RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 TSC22D3Q99576 134 aa13.45□□□□□ -0.26
SORT1-203ENST00000471996 HELTA6NFD8 242 aa13.44□□□□□ -0.26
SORT1-203ENST00000471996 EPM2AB3EWF7 344 aa13.44□□□□□ -0.26
SORT1-203ENST00000471996 RLN1P04808 185 aa13.44□□□□□ -0.26
SORT1-203ENST00000471996 DHRS2Q13268 280 aa13.44□□□□□ -0.26
SORT1-203ENST00000471996 TBCEQ15813 527 aaPredicted RBP13.44□□□□□ -0.26
SORT1-203ENST00000471996 FAM222AQ5U5X8 452 aa13.44□□□□□ -0.26
SORT1-203ENST00000471996 CNBD2Q96M20 576 aa13.44□□□□□ -0.26
SORT1-203ENST00000471996 H3BMM0 161 aa13.43□□□□□ -0.26
SORT1-203ENST00000471996 PGLYRP1O75594 196 aaPredicted RBP13.43□□□□□ -0.26
SORT1-203ENST00000471996 INAFM2P0DMQ5 153 aa13.43□□□□□ -0.26
SORT1-203ENST00000471996 RFNGQ9Y644 331 aa13.43□□□□□ -0.26
SORT1-203ENST00000471996 ATP6V1G2O95670 118 aa13.42□□□□□ -0.26
SORT1-203ENST00000471996 PPP5CP53041 499 aa13.42□□□□□ -0.26
SORT1-203ENST00000471996 GABARAPL2P60520 117 aa13.42□□□□□ -0.26
SORT1-203ENST00000471996 PRCDQ00LT1 54 aa13.42□□□□□ -0.26
SORT1-203ENST00000471996 C15orf53Q8NAA6 179 aa13.42□□□□□ -0.26
SORT1-203ENST00000471996 TSPAN14Q8NG11 270 aa13.42□□□□□ -0.26
SORT1-203ENST00000471996 ZNRF2Q8NHG8 242 aa13.42□□□□□ -0.26
SORT1-203ENST00000471996 NARS2Q96I59 477 aaKnown RBP13.42□□□□□ -0.26
SORT1-203ENST00000471996 ATG101Q9BSB4 218 aa13.42□□□□□ -0.26
SORT1-203ENST00000471996 SMIM30A4D0T7 59 aa13.41□□□□□ -0.26
SORT1-203ENST00000471996 EIF2B2P49770 351 aaKnown RBP13.41□□□□□ -0.26
SORT1-203ENST00000471996 HERV-K104P61576 105 aa13.41□□□□□ -0.26
SORT1-203ENST00000471996 ERHP84090 104 aaKnown RBP13.41□□□□□ -0.26
SORT1-203ENST00000471996 Q9H521 79 aa13.41□□□□□ -0.26
SORT1-203ENST00000471996 IGHV3OR16-12A0A075B7B8 117 aa13.4□□□□□ -0.26
SORT1-203ENST00000471996 TRDV1A0A1B0GX56 115 aa13.4□□□□□ -0.26
SORT1-203ENST00000471996 FCER2P06734 321 aa13.4□□□□□ -0.26
SORT1-203ENST00000471996 SNRPD3P62318 126 aaKnown RBP13.4□□□□□ -0.26
SORT1-203ENST00000471996 OR5AP2Q8NGF4 316 aa13.4□□□□□ -0.26
SORT1-203ENST00000471996 NOTOA8MTQ0 251 aa13.39□□□□□ -0.27
SORT1-203ENST00000471996 HLA-DRB4P13762 266 aa13.39□□□□□ -0.27
SORT1-203ENST00000471996 AP2S1P53680 142 aaPredicted RBP13.39□□□□□ -0.27
SORT1-203ENST00000471996 HSPE1P61604 102 aaKnown RBP13.39□□□□□ -0.27
SORT1-203ENST00000471996 OR4A16Q8NH70 328 aa13.39□□□□□ -0.27
SORT1-203ENST00000471996 SEPSECSQ9HD40 501 aaKnown RBP13.39□□□□□ -0.27
SORT1-203ENST00000471996 U3KQE9 123 aa13.39□□□□□ -0.27
SORT1-203ENST00000471996 HLA-DRB4X5D2U9 266 aa13.39□□□□□ -0.27
SORT1-203ENST00000471996 MYCBP2O75592 4640 aa13.39□□□□□ -0.27
SORT1-203ENST00000471996 TRAV18A0A075B6X5 111 aa13.38□□□□□ -0.27
SORT1-203ENST00000471996 FAM90A26D6RGX4 464 aa13.38□□□□□ -0.27
SORT1-203ENST00000471996 KRTAP10-2P60368 255 aa13.38□□□□□ -0.27
SORT1-203ENST00000471996 C22orf42Q6IC83 251 aa13.38□□□□□ -0.27
SORT1-203ENST00000471996 LGALS14Q8TCE9 139 aa13.38□□□□□ -0.27
SORT1-203ENST00000471996 GLMPQ8WWB7 406 aa13.38□□□□□ -0.27
SORT1-203ENST00000471996 TMEM230Q96A57 120 aa13.38□□□□□ -0.27
SORT1-203ENST00000471996 NDUFB11Q9NX14 153 aa13.38□□□□□ -0.27
SORT1-203ENST00000471996 RHBDL2Q9NX52 303 aa13.38□□□□□ -0.27
SORT1-203ENST00000471996 CLN5O75503 358 aa13.37□□□□□ -0.27
SORT1-203ENST00000471996 C16orf54Q6UWD8 224 aa13.37□□□□□ -0.27
SORT1-203ENST00000471996 DHRS11Q6UWP2 260 aa13.37□□□□□ -0.27
SORT1-203ENST00000471996 CMTM1Q8IZ96 169 aa13.37□□□□□ -0.27
SORT1-203ENST00000471996 SEC22AQ96IW7 307 aa13.37□□□□□ -0.27
SORT1-203ENST00000471996 MRPL36Q9P0J6 103 aaKnown RBP13.37□□□□□ -0.27
SORT1-203ENST00000471996 DAPK2Q9UIK4 370 aa13.37□□□□□ -0.27
SORT1-203ENST00000471996 DAD1P61803 113 aa13.36□□□□□ -0.27
SORT1-203ENST00000471996 GSG1LQ6UXU4 331 aa13.36□□□□□ -0.27
SORT1-203ENST00000471996 H2BFWTQ7Z2G1 175 aa13.36□□□□□ -0.27
SORT1-203ENST00000471996 FCGR1BQ92637 280 aa13.36□□□□□ -0.27
SORT1-203ENST00000471996 YTHDF2Q9Y5A9 579 aaKnown RBP13.36□□□□□ -0.27
SORT1-203ENST00000471996 SNCAP37840 140 aa13.35□□□□□ -0.27
SORT1-203ENST00000471996 FXYD7P58549 80 aa13.35□□□□□ -0.27
SORT1-203ENST00000471996 OR4X1Q8NH49 305 aa13.35□□□□□ -0.27
SORT1-203ENST00000471996 ZNF2Q9BSG1 426 aaPredicted RBP13.35□□□□□ -0.27
SORT1-203ENST00000471996 EHFQ9NZC4 300 aa13.35□□□□□ -0.27
SORT1-203ENST00000471996 CORTO00230 105 aa13.34□□□□□ -0.27
SORT1-203ENST00000471996 GPR31O00270 319 aa13.34□□□□□ -0.27
SORT1-203ENST00000471996 SCGB2A1O75556 95 aa13.34□□□□□ -0.27
SORT1-203ENST00000471996 IGKV1-17P01599 117 aa13.34□□□□□ -0.27
SORT1-203ENST00000471996 NKX2-1P43699 371 aaPredicted RBP13.34□□□□□ -0.27
SORT1-203ENST00000471996 CBX5P45973 191 aa13.34□□□□□ -0.27
SORT1-203ENST00000471996 HOXA1P49639 335 aaPredicted RBP13.34□□□□□ -0.27
SORT1-203ENST00000471996 SPINK9Q5DT21 86 aa13.34□□□□□ -0.27
SORT1-203ENST00000471996 FNDC4Q9H6D8 234 aaPredicted RBP13.34□□□□□ -0.27
SORT1-203ENST00000471996 NRN1Q9NPD7 142 aa13.34□□□□□ -0.27
SORT1-203ENST00000471996 FAM212BQ9NTI7 297 aaPredicted RBP13.34□□□□□ -0.27
SORT1-203ENST00000471996 VPS13BQ7Z7G8 4022 aa13.34□□□□□ -0.27
SORT1-203ENST00000471996 LOC102723971A0A1B0GUV8 181 aa13.33□□□□□ -0.28
SORT1-203ENST00000471996 INS-IGF2F8WCM5 200 aa13.33□□□□□ -0.28
SORT1-203ENST00000471996 IGKV3-20P01619 116 aa13.33□□□□□ -0.28
SORT1-203ENST00000471996 HBE1P02100 147 aa13.33□□□□□ -0.28
SORT1-203ENST00000471996 HNRNPCP07910 306 aaKnown RBP eCLIP13.33□□□□□ -0.28
SORT1-203ENST00000471996 RFX2P48378 723 aa13.33□□□□□ -0.28
SORT1-203ENST00000471996 TIGITQ495A1 244 aa13.33□□□□□ -0.28
SORT1-203ENST00000471996 GDF5OSQ5U4N7 250 aa13.33□□□□□ -0.28
SORT1-203ENST00000471996 SPARTQ8N0X7 666 aa13.33□□□□□ -0.28
SORT1-203ENST00000471996 AUNIPQ9H7T9 357 aa13.33□□□□□ -0.28
SORT1-203ENST00000471996 MEIS3P1A6NDR6 274 aa13.32□□□□□ -0.28
SORT1-203ENST00000471996 IGKV1-39P01597 117 aa13.32□□□□□ -0.28
SORT1-203ENST00000471996 IGKV1D-39P04432 117 aa13.32□□□□□ -0.28
SORT1-203ENST00000471996 ALDH3B2P48448 385 aa13.32□□□□□ -0.28
SORT1-203ENST00000471996 MLANAQ16655 118 aa13.32□□□□□ -0.28
SORT1-203ENST00000471996 SFXN4Q6P4A7 337 aa13.32□□□□□ -0.28
SORT1-203ENST00000471996 ZNF709Q8N972 641 aa13.32□□□□□ -0.28
SORT1-203ENST00000471996 SLC25A38Q96DW6 304 aa13.32□□□□□ -0.28
SORT1-203ENST00000471996 FXYD6Q9H0Q3 95 aa13.32□□□□□ -0.28
SORT1-203ENST00000471996 RRP15Q9Y3B9 282 aaKnown RBP13.32□□□□□ -0.28
SORT1-203ENST00000471996 GOLT1BQ9Y3E0 138 aa13.32□□□□□ -0.28
SORT1-203ENST00000471996 A0A0A6YYH2 397 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms