RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 GPR132Q9UNW8 380 aa7.05□□□□□ -1.28
PDPN-204ENST00000475043 IGKV3-7A0A075B6H7 116 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 LOC102724200A0A096LPH7 203 aaPredicted RBP7.04□□□□□ -1.28
PDPN-204ENST00000475043 IGHV3-49A0A0A0MS15 119 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 CORTO00230 105 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 TSPAN4O14817 238 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 GSTZ1O43708 216 aaPredicted RBP7.04□□□□□ -1.28
PDPN-204ENST00000475043 OPRK1P41145 380 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 NPBWR1P48145 328 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 DHODHQ02127 395 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 TMEM268Q5VZI3 342 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 Q6ZRM9 215 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 FAM219AQ8IW50 185 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 TMEM116Q8NCL8 245 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 LHFPL5Q8TAF8 219 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 RBPMSQ93062 196 aaKnown RBP7.04□□□□□ -1.28
PDPN-204ENST00000475043 GGTLC1Q9BX51 225 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 NXF2Q9GZY0 626 aaKnown RBP7.04□□□□□ -1.28
PDPN-204ENST00000475043 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.04□□□□□ -1.28
PDPN-204ENST00000475043 SMPXQ9UHP9 88 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 KCNIP3Q9Y2W7 256 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 TENM3Q9P273 2699 aa7.04□□□□□ -1.28
PDPN-204ENST00000475043 HUWE1Q7Z6Z7 4374 aaKnown RBP7.04□□□□□ -1.28
PDPN-204ENST00000475043 IGHV3OR16-13A0A075B7E8 117 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 TRAV14DV4A0A0A6YYC5 116 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 IGHV3-74A0A0B4J1X5 117 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 IGHV7-4-1A0A0J9YVY3 117 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 OR4C46A6NHA9 309 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 CRYM-AS1A6NIL9 109 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 INS-IGF2F8WCM5 200 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 RNASE2P10153 161 aaKnown RBP7.03□□□□□ -1.28
PDPN-204ENST00000475043 AKR1C4P17516 323 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 FCGR2BP31994 310 aaPredicted RBP7.03□□□□□ -1.28
PDPN-204ENST00000475043 TFPI2P48307 235 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 SPCS3P61009 180 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 PYDC2Q56P42 97 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 SELENOHQ8IZQ5 122 aaKnown RBP7.03□□□□□ -1.28
PDPN-204ENST00000475043 OR10C1Q96KK4 312 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 SCGB3A2Q96PL1 93 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 RNF2Q99496 336 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 GINS3Q9BRX5 216 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 RHPN1-AS1Q9BWJ2 59 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 HEYLQ9NQ87 328 aaPredicted RBP7.03□□□□□ -1.28
PDPN-204ENST00000475043 CACNG5Q9UF02 275 aa7.03□□□□□ -1.28
PDPN-204ENST00000475043 CEBPZOSA8MTT3 80 aa7.02□□□□□ -1.29
PDPN-204ENST00000475043 CHEK1O14757 476 aa7.02□□□□□ -1.29
PDPN-204ENST00000475043 NXPH3O95157 252 aa7.02□□□□□ -1.29
PDPN-204ENST00000475043 S100A5P33763 92 aa7.02□□□□□ -1.29
PDPN-204ENST00000475043 FAUP35544 74 aaKnown RBP7.02□□□□□ -1.29
PDPN-204ENST00000475043 TOMM20LQ6UXN7 152 aa7.02□□□□□ -1.29
PDPN-204ENST00000475043 ZNF600Q6ZNG1 722 aa7.02□□□□□ -1.29
PDPN-204ENST00000475043 TMEM230Q96A57 120 aa7.02□□□□□ -1.29
PDPN-204ENST00000475043 GPR146Q96CH1 333 aa7.02□□□□□ -1.29
PDPN-204ENST00000475043 ZNF414Q96IQ9 312 aa7.02□□□□□ -1.29
PDPN-204ENST00000475043 KRTAP9-9Q9BYP9 154 aa7.02□□□□□ -1.29
PDPN-204ENST00000475043 KRTAP9-4Q9BYQ2 154 aa7.02□□□□□ -1.29
PDPN-204ENST00000475043 PRR13Q9NZ81 148 aa7.02□□□□□ -1.29
PDPN-204ENST00000475043 PUS1Q9Y606 427 aaKnown RBP eCLIP7.02□□□□□ -1.29
PDPN-204ENST00000475043 IGHV3-66A0A0C4DH42 116 aa7.01□□□□□ -1.29
PDPN-204ENST00000475043 SCGB2A1O75556 95 aa7.01□□□□□ -1.29
PDPN-204ENST00000475043 TMEM50AO95807 157 aa7.01□□□□□ -1.29
PDPN-204ENST00000475043 BMI1P35226 326 aa7.01□□□□□ -1.29
PDPN-204ENST00000475043 HTR2BP41595 481 aa7.01□□□□□ -1.29
PDPN-204ENST00000475043 APOC4P55056 127 aa7.01□□□□□ -1.29
PDPN-204ENST00000475043 AP3S2P59780 193 aa7.01□□□□□ -1.29
PDPN-204ENST00000475043 RPL11P62913 178 aaKnown RBP7.01□□□□□ -1.29
PDPN-204ENST00000475043 PAFAH1B2P68402 229 aa7.01□□□□□ -1.29
PDPN-204ENST00000475043 MLANAQ16655 118 aa7.01□□□□□ -1.29
PDPN-204ENST00000475043 ODF3L2Q3SX64 289 aa7.01□□□□□ -1.29
PDPN-204ENST00000475043 TOMM5Q8N4H5 51 aa7.01□□□□□ -1.29
PDPN-204ENST00000475043 GBGT1Q8N5D6 347 aa7.01□□□□□ -1.29
PDPN-204ENST00000475043 OR52E5Q8NH55 327 aa7.01□□□□□ -1.29
PDPN-204ENST00000475043 SOSTQ9BQB4 213 aa7.01□□□□□ -1.29
PDPN-204ENST00000475043 FNDC4Q9H6D8 234 aaPredicted RBP7.01□□□□□ -1.29
PDPN-204ENST00000475043 TMEM56-RWDD3S4R434 201 aa7.01□□□□□ -1.29
PDPN-204ENST00000475043 STAB2Q8WWQ8 2551 aa7□□□□□ -1.29
PDPN-204ENST00000475043 A0A1B0GU03 582 aa7□□□□□ -1.29
PDPN-204ENST00000475043 RPS10-NUDT3A0A1W2PQS6 291 aa7□□□□□ -1.29
PDPN-204ENST00000475043 CLN5O75503 358 aa7□□□□□ -1.29
PDPN-204ENST00000475043 SULT1A3P0DMM9 295 aa7□□□□□ -1.29
PDPN-204ENST00000475043 SULT1A4P0DMN0 295 aa7□□□□□ -1.29
PDPN-204ENST00000475043 ANXA3P12429 323 aa7□□□□□ -1.29
PDPN-204ENST00000475043 RPL35AP18077 110 aaKnown RBP7□□□□□ -1.29
PDPN-204ENST00000475043 NPPCP23582 126 aa7□□□□□ -1.29
PDPN-204ENST00000475043 TMEM187Q14656 261 aa7□□□□□ -1.29
PDPN-204ENST00000475043 BSXQ3C1V8 233 aa7□□□□□ -1.29
PDPN-204ENST00000475043 AARDQ4LEZ3 155 aa7□□□□□ -1.29
PDPN-204ENST00000475043 PVRIGQ6DKI7 326 aa7□□□□□ -1.29
PDPN-204ENST00000475043 TCF24Q7RTU0 167 aa7□□□□□ -1.29
PDPN-204ENST00000475043 LYZL2Q7Z4W2 148 aa7□□□□□ -1.29
PDPN-204ENST00000475043 TMED4Q7Z7H5 227 aa7□□□□□ -1.29
PDPN-204ENST00000475043 WFDC3Q8IUB2 231 aa7□□□□□ -1.29
PDPN-204ENST00000475043 APRG1Q8IVJ8 170 aa7□□□□□ -1.29
PDPN-204ENST00000475043 SLC24A4Q8NFF2 622 aa7□□□□□ -1.29
PDPN-204ENST00000475043 OR4X1Q8NH49 305 aa7□□□□□ -1.29
PDPN-204ENST00000475043 ST8SIA2Q92186 375 aa7□□□□□ -1.29
PDPN-204ENST00000475043 IL22RA2Q969J5 263 aa7□□□□□ -1.29
PDPN-204ENST00000475043 GALNT14Q96FL9 552 aa7□□□□□ -1.29
PDPN-204ENST00000475043 MRPL36Q9P0J6 103 aaKnown RBP7□□□□□ -1.29
PDPN-204ENST00000475043 DNASE2O00115 360 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms