RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 UBE2MP61081 183 aaKnown RBP5.17□□□□□ -1.58
SCN9A-206ENST00000472119 SRPXP78539 464 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 RHOGP84095 191 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 WT1-ASQ06250 92 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 CTRB2Q6GPI1 263 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 LYG2Q86SG7 212 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 FAM219AQ8IW50 185 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 OR4F17Q8NGA8 305 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 OR52B4Q8NGK2 314 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 OR5B3Q8NH48 314 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 MYOZ3Q8TDC0 251 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 IL22RA2Q969J5 263 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 LSM10Q969L4 123 aaKnown RBP5.17□□□□□ -1.58
SCN9A-206ENST00000472119 UBE2E2Q96LR5 201 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 OR4F4Q96R69 305 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 SEC22CQ9BRL7 303 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 SLA2Q9H6Q3 261 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 CACNG5Q9UF02 275 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 SHPKQ9UHJ6 478 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 ZNF257Q9Y2Q1 563 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 S4R3C0 116 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 TET2Q6N021 2002 aaPredicted RBP5.17□□□□□ -1.58
SCN9A-206ENST00000472119 VWFP04275 2813 aa5.17□□□□□ -1.58
SCN9A-206ENST00000472119 C13orf42A0A1B0GVH6 325 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 H3BUA1 57 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 CCL24O00175 119 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 ADAP1O75689 374 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 NDUFB8O95169 186 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 DUS4LO95620 317 aaKnown RBP5.16□□□□□ -1.58
SCN9A-206ENST00000472119 FGF2P09038 288 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 SULT1A3P0DMM9 295 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 SULT1A4P0DMN0 295 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 SPNP16150 400 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 KRTAP10-12P60413 245 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 PRCDQ00LT1 54 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 ATP5G2Q06055 141 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 NMSQ5H8A3 153 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 GGNBP1Q5YKI7 109 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 SLC25A24Q6NUK1 477 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 ZNF429Q86V71 674 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 LRTM2Q8N967 370 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 UXS1Q8NBZ7 420 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 OR11H1Q8NG94 326 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 OR1N2Q8NGR9 330 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 COQ8AQ8NI60 647 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 C4orf3Q8WVX3 66 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 SRSF8Q9BRL6 282 aaKnown RBP5.16□□□□□ -1.58
SCN9A-206ENST00000472119 PDCD10Q9BUL8 212 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 PLEKHA3Q9HB20 300 aa5.16□□□□□ -1.58
SCN9A-206ENST00000472119 IGLV11-55A0A075B6I3 123 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 IGHV4OR15-8A0A075B7B6 117 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 A0A087WW49 117 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 TRBV9A0A0B4J1U6 114 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 IGHV3-21A0A0B4J1V1 117 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 A0A0G2JLM5 398 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 DUXBA0A1W2PPF3 345 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 CEBPZOSA8MTT3 80 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 MPTX1A8MV57 137 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 INMT-MINDY4F8WBC2 141 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 I3L521 148 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 BRI3O95415 125 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 DHFRP00374 187 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 IGHV3-23P01764 117 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 LGALS1P09382 135 aaKnown RBP5.15□□□□□ -1.59
SCN9A-206ENST00000472119 MYCNOSP40205 109 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 HOXA1P49639 335 aaPredicted RBP5.15□□□□□ -1.59
SCN9A-206ENST00000472119 MFAP2P55001 183 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 SPCS3P61009 180 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 ERHP84090 104 aaKnown RBP5.15□□□□□ -1.59
SCN9A-206ENST00000472119 SMCO1Q147U7 214 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 C15orf32Q32M92 178 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 THOC7Q6I9Y2 204 aaKnown RBP5.15□□□□□ -1.59
SCN9A-206ENST00000472119 HSD17B13Q7Z5P4 300 aaPredicted RBP5.15□□□□□ -1.59
SCN9A-206ENST00000472119 OR2C3Q8N628 320 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 NECAP1Q8NC96 275 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 DUSP18Q8NEJ0 188 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 OR1S1Q8NH92 325 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 MITD1Q8WV92 249 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 USMG5Q96IX5 58 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 P2RX4Q99571 388 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 ENY2Q9NPA8 101 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 HEYLQ9NQ87 328 aaPredicted RBP5.15□□□□□ -1.59
SCN9A-206ENST00000472119 TMED3Q9Y3Q3 217 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 F11RQ9Y624 299 aaKnown RBP5.15□□□□□ -1.59
SCN9A-206ENST00000472119 PKD1L1Q8TDX9 2849 aa5.15□□□□□ -1.59
SCN9A-206ENST00000472119 PIGBOS1A0A0B4J2F0 54 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 A0A1B0GU03 582 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 MFSD2BA6NFX1 497 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 FAM223BA6NKX1 122 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 CCSO14618 274 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 PITX3O75364 302 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 IFNA21P01568 189 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 TRBV12-3P01733 135 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 HSPB1P04792 205 aaKnown RBP5.14□□□□□ -1.59
SCN9A-206ENST00000472119 HIST1H1BP16401 226 aaKnown RBP5.14□□□□□ -1.59
SCN9A-206ENST00000472119 SNCAP37840 140 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 RUNX1Q01196 453 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 TNFRSF9Q07011 255 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 EXOSC2Q13868 293 aaKnown RBP5.14□□□□□ -1.59
SCN9A-206ENST00000472119 AARDQ4LEZ3 155 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms