RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 LINC01555Q8NAE3 123 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 PIFOQ8TCI5 191 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 CT55Q8WUE5 264 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 RDH5Q92781 318 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 RAB37Q96AX2 223 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 SNRNP40Q96DI7 357 aaKnown RBP5.97□□□□□ -1.45
GPNMB-209ENST00000474157 ADAT3Q96EY9 351 aaPredicted RBP5.97□□□□□ -1.45
GPNMB-209ENST00000474157 KCNIP2Q9NS61 270 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 ZNF835Q9Y2P0 537 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 OR2W1Q9Y3N9 320 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 CCDC88CQ9P219 2028 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 TICRRQ7Z2Z1 1910 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 SPTAN1Q13813 2472 aaKnown RBP5.96□□□□□ -1.46
GPNMB-209ENST00000474157 PIKFYVEQ9Y2I7 2098 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 ZNF816-ZNF321PA0A0X1KG74 233 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 CTXND1A0A1B0GTU2 59 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 PRSS37A4D1T9 235 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 LINC00473A8K010 186 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 SNURFLB1AK76 121 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 CCDC179H3BU77 68 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 NDUFS4O43181 175 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 SLC25A14O95258 325 aaPredicted RBP5.96□□□□□ -1.46
GPNMB-209ENST00000474157 NUDT14O95848 222 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 APCSP02743 223 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 SLC25A5P05141 298 aaKnown RBP5.96□□□□□ -1.46
GPNMB-209ENST00000474157 MRPL3P09001 348 aaKnown RBP5.96□□□□□ -1.46
GPNMB-209ENST00000474157 ZNF688P0C7X2 276 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 FCGR2BP31994 310 aaPredicted RBP5.96□□□□□ -1.46
GPNMB-209ENST00000474157 PGFP49763 221 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 XGP55808 180 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 TAS2R45P59539 299 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 KRTAP10-2P60368 255 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 NMSQ5H8A3 153 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 C9orf57Q5W0N0 161 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 LCN10Q6JVE6 187 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 C2orf91Q6ZV80 131 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 HAPLN4Q86UW8 402 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 ZNF695Q8IW36 515 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 OR5C1Q8NGR4 320 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 IMUPQ9GZP8 106 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 ZNF665Q9H7R5 613 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 ZNF286AQ9HBT8 521 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 RCL1Q9Y2P8 373 aaKnown RBP5.96□□□□□ -1.46
GPNMB-209ENST00000474157 MPC1Q9Y5U8 109 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 PCNX2A6NKB5 2137 aa5.96□□□□□ -1.46
GPNMB-209ENST00000474157 ABCA12Q86UK0 2595 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 A0A087X0K7 114 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 TEX50A0A1B0GTY4 177 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 FAM90A18PA6NE21 464 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 FAM90A16PA6NEW6 464 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 FAM90A9PA6NNJ1 464 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 KRTAP9-7A8MTY7 169 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 FAM90A5PA8MXJ8 464 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 C9JCJ5 164 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 TNFSF11O14788 317 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 NPFFO15130 113 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 CRLF1O75462 422 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 FAM90A15PP0C7V4 464 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 FAM90A14PP0C7W9 464 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 FCGR2AP12318 317 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 MPV17P39210 176 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 NKX2-1P43699 371 aaPredicted RBP5.95□□□□□ -1.46
GPNMB-209ENST00000474157 NANOS3P60323 173 aaKnown RBP5.95□□□□□ -1.46
GPNMB-209ENST00000474157 WFDC2Q14508 124 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 TMEM187Q14656 261 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 CDKN3Q16667 212 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 TBC1D28Q2M2D7 210 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 ETDBQ3ZM63 59 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 PHLDA2Q53GA4 152 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 IBA57Q5T440 356 aaKnown RBP5.95□□□□□ -1.46
GPNMB-209ENST00000474157 LYSMD4Q5XG99 296 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 EBLN2Q6P2I7 272 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 PQLC2Q6ZP29 291 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 OR1F12Q8NHA8 337 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 ZNF721Q8TF20 911 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 DDB2Q92466 427 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 RASL10AQ92737 203 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 PRELID3AQ96N28 172 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 RAB40CQ96S21 281 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 HRASLS2Q9NWW9 162 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 KCNE3Q9Y6H6 103 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 MYOFQ9NZM1 2061 aa5.95□□□□□ -1.46
GPNMB-209ENST00000474157 PTPRQQ9UMZ3 2332 aa5.94□□□□□ -1.46
GPNMB-209ENST00000474157 NINQ8N4C6 2090 aa5.94□□□□□ -1.46
GPNMB-209ENST00000474157 FRG2CA6NGY1 282 aa5.94□□□□□ -1.46
GPNMB-209ENST00000474157 J3QLI3 93 aa5.94□□□□□ -1.46
GPNMB-209ENST00000474157 SDCBPO00560 298 aaPredicted RBP5.94□□□□□ -1.46
GPNMB-209ENST00000474157 OR2J3O76001 311 aa5.94□□□□□ -1.46
GPNMB-209ENST00000474157 NDUFB2O95178 105 aa5.94□□□□□ -1.46
GPNMB-209ENST00000474157 EML2O95834 649 aa5.94□□□□□ -1.46
GPNMB-209ENST00000474157 NAPSAO96009 420 aa5.94□□□□□ -1.46
GPNMB-209ENST00000474157 RPL7P18124 248 aaKnown RBP5.94□□□□□ -1.46
GPNMB-209ENST00000474157 CBLN1P23435 193 aa5.94□□□□□ -1.46
GPNMB-209ENST00000474157 LMO2P25791 158 aa5.94□□□□□ -1.46
GPNMB-209ENST00000474157 CNTFRP26992 372 aa5.94□□□□□ -1.46
GPNMB-209ENST00000474157 DYNLT3P51808 116 aa5.94□□□□□ -1.46
GPNMB-209ENST00000474157 HBG1P69891 147 aa5.94□□□□□ -1.46
GPNMB-209ENST00000474157 HBG2P69892 147 aa5.94□□□□□ -1.46
GPNMB-209ENST00000474157 DPTQ07507 201 aa5.94□□□□□ -1.46
GPNMB-209ENST00000474157 ZNF415Q09FC8 603 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms