RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CRYGAP11844 174 aa0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 OMPP47874 163 aa0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 CEBPGP53567 150 aa0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 FAM74A1Q5RGS3 127 aa0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 C8orf74Q6P047 294 aa0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 Q6ZQT0 140 aa0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 H1FXQ92522 213 aaKnown RBP0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 NIPSNAP1Q9BPW8 284 aa0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 C6orf62Q9GZU0 229 aaPredicted RBP0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 HS3ST2Q9Y278 367 aa0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 NUP155O75694 1391 aa0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 CACNA1BQ00975 2339 aa0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 ALPK2Q86TB3 2170 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 SNAPC4Q5SXM2 1469 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 MTUS2Q5JR59 1369 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 IFNA5P01569 189 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 HIST1H1EP10412 219 aaKnown RBP0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 CASP1P29466 404 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 SSR2P43308 183 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 RHOBP62745 196 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 KISS1Q15726 138 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 MPV17LQ2QL34 196 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 RNASE10Q5GAN6 216 aaKnown RBP0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 SFXN4Q6P4A7 337 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 LINC00301Q8NCQ3 95 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 TERB2Q8NHR7 220 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 DDI1Q8WTU0 396 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 AMELYQ99218 206 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 C11orf68Q9H3H3 251 aaKnown RBP0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 TECTAO75443 2155 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 CCDC88AQ3V6T2 1871 aa0.63□□□□□ -2.31
ECHDC1-213ENST00000474240 A0A1W2PPM0 123 aa0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 CCDC160A6NGH7 325 aa0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 FAAHO00519 579 aa0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 NCR3O14931 201 aa0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 HIST1H1TP22492 207 aaPredicted RBP0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 RPL5P46777 297 aaKnown RBP0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 OR2F1Q13607 317 aa0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 TEX261Q6UWH6 196 aa0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 OR6V1Q8N148 313 aa0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 OR2T10Q8NGZ9 312 aa0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 KLK6Q92876 244 aa0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 LLPHQ9BRT6 129 aaKnown RBP0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 CMTM6Q9NX76 183 aa0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 VPS29Q9UBQ0 182 aa0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 EPDR1Q9UM22 224 aa0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 CYSLTR1Q9Y271 337 aa0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 U3KQ87 197 aa0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 MYO3BQ8WXR4 1341 aa0.62□□□□□ -2.31
ECHDC1-213ENST00000474240 TENM3Q9P273 2699 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 MED12LQ86YW9 2145 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 HEATR5AQ86XA9 2040 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 A0A087X0T9 212 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 TRAV12-1A0A0B4J245 112 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 C19orf84I3L1E1 186 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 M0R2N4 97 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 AHSA1O95433 338 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 IFNA16P05015 189 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 NKX2-5P52952 324 aaPredicted RBP0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 AP3S2P59780 193 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 SOSTDC1Q6X4U4 206 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 OR10J5Q8NHC4 309 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 BORCS7Q96B45 105 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 C14orf132Q9NPU4 83 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 CDC42SE1Q9NRR8 79 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 NOTCH1P46531 2555 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 TNRC6BQ9UPQ9 1833 aaKnown RBP0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 PEAK1Q9H792 1746 aa0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
ECHDC1-213ENST00000474240 RTL1A6NKG5 1358 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 ECM29Q5VYK3 1845 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 ZNF736B4DX44 427 aaPredicted RBP0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 INE1O15225 51 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 DNAL4O96015 105 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 OR4E1P0C645 316 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 CDC42P60953 191 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 ACOT6Q3I5F7 207 aaPredicted RBP0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 CDKL4Q5MAI5 379 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 LYRM7Q5U5X0 104 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 C2orf82Q6UX34 121 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 GKN2Q86XP6 184 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 TMEM254Q8TBM7 123 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 FAM172AQ8WUF8 416 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 TSPAN32Q96QS1 320 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 HIST1H2BLQ99880 126 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 TRIM4Q9C037 500 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 C20orf27Q9GZN8 174 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 OR51V1Q9H2C8 321 aa0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 KDM6AO15550 1401 aaPredicted RBP0.6□□□□□ -2.31
ECHDC1-213ENST00000474240 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 OR4C46A6NHA9 309 aa0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 SERPINA6P08185 405 aa0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 SMIM10L2AP0DMW4 78 aa0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 SMIM10L2BP0DMW5 78 aa0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 PPIBP23284 216 aaKnown RBP0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 C1orf137Q5JT78 98 aa0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 BRMS1LQ5PSV4 323 aa0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 PTRHD1Q6GMV3 140 aaKnown RBP0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 TRAPPC5Q8IUR0 188 aa0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 C3orf56Q8N813 242 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms