RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 J3KT08 172 aa4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 NKX2-2O95096 273 aa4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 EML2O95834 649 aa4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 MGST1P10620 155 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 ERVK11-1P61568 191 aa4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 MFAP5Q13361 173 aa4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 GUSBP1Q15486 140 aa4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 CDSNQ15517 529 aa4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 C6orf201Q7Z4U5 140 aa4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 PRR22Q8IZ63 422 aa4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 RBMXL3Q8N7X1 1067 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 OR9G1Q8NH87 305 aa4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 C20orf173Q96LM9 149 aa4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 SPACA5Q96QH8 159 aa4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 MDFICQ9P1T7 246 aa4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 OR1A2Q9Y585 309 aa4.19□□□□□ -1.74
TMEM39A-206ENST00000473684 ASIPP42127 132 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 RPL27P61353 136 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 MRPS6P82932 125 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 RTL8BQ17RB0 113 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 TMEM14EPQ6UXP3 125 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 ATP5L2Q7Z4Y8 100 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 OSR2Q8N2R0 312 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 DLL3Q9NYJ7 618 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 NCKAP5O14513 1909 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 SCN3AQ9NY46 2000 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 LOC102723996A0A087X1L8 192 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 TRAV5A0A0B4J249 113 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 IGLL5B9A064 214 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 FAM106CPP0CH98 169 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 AREGP15514 252 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 CCL1P22362 96 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 FOXE3Q13461 319 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 FAM106AQ4KMX7 169 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 IBA57Q5T440 356 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 FAM159AQ6UWV7 190 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 SSX8Q7RTT4 187 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 TMEM178AQ8NBL3 297 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 URB1-AS1Q96HZ7 61 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 HDHD3Q9BSH5 251 aaPredicted RBP4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 C1QTNF5Q9BXJ0 243 aa4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 YTHDF2Q9Y5A9 579 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-206ENST00000473684 CACNA1CQ13936 2221 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 ZNF816-ZNF321PA0A0X1KG74 233 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 LOC101059948A0A1B0GTJ6 334 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 FAM90A8PA6NJQ4 464 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 C2CD4DB7Z1M9 353 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 C4orf51C9J302 202 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 F5H768 121 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 SPINK4O60575 86 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 CTLA4P16410 223 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 CD38P28907 300 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 GLRXP35754 106 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 RPS18P62269 152 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 RPS28P62857 69 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 RPL31P62899 125 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 KISS1Q15726 138 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 DUSP28Q4G0W2 176 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 SLC25A53Q5H9E4 307 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 RNF144BQ7Z419 303 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 C1QL2Q7Z5L3 287 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 RAB42Q8N4Z0 105 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 VN1R2Q8NFZ6 395 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 SRSF8Q9BRL6 282 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 ENY2Q9NPA8 101 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 TMEM131Q92545 1883 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 C17orf51A8MQB3 221 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 PDCD6O75340 191 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 SNCGO76070 127 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 IGHMP01871 453 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 CRYGBP07316 175 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 CSN3P07498 182 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 VWC2Q2TAL6 325 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 LINC00173Q6ZV60 143 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 H1FNTQ75WM6 255 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 HSD11B1LQ7Z5J1 315 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 SMRP1Q8NCR6 262 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 OR2A1Q8NGT9 310 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 OR10J6PQ8NGY7 276 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 IL1F10Q8WWZ1 152 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 NAT6Q93015 286 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 CYYR1Q96J86 154 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 MLST8Q9BVC4 326 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 NPCDR1Q9BY65 106 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 IFI27L2Q9H2X8 130 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 PRTFDC1Q9NRG1 225 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 C19orf25Q9UFG5 118 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 INSIG2Q9Y5U4 225 aa4.17□□□□□ -1.74
TMEM39A-206ENST00000473684 A0A1W2PPI3 338 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 A0A1W2PPV9 198 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 ZNF688P0C7X2 276 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 IAPPP10997 89 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 MPV17P39210 176 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 KIR2DS2P43631 304 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 PRDX1Q06830 199 aaKnown RBP4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 ZNF718Q3SXZ3 478 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 CFAP126Q5VTH2 177 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 TMEM211Q6ICI0 200 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 SFTPA1Q8IWL2 248 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms