RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 C18orf32Q8TCD1 76 aa6.62□□□□□ -1.35
CCDC93-208ENST00000474546 NABP2Q9BQ15 211 aa6.62□□□□□ -1.35
CCDC93-208ENST00000474546 FAM103A1Q9BTL3 118 aaKnown RBP6.62□□□□□ -1.35
CCDC93-208ENST00000474546 MAP1LC3CQ9BXW4 147 aa6.62□□□□□ -1.35
CCDC93-208ENST00000474546 TNFRSF19Q9NS68 423 aa6.62□□□□□ -1.35
CCDC93-208ENST00000474546 TMEM140Q9NV12 185 aa6.62□□□□□ -1.35
CCDC93-208ENST00000474546 DUSP13Q9UII6 198 aa6.62□□□□□ -1.35
CCDC93-208ENST00000474546 AMMECR1Q9Y4X0 333 aaPredicted RBP6.62□□□□□ -1.35
CCDC93-208ENST00000474546 TACC2O95359 2948 aa6.62□□□□□ -1.35
CCDC93-208ENST00000474546 CHD3Q12873 2000 aaKnown RBP6.61□□□□□ -1.35
CCDC93-208ENST00000474546 A0A096LPE4 126 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 A0A1W2PPZ6 126 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 OR7C2O60412 319 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 FCGR3BO75015 233 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 SP1P08047 785 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 HBBP68871 147 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 ERHP84090 104 aaKnown RBP6.61□□□□□ -1.35
CCDC93-208ENST00000474546 PRCDQ00LT1 54 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 FOXF2Q12947 444 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 FAM71F2Q6NXP2 309 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 C6orf15Q6UXA7 325 aaPredicted RBP6.61□□□□□ -1.35
CCDC93-208ENST00000474546 PPP1R32Q7Z5V6 425 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 NIT1Q86X76 327 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 DEFB125Q8N687 156 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 DEFB119Q8N690 84 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 STPG4Q8N801 248 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 ZNF488Q96MN9 340 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 AP1S3Q96PC3 154 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 HS3ST6Q96QI5 342 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 SERTAD4Q9NUC0 356 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 ZNF492Q9P255 531 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 PSG11Q9UQ72 335 aa6.61□□□□□ -1.35
CCDC93-208ENST00000474546 UNC13CQ8NB66 2214 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 LY6G6EA0A0G2JKS1 128 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 NDUFS8O00217 210 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 SLC17A3O00476 420 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 CCL25O15444 150 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 MT-CO3P00414 261 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 OR9G9P0C7N8 305 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 NTF3P20783 257 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 CSN1S1P47710 185 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 HES3Q5TGS1 186 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 PRR27Q6MZM9 219 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 SPATA12Q7Z6I5 190 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 MDP1Q86V88 176 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 OR52L2PQ8NGH6 319 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 OR1N2Q8NGR9 330 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 OSR1Q8TAX0 266 aaPredicted RBP6.6□□□□□ -1.35
CCDC93-208ENST00000474546 FMC1Q96HJ9 113 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 IGF2BP2-AS1Q96M15 143 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 VPS25Q9BRG1 176 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 SLC25A33Q9BSK2 321 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 NDFIP1Q9BT67 221 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 FAM234AQ9H0X4 552 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 GCM1Q9NP62 436 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 U3KQA8 63 aa6.6□□□□□ -1.35
CCDC93-208ENST00000474546 TRBV6-1A0A0K0K1D8 114 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 LINC00473A8K010 186 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 C15orf65H3BRN8 121 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 RRHO14718 337 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 SIVA1O15304 175 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 NDUFB8O95169 186 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 LEPROTL1O95214 131 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 RFPL3SP0C7P2 107 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 SMIM17P0DL12 118 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 MGST1P10620 155 aaKnown RBP6.59□□□□□ -1.35
CCDC93-208ENST00000474546 CD46P15529 392 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 MFAP2P55001 183 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 PRSS12P56730 875 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 UBE2L3P68036 154 aaKnown RBP6.59□□□□□ -1.35
CCDC93-208ENST00000474546 PSG7Q13046 419 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 C3orf36Q3SXR2 165 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 RNFT1Q5M7Z0 435 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 MBNL2Q5VZF2 373 aaKnown RBP6.59□□□□□ -1.35
CCDC93-208ENST00000474546 TCF24Q7RTU0 167 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 BATF2Q8N1L9 274 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 OR2Z1Q8NG97 314 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 DDB2Q92466 427 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 MBD6Q96DN6 1003 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 DAZAP1Q96EP5 407 aaKnown RBP6.59□□□□□ -1.35
CCDC93-208ENST00000474546 COQ2Q96H96 371 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 CLEC7AQ9BXN2 247 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 SEPSECSQ9HD40 501 aaKnown RBP6.59□□□□□ -1.35
CCDC93-208ENST00000474546 OR51B2Q9Y5P1 312 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 ESPL1Q14674 2120 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 KIAA2026Q5HYC2 2103 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 CUBNO60494 3623 aa6.59□□□□□ -1.35
CCDC93-208ENST00000474546 ZNF469Q96JG9 3925 aaPredicted RBP6.58□□□□□ -1.36
CCDC93-208ENST00000474546 PGPEP1LA6NFU8 196 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 OR4C46A6NHA9 309 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 FBLL1A6NHQ2 334 aaKnown RBP6.58□□□□□ -1.36
CCDC93-208ENST00000474546 CORTO00230 105 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 PEX7O00628 323 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 COX7A2P2O60397 106 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 PSPNO60542 156 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 CGAP01215 116 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 APOA2P02652 100 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 GRPP07492 148 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 CELA2AP08217 269 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 SCGB1A1P11684 91 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms