RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 PSME3P61289 254 aa0.85□□□□□ -2.27
CLK1-209ENST00000472679 MAGOHP61326 146 aaKnown RBP0.85□□□□□ -2.27
CLK1-209ENST00000472679 Q8N814 137 aa0.85□□□□□ -2.27
CLK1-209ENST00000472679 OR52R1Q8NGF1 315 aa0.85□□□□□ -2.27
CLK1-209ENST00000472679 LINC00526Q96FQ7 95 aa0.85□□□□□ -2.27
CLK1-209ENST00000472679 SLC39A9Q9NUM3 307 aa0.85□□□□□ -2.27
CLK1-209ENST00000472679 ERGIC3Q9Y282 383 aa0.85□□□□□ -2.27
CLK1-209ENST00000472679 TMEM56-RWDD3S4R434 201 aa0.85□□□□□ -2.27
CLK1-209ENST00000472679 PQLC2LA1A4F0 135 aa0.84□□□□□ -2.27
CLK1-209ENST00000472679 ACOT6Q3I5F7 207 aaPredicted RBP0.84□□□□□ -2.27
CLK1-209ENST00000472679 LPCAT3Q6P1A2 487 aa0.84□□□□□ -2.27
CLK1-209ENST00000472679 HIST3H2BBQ8N257 126 aa0.84□□□□□ -2.27
CLK1-209ENST00000472679 TSPAN32Q96QS1 320 aa0.84□□□□□ -2.27
CLK1-209ENST00000472679 AHNAK2Q8IVF2 5795 aa0.84□□□□□ -2.28
CLK1-209ENST00000472679 CEP192Q8TEP8 1941 aa0.83□□□□□ -2.28
CLK1-209ENST00000472679 TNRC6AQ8NDV7 1962 aaKnown RBP0.83□□□□□ -2.28
CLK1-209ENST00000472679 LAMA4Q16363 1823 aa0.83□□□□□ -2.28
CLK1-209ENST00000472679 TRAV9-1A0A075B6T8 112 aa0.83□□□□□ -2.28
CLK1-209ENST00000472679 TRBV6-8A0A0A6YYG3 113 aa0.83□□□□□ -2.28
CLK1-209ENST00000472679 CHP2O43745 196 aa0.83□□□□□ -2.28
CLK1-209ENST00000472679 UBL3O95164 117 aa0.83□□□□□ -2.28
CLK1-209ENST00000472679 MGST1P10620 155 aaKnown RBP0.83□□□□□ -2.28
CLK1-209ENST00000472679 CNBPP62633 177 aaKnown RBP0.83□□□□□ -2.28
CLK1-209ENST00000472679 MIXL1Q9H2W2 232 aa0.83□□□□□ -2.28
CLK1-209ENST00000472679 TAS2R4Q9NYW5 299 aa0.83□□□□□ -2.28
CLK1-209ENST00000472679 MRPL27Q9P0M9 148 aaKnown RBP0.83□□□□□ -2.28
CLK1-209ENST00000472679 UNC79Q9P2D8 2635 aa0.83□□□□□ -2.28
CLK1-209ENST00000472679 NUP155O75694 1391 aa0.83□□□□□ -2.28
CLK1-209ENST00000472679 LYZL6O75951 148 aa0.82□□□□□ -2.28
CLK1-209ENST00000472679 AHSA1O95433 338 aa0.82□□□□□ -2.28
CLK1-209ENST00000472679 IFNA10P01566 189 aa0.82□□□□□ -2.28
CLK1-209ENST00000472679 RHOGP84095 191 aa0.82□□□□□ -2.28
CLK1-209ENST00000472679 PARD6GQ9BYG4 376 aaPredicted RBP0.82□□□□□ -2.28
CLK1-209ENST00000472679 OR4C46A6NHA9 309 aa0.81□□□□□ -2.28
CLK1-209ENST00000472679 GOLGA6L19H0YKK7 550 aa0.81□□□□□ -2.28
CLK1-209ENST00000472679 OR2J2O76002 312 aa0.81□□□□□ -2.28
CLK1-209ENST00000472679 TCL1BO95988 128 aa0.81□□□□□ -2.28
CLK1-209ENST00000472679 BAALC-AS2P0C853 105 aa0.81□□□□□ -2.28
CLK1-209ENST00000472679 SULT1A1P50225 295 aa0.81□□□□□ -2.28
CLK1-209ENST00000472679 CCDC122Q5T0U0 273 aa0.81□□□□□ -2.28
CLK1-209ENST00000472679 SPOPLQ6IQ16 392 aa0.81□□□□□ -2.28
CLK1-209ENST00000472679 KRTAP19-3Q7Z4W3 81 aa0.81□□□□□ -2.28
CLK1-209ENST00000472679 EML5Q05BV3 1969 aa0.81□□□□□ -2.28
CLK1-209ENST00000472679 TRAV3A0A0B4J244 114 aa0.8□□□□□ -2.28
CLK1-209ENST00000472679 TRAV12-1A0A0B4J245 112 aa0.8□□□□□ -2.28
CLK1-209ENST00000472679 TRAV26-2A0A0B4J265 109 aa0.8□□□□□ -2.28
CLK1-209ENST00000472679 M0R2N4 97 aa0.8□□□□□ -2.28
CLK1-209ENST00000472679 CRYZL1O95825 349 aa0.8□□□□□ -2.28
CLK1-209ENST00000472679 IFNA16P05015 189 aa0.8□□□□□ -2.28
CLK1-209ENST00000472679 SFT2D1Q8WV19 159 aa0.8□□□□□ -2.28
CLK1-209ENST00000472679 ACER3Q9NUN7 267 aa0.8□□□□□ -2.28
CLK1-209ENST00000472679 DEFB113Q30KQ7 82 aa0.79□□□□□ -2.28
CLK1-209ENST00000472679 GDF5OSQ5U4N7 250 aa0.79□□□□□ -2.28
CLK1-209ENST00000472679 ROBO3Q96MS0 1386 aa0.79□□□□□ -2.28
CLK1-209ENST00000472679 ADGRB2O60241 1585 aa0.79□□□□□ -2.28
CLK1-209ENST00000472679 ECM29Q5VYK3 1845 aa0.78□□□□□ -2.28
CLK1-209ENST00000472679 FAM236DA0A1B0GTK5 79 aa0.78□□□□□ -2.28
CLK1-209ENST00000472679 SULT1B1O43704 296 aa0.78□□□□□ -2.28
CLK1-209ENST00000472679 OR2B3O76000 313 aa0.78□□□□□ -2.28
CLK1-209ENST00000472679 SMIM10L2AP0DMW4 78 aa0.78□□□□□ -2.28
CLK1-209ENST00000472679 SMIM10L2BP0DMW5 78 aa0.78□□□□□ -2.28
CLK1-209ENST00000472679 FAM236CP0DP71 79 aa0.78□□□□□ -2.28
CLK1-209ENST00000472679 OR13D1Q8NGV5 346 aa0.78□□□□□ -2.28
CLK1-209ENST00000472679 GPR146Q96CH1 333 aa0.78□□□□□ -2.28
CLK1-209ENST00000472679 C8orf76Q96K31 380 aa0.78□□□□□ -2.28
CLK1-209ENST00000472679 OSTCQ9NRP0 149 aa0.78□□□□□ -2.28
CLK1-209ENST00000472679 VPS29Q9UBQ0 182 aa0.78□□□□□ -2.28
CLK1-209ENST00000472679 ZNF106Q9H2Y7 1883 aaKnown RBP0.78□□□□□ -2.29
CLK1-209ENST00000472679 MCM3APO60318 1980 aa0.77□□□□□ -2.29
CLK1-209ENST00000472679 M0R036 132 aa0.77□□□□□ -2.29
CLK1-209ENST00000472679 INE1O15225 51 aa0.77□□□□□ -2.29
CLK1-209ENST00000472679 LINC01554Q52M75 96 aa0.77□□□□□ -2.29
CLK1-209ENST00000472679 C1orf137Q5JT78 98 aa0.77□□□□□ -2.29
CLK1-209ENST00000472679 Q8N6K4 173 aa0.77□□□□□ -2.29
CLK1-209ENST00000472679 OR10J5Q8NHC4 309 aa0.77□□□□□ -2.29
CLK1-209ENST00000472679 DCUN1D1Q96GG9 259 aa0.77□□□□□ -2.29
CLK1-209ENST00000472679 C20orf27Q9GZN8 174 aa0.77□□□□□ -2.29
CLK1-209ENST00000472679 DCSTAMPQ9H295 470 aa0.77□□□□□ -2.29
CLK1-209ENST00000472679 NEO1Q92859 1461 aa0.77□□□□□ -2.29
CLK1-209ENST00000472679 CLDN24A6NM45 220 aa0.76□□□□□ -2.29
CLK1-209ENST00000472679 IMPG1Q17R60 797 aa0.76□□□□□ -2.29
CLK1-209ENST00000472679 CLDN22Q8N7P3 220 aa0.76□□□□□ -2.29
CLK1-209ENST00000472679 OR51V1Q9H2C8 321 aa0.76□□□□□ -2.29
CLK1-209ENST00000472679 CDC42SE1Q9NRR8 79 aa0.76□□□□□ -2.29
CLK1-209ENST00000472679 SCN3AQ9NY46 2000 aa0.76□□□□□ -2.29
CLK1-209ENST00000472679 PIRO00625 290 aa0.75□□□□□ -2.29
CLK1-209ENST00000472679 TTRP02766 147 aa0.75□□□□□ -2.29
CLK1-209ENST00000472679 SERPINA6P08185 405 aa0.75□□□□□ -2.29
CLK1-209ENST00000472679 ZNF25P17030 456 aaPredicted RBP0.75□□□□□ -2.29
CLK1-209ENST00000472679 C3orf56Q8N813 242 aa0.75□□□□□ -2.29
CLK1-209ENST00000472679 HS3ST2Q9Y278 367 aa0.75□□□□□ -2.29
CLK1-209ENST00000472679 PLXND1Q9Y4D7 1925 aa0.74□□□□□ -2.29
CLK1-209ENST00000472679 CNIH1O95406 144 aa0.74□□□□□ -2.29
CLK1-209ENST00000472679 S100A4P26447 101 aaKnown RBP0.74□□□□□ -2.29
CLK1-209ENST00000472679 TRAPPC6BQ86SZ2 158 aa0.74□□□□□ -2.29
CLK1-209ENST00000472679 AMELYQ99218 206 aa0.74□□□□□ -2.29
CLK1-209ENST00000472679 CNTRLQ7Z7A1 2325 aa0.73□□□□□ -2.29
CLK1-209ENST00000472679 CCDC160A6NGH7 325 aa0.73□□□□□ -2.29
CLK1-209ENST00000472679 ZNF736B4DX44 427 aaPredicted RBP0.73□□□□□ -2.29
CLK1-209ENST00000472679 PROSCO94903 275 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms