPB-204ENST00000475243 NPFFR1Q9GZQ6 430 aa9.15□□□□□ -0.94
VAPB-204ENST00000475243 TRAV14DV4A0A0A6YYC5 116 aa9.15□□□□□ -0.94
VAPB-204ENST00000475243 IGHV1-18A0A0C4DH31 117 aa9.15□□□□□ -0.94
VAPB-204ENST00000475243 TMEM183AQ8IXX5 376 aa9.15□□□□□ -0.94
VAPB-204ENST00000475243 PYYP10082 97 aa9.15□□□□□ -0.95
VAPB-204ENST00000475243 ZNF324BQ6AW86 544 aaPredicted RBP9.15□□□□□ -0.95
VAPB-204ENST00000475243 ATP5LO75964 103 aa9.15□□□□□ -0.95
VAPB-204ENST00000475243 TMEM95Q3KNT9 176 aa9.15□□□□□ -0.95
VAPB-204ENST00000475243 ZNF497Q6ZNH5 498 aa9.15□□□□□ -0.95
VAPB-204ENST00000475243 SPACA3Q8IXA5 215 aa9.15□□□□□ -0.95
VAPB-204ENST00000475243 ORMDL3Q8N138 153 aa9.15□□□□□ -0.95
VAPB-204ENST00000475243 NUDT10Q8NFP7 164 aa9.15□□□□□ -0.95
VAPB-204ENST00000475243 TMEM133Q9H2Q1 129 aa9.15□□□□□ -0.95
VAPB-204ENST00000475243 VENTXO95231 258 aa9.14□□□□□ -0.95
VAPB-204ENST00000475243 A0A0U1RRA0 63 aa9.14□□□□□ -0.95
VAPB-204ENST00000475243 H3BRM9 83 aa9.14□□□□□ -0.95
VAPB-204ENST00000475243 SRP19P09132 144 aaKnown RBP9.14□□□□□ -0.95
VAPB-204ENST00000475243 CFAP161Q6P656 301 aa9.14□□□□□ -0.95
VAPB-204ENST00000475243 LOC285556D6RIA3 1793 aa9.14□□□□□ -0.95
VAPB-204ENST00000475243 IGHV3-64A0A075B6Q5 118 aa9.14□□□□□ -0.95
VAPB-204ENST00000475243 THBDP07204 575 aa9.14□□□□□ -0.95
VAPB-204ENST00000475243 LRTM2Q8N967 370 aa9.14□□□□□ -0.95
VAPB-204ENST00000475243 PRSS22Q9GZN4 317 aa9.14□□□□□ -0.95
VAPB-204ENST00000475243 FNDC1Q4ZHG4 1894 aaPredicted RBP9.14□□□□□ -0.95
VAPB-204ENST00000475243 PLCE1Q9P212 2302 aa9.14□□□□□ -0.95
VAPB-204ENST00000475243 TMEM42Q69YG0 159 aa9.14□□□□□ -0.95
VAPB-204ENST00000475243 UPK2O00526 184 aa9.14□□□□□ -0.95
VAPB-204ENST00000475243 CACNG8Q8WXS5 425 aa9.14□□□□□ -0.95
VAPB-204ENST00000475243 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.13□□□□□ -0.95
VAPB-204ENST00000475243 YPEL1O60688 119 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 YPEL2Q96QA6 119 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 JMJD8Q96S16 334 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 LINC00114Q6XXX2 140 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 ZNF525Q8N782 197 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 COQ2Q96H96 371 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 VCX2Q9H322 139 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 TICRRQ7Z2Z1 1910 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 A0A1B0GV90 55 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 TIMM23O14925 209 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 IGHV4-39P01824 125 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 CSRP3P50461 194 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 TRGV4A0A0C4DH28 118 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 FABP5P3A8MUU1 101 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 ZNF415Q09FC8 603 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 ZNF600Q6ZNG1 722 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 ZNF319Q9P2F9 582 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 GTSCR1Q86UQ5 136 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 BEND2Q8NDZ0 799 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 C18orf12Q96KH6 178 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 A0A0G2JMZ2 1700 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 LRRC37A2A6NM11 1700 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 C15orf61A6NNL5 157 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 PAX1P15863 534 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 C8orf46Q8TAG6 207 aa9.13□□□□□ -0.95
VAPB-204ENST00000475243 MRPS18CQ9Y3D5 142 aaKnown RBP9.13□□□□□ -0.95
VAPB-204ENST00000475243 TBX6O95947 436 aaPredicted RBP9.12□□□□□ -0.95
VAPB-204ENST00000475243 IGFBP3P17936 291 aaPredicted RBP9.12□□□□□ -0.95
VAPB-204ENST00000475243 KLRD1Q13241 179 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 RNF125Q96EQ8 232 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms