RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 A0A087WX48 190 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 C17orf98A8MV24 154 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 H0YL77 283 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 PDGFAP04085 211 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 GCHFRP30047 84 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 HGFACQ04756 655 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 SPINK9Q5DT21 86 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 AMY1AP04745 511 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 SFTA3P0C7M3 94 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 PSG1P11464 419 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 LGALS3P17931 250 aaKnown RBP3.79□□□□□ -1.8
CCNL1-215ENST00000474539 RPL39P5Q59GN2 51 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 FAAP20Q6NZ36 180 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 ZNF705AQ6ZN79 300 aaPredicted RBP3.79□□□□□ -1.8
CCNL1-215ENST00000474539 REC114Q7Z4M0 266 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 RNF138Q8WVD3 245 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 PARD6GQ9BYG4 376 aaPredicted RBP3.79□□□□□ -1.8
CCNL1-215ENST00000474539 URB1O60287 2271 aaKnown RBP3.79□□□□□ -1.8
CCNL1-215ENST00000474539 H0YJW9 148 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 SLC25A20O43772 301 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 TBX6O95947 436 aaPredicted RBP3.79□□□□□ -1.8
CCNL1-215ENST00000474539 RPL35P42766 123 aaKnown RBP3.79□□□□□ -1.8
CCNL1-215ENST00000474539 FHITP49789 147 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 P2RY4P51582 365 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 SRSF4Q08170 494 aaKnown RBP3.79□□□□□ -1.8
CCNL1-215ENST00000474539 TMEM183BQ1AE95 376 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 ORMDL2Q53FV1 153 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 ST6GALNAC6Q969X2 333 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 ISOC2Q96AB3 205 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 PLSCR3Q9NRY6 295 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 TRAV24A0A0B4J272 114 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 M0R3E3 92 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 NUDT3O95989 172 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 COL8A2P25067 703 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 TDGF1P3P51864 188 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 CRYBA2P53672 197 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 C15orf32Q32M92 178 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 ZNF493Q6ZR52 646 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 LRP11Q86VZ4 500 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 PLPPR1Q8TBJ4 325 aa3.79□□□□□ -1.8
CCNL1-215ENST00000474539 MRPL53Q96EL3 112 aaKnown RBP3.79□□□□□ -1.8
CCNL1-215ENST00000474539 SPAG8Q99932 426 aaPredicted RBP3.79□□□□□ -1.8
CCNL1-215ENST00000474539 HDHD3Q9BSH5 251 aaPredicted RBP3.79□□□□□ -1.8
CCNL1-215ENST00000474539 TRAV39A0A0B4J263 110 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 A6NDN8 102 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 WT1P19544 449 aaPredicted RBP3.78□□□□□ -1.8
CCNL1-215ENST00000474539 DAD1P61803 113 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 IFITM2Q01629 132 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 PDZD11Q5EBL8 140 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 SFTA2Q6UW10 78 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 NDUFA11Q86Y39 141 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 ARL6IP6Q8N6S5 226 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 OR11H6Q8NGC7 330 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 ST20Q9HBF5 79 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 FOXI3A8MTJ6 420 aaPredicted RBP3.78□□□□□ -1.8
CCNL1-215ENST00000474539 PRR32B1ATL7 298 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 M0R2Z0 102 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 PEX7O00628 323 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 ZNF324O75467 553 aaPredicted RBP3.78□□□□□ -1.8
CCNL1-215ENST00000474539 C1QL1O75973 258 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 LGALS1P09382 135 aaKnown RBP3.78□□□□□ -1.8
CCNL1-215ENST00000474539 GZMBP10144 247 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 CFPP27918 469 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 IFI27P40305 119 aaPredicted RBP3.78□□□□□ -1.8
CCNL1-215ENST00000474539 LBHQ53QV2 105 aaPredicted RBP3.78□□□□□ -1.8
CCNL1-215ENST00000474539 ZNF324BQ6AW86 544 aaPredicted RBP3.78□□□□□ -1.8
CCNL1-215ENST00000474539 OR4C5Q8NGB2 326 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 OR10AG1Q8NH19 301 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 TM2D2Q9BX73 214 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 RNF167Q9H6Y7 350 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 IL36RNQ9UBH0 155 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 ZNF253O75346 499 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 ICAM4Q14773 271 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 PMCHL1Q16048 86 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 MIC13Q5XKP0 118 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 C20orf144Q9BQM9 153 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 LAMTOR2Q9Y2Q5 125 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 TSC2P49815 1807 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 ANKRD12Q6UB98 2062 aa3.78□□□□□ -1.8
CCNL1-215ENST00000474539 TGIF2-C20orf24A0A0A6YYL0 155 aa3.78□□□□□ -1.81
CCNL1-215ENST00000474539 EIF3GO75821 320 aaKnown RBP eCLIP3.78□□□□□ -1.81
CCNL1-215ENST00000474539 NAPSAO96009 420 aa3.78□□□□□ -1.81
CCNL1-215ENST00000474539 IGHV3-11P01762 117 aa3.78□□□□□ -1.81
CCNL1-215ENST00000474539 SPNP16150 400 aa3.78□□□□□ -1.81
CCNL1-215ENST00000474539 HBBP68871 147 aa3.78□□□□□ -1.81
CCNL1-215ENST00000474539 ZNF833PQ6ZTB9 187 aa3.78□□□□□ -1.81
CCNL1-215ENST00000474539 TSKUQ8WUA8 353 aa3.78□□□□□ -1.81
CCNL1-215ENST00000474539 PPP1R3EQ9H7J1 279 aa3.78□□□□□ -1.81
CCNL1-215ENST00000474539 NXT2Q9NPJ8 142 aaKnown RBP3.78□□□□□ -1.81
CCNL1-215ENST00000474539 V9GYH0 126 aa3.78□□□□□ -1.81
CCNL1-215ENST00000474539 PCNTO95613 3336 aa3.77□□□□□ -1.81
CCNL1-215ENST00000474539 A8MXK9 166 aa3.77□□□□□ -1.81
CCNL1-215ENST00000474539 TNFRSF6BO95407 300 aa3.77□□□□□ -1.81
CCNL1-215ENST00000474539 CNTFRP26992 372 aa3.77□□□□□ -1.81
CCNL1-215ENST00000474539 CAMPP49913 170 aa3.77□□□□□ -1.81
CCNL1-215ENST00000474539 ZNF138P52744 262 aa3.77□□□□□ -1.81
CCNL1-215ENST00000474539 EFNB2P52799 333 aa3.77□□□□□ -1.81
CCNL1-215ENST00000474539 SUMO2P61956 95 aaKnown RBP3.77□□□□□ -1.81
CCNL1-215ENST00000474539 NMSQ5H8A3 153 aa3.77□□□□□ -1.81
CCNL1-215ENST00000474539 MEIG1Q5JSS6 88 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms