RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 SMIM7Q9BQ49 75 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 SLC25A21Q9BQT8 299 aaPredicted RBP0.49□□□□□ -2.33
HDAC9-222ENST00000474742 SEC22CQ9BRL7 303 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 LINC00467Q9BRT7 94 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 SHANK2-AS3Q9BTD1 123 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 MS4A8Q9BY19 250 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 NPCDR1Q9BY65 106 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 OR2H1Q9GZK4 316 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 C11orf68Q9H3H3 251 aaKnown RBP0.49□□□□□ -2.33
HDAC9-222ENST00000474742 BANF2Q9H503 90 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 TUBA4BQ9H853 241 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 LRTM1Q9HBL6 345 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 POPDC3Q9HBV1 291 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 DAZ1Q9NQZ3 744 aaKnown RBP0.49□□□□□ -2.33
HDAC9-222ENST00000474742 SAR1AQ9NR31 198 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF355PQ9NSJ1 428 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 ASF1BQ9NVP2 202 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 MRPL16Q9NX20 251 aaKnown RBP0.49□□□□□ -2.33
HDAC9-222ENST00000474742 IDI2-AS1Q9NZ38 188 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 IL36BQ9NZH7 164 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 MRPL27Q9P0M9 148 aaKnown RBP0.49□□□□□ -2.33
HDAC9-222ENST00000474742 RPUSD1Q9UJJ7 312 aaKnown RBP0.49□□□□□ -2.33
HDAC9-222ENST00000474742 VPREB3Q9UKI3 123 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 EPDR1Q9UM22 224 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 PSG8Q9UQ74 426 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 FUT9Q9Y231 359 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 HS3ST2Q9Y278 367 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 COQ4Q9Y3A0 265 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 TPRKBQ9Y3C4 175 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 MED31Q9Y3C7 131 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 F11RQ9Y624 299 aaKnown RBP0.49□□□□□ -2.33
HDAC9-222ENST00000474742 LY96Q9Y6Y9 160 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 U3KQ87 197 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 NLRC5Q86WI3 1866 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 KIF13BQ9NQT8 1826 aa0.49□□□□□ -2.33
HDAC9-222ENST00000474742 MYH10P35580 1976 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF638Q14966 1978 aaKnown RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 A2MP01023 1474 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 NCAPD3P42695 1498 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 MUC6Q6W4X9 2439 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 VWA8A3KMH1 1905 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OVOS2A0A0G2JMS6 1433 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OVOS2A0A0J9YW53 1432 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 DISP2A7MBM2 1401 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 NOS1P29475 1434 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OVOS2Q6IE36 1432 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 CCNB3Q8WWL7 1395 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ABCC12Q96J65 1359 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 MED23Q9ULK4 1368 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZSWIM8A7E2V4 1837 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 CHD2O14647 1828 aaKnown RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 BAHCC1Q9P281 2608 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 SETD1AO15047 1707 aaKnown RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 IGKV1-27A0A075B6S5 117 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TRAV14DV4A0A0A6YYC5 116 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 IGHV3-72A0A0B4J1Y9 119 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TRAV41A0A0B4J266 112 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TRAV4A0A0B4J268 109 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 IGHV1-58A0A0C4DH39 117 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 IGKV1-8A0A0C4DH67 115 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 A0A0G2JMM0 328 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 A0A1B0GV90 55 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 A0A1B0GX51 115 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TRDV1A0A1B0GX56 115 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 A0A1B0GXF2 115 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 A0A1W2PPB8 328 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 A0A1W2PRE2 83 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TMEM218A2RU14 115 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 C5orf63A6NC05 138 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 IZUMO1RA6ND01 250 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 FAM24AA6NFZ4 105 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OR51F1A6NGY5 319 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF98A6NK75 572 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 SIGLEC16A6NMB1 481 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TMEM212A6NML5 194 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 COLCA2A8K830 154 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 KIR3DP1A8MWS1 328 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 C4orf51C9J302 202 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 C9JAW5 83 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 C9JCJ5 164 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 C8orf87E5RJ46 101 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 FNDC10F2Z333 226 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 H0YJW9 148 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TMEM250H0YL14 139 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 H3BMG7 143 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 H3BPC8 53 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 H3BT86 120 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 GABARAPH6UMI1 98 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 H7BYZ3 331 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TMEM256-PLSCR3K7ERE1 68 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 M0R143 59 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 M0R233 179 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 UPK1AO00322 258 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 LST1O00453 97 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ISLRO14498 428 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OVOL1O14753 267 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 FFAR1O14842 300 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 LEPROTO15243 131 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 RER1O15258 196 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 PLA2G10O15496 165 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms