RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 TREM1Q9NP99 234 aa20.5■□□□□ 0.87
U2AF1-208ENST00000471250 MAP1LC3B2A6NCE7 125 aa20.49■□□□□ 0.87
U2AF1-208ENST00000471250 A6NDX4 124 aa20.49■□□□□ 0.87
U2AF1-208ENST00000471250 SEC14L6B5MCN3 397 aa20.49■□□□□ 0.87
U2AF1-208ENST00000471250 MT-CO2P00403 227 aa20.49■□□□□ 0.87
U2AF1-208ENST00000471250 IGHV3-48P01763 117 aa20.49■□□□□ 0.87
U2AF1-208ENST00000471250 GCSAMLQ5JQS6 135 aa20.49■□□□□ 0.87
U2AF1-208ENST00000471250 PBDC1Q9BVG4 233 aa20.49■□□□□ 0.87
U2AF1-208ENST00000471250 MAP1LC3BQ9GZQ8 125 aa20.49■□□□□ 0.87
U2AF1-208ENST00000471250 SLC25A22Q9H936 323 aa20.49■□□□□ 0.87
U2AF1-208ENST00000471250 PRRC2AP48634 2157 aaKnown RBP20.49■□□□□ 0.87
U2AF1-208ENST00000471250 H3BUX3 64 aa20.48■□□□□ 0.87
U2AF1-208ENST00000471250 I3L2K1 104 aa20.48■□□□□ 0.87
U2AF1-208ENST00000471250 RND2P52198 227 aa20.48■□□□□ 0.87
U2AF1-208ENST00000471250 TMEM218A2RU14 115 aa20.48■□□□□ 0.87
U2AF1-208ENST00000471250 CDC34P49427 236 aaPredicted RBP20.48■□□□□ 0.87
U2AF1-208ENST00000471250 CYP2G1PQ6ZSU1 146 aa20.48■□□□□ 0.87
U2AF1-208ENST00000471250 TMEM116Q8NCL8 245 aa20.48■□□□□ 0.87
U2AF1-208ENST00000471250 SGMS2Q8NHU3 365 aa20.48■□□□□ 0.87
U2AF1-208ENST00000471250 NANPQ8TBE9 248 aa20.48■□□□□ 0.87
U2AF1-208ENST00000471250 RAB24Q969Q5 203 aa20.48■□□□□ 0.87
U2AF1-208ENST00000471250 IGKV1D-37A0A075B6S9 117 aa20.47■□□□□ 0.87
U2AF1-208ENST00000471250 FGF8P55075 233 aaPredicted RBP20.47■□□□□ 0.87
U2AF1-208ENST00000471250 PEA15Q15121 130 aa20.47■□□□□ 0.87
U2AF1-208ENST00000471250 C22orf15Q8WYQ4 148 aa20.47■□□□□ 0.87
U2AF1-208ENST00000471250 NARS2Q96I59 477 aaKnown RBP20.47■□□□□ 0.87
U2AF1-208ENST00000471250 EIF5A2Q9GZV4 153 aaKnown RBP20.46■□□□□ 0.87
U2AF1-208ENST00000471250 TCRBV4S1A1TA0A5B7 111 aa20.45■□□□□ 0.86
U2AF1-208ENST00000471250 AMY1AP04745 511 aa20.45■□□□□ 0.86
U2AF1-208ENST00000471250 BCL6BQ8N143 479 aaPredicted RBP20.45■□□□□ 0.86
U2AF1-208ENST00000471250 PITPNC1Q9UKF7 332 aa20.45■□□□□ 0.86
U2AF1-208ENST00000471250 IGHV3-21A0A0B4J1V1 117 aa20.45■□□□□ 0.86
U2AF1-208ENST00000471250 A0A1W2PPV4 95 aa20.45■□□□□ 0.86
U2AF1-208ENST00000471250 RBFOX3A6NFN3 312 aa20.45■□□□□ 0.86
U2AF1-208ENST00000471250 EIF3GO75821 320 aaKnown RBP eCLIP20.45■□□□□ 0.86
U2AF1-208ENST00000471250 LY6EQ16553 131 aa20.45■□□□□ 0.86
U2AF1-208ENST00000471250 DEFB112Q30KQ8 113 aa20.45■□□□□ 0.86
U2AF1-208ENST00000471250 C9orf139Q6ZV77 190 aa20.45■□□□□ 0.86
U2AF1-208ENST00000471250 CIARTQ8N365 385 aaPredicted RBP20.45■□□□□ 0.86
U2AF1-208ENST00000471250 FANCD2OSQ96PS1 177 aa20.45■□□□□ 0.86
U2AF1-208ENST00000471250 IGLV11-55A0A075B6I3 123 aa20.44■□□□□ 0.86
U2AF1-208ENST00000471250 NBPF19A0A087WUL8 3843 aa20.44■□□□□ 0.86
U2AF1-208ENST00000471250 MDFIC2A0A1B0GVS7 189 aa20.44■□□□□ 0.86
U2AF1-208ENST00000471250 SH2D7A6NKC9 451 aaPredicted RBP20.44■□□□□ 0.86
U2AF1-208ENST00000471250 ZFP92A6NM28 416 aa20.44■□□□□ 0.86
U2AF1-208ENST00000471250 C9JQL5 133 aa20.44■□□□□ 0.86
U2AF1-208ENST00000471250 K7EIM0 57 aa20.44■□□□□ 0.86
U2AF1-208ENST00000471250 ATP6V0E1O15342 81 aa20.44■□□□□ 0.86
U2AF1-208ENST00000471250 GATA2P23769 480 aaPredicted RBP20.44■□□□□ 0.86
U2AF1-208ENST00000471250 PMS2P11Q13670 270 aa20.43■□□□□ 0.86
U2AF1-208ENST00000471250 C16orf82Q7Z2V1 217 aa20.43■□□□□ 0.86
U2AF1-208ENST00000471250 TMEM68Q96MH6 324 aa20.43■□□□□ 0.86
U2AF1-208ENST00000471250 TRGV9Q99603 122 aa20.43■□□□□ 0.86
U2AF1-208ENST00000471250 HMGB3O15347 200 aaKnown RBP20.42■□□□□ 0.86
U2AF1-208ENST00000471250 SELENOTP62341 195 aa20.42■□□□□ 0.86
U2AF1-208ENST00000471250 UNQ5815/PRO19632Q6UWF5 114 aa20.42■□□□□ 0.86
U2AF1-208ENST00000471250 OR5T1Q8NG75 326 aa20.42■□□□□ 0.86
U2AF1-208ENST00000471250 OR4X1Q8NH49 305 aa20.42■□□□□ 0.86
U2AF1-208ENST00000471250 FAM110DQ8TAY7 271 aaPredicted RBP20.42■□□□□ 0.86
U2AF1-208ENST00000471250 RARRES2Q99969 163 aa20.42■□□□□ 0.86
U2AF1-208ENST00000471250 SMDT1Q9H4I9 107 aa20.42■□□□□ 0.86
U2AF1-208ENST00000471250 LINC01548A6NM66 108 aa20.42■□□□□ 0.86
U2AF1-208ENST00000471250 HAGHQ16775 308 aa20.42■□□□□ 0.86
U2AF1-208ENST00000471250 ZNF506Q5JVG8 444 aa20.42■□□□□ 0.86
U2AF1-208ENST00000471250 TNFRSF19Q9NS68 423 aa20.42■□□□□ 0.86
U2AF1-208ENST00000471250 M0QZK8 103 aa20.41■□□□□ 0.86
U2AF1-208ENST00000471250 RHOBP62745 196 aa20.41■□□□□ 0.86
U2AF1-208ENST00000471250 ZNF90Q03938 601 aa20.41■□□□□ 0.86
U2AF1-208ENST00000471250 KLK9Q2XQG4 91 aa20.41■□□□□ 0.86
U2AF1-208ENST00000471250 GNG13Q9P2W3 67 aa20.41■□□□□ 0.86
U2AF1-208ENST00000471250 KLK9Q9UKQ9 250 aa20.41■□□□□ 0.86
U2AF1-208ENST00000471250 CRIP2P52943 208 aaPredicted RBP20.4■□□□□ 0.86
U2AF1-208ENST00000471250 C19orf24Q9BVV8 132 aa20.4■□□□□ 0.86
U2AF1-208ENST00000471250 LOC102723971A0A1B0GUV8 181 aa20.39■□□□□ 0.86
U2AF1-208ENST00000471250 SMAD7O15105 426 aaKnown RBP20.39■□□□□ 0.86
U2AF1-208ENST00000471250 ADCYAP1P18509 176 aa20.39■□□□□ 0.86
U2AF1-208ENST00000471250 ICAM4Q14773 271 aa20.39■□□□□ 0.86
U2AF1-208ENST00000471250 ECSCRQ19T08 205 aa20.39■□□□□ 0.86
U2AF1-208ENST00000471250 AKIRIN2Q53H80 203 aa20.39■□□□□ 0.86
U2AF1-208ENST00000471250 C10orf91Q5T1B1 145 aa20.39■□□□□ 0.86
U2AF1-208ENST00000471250 TMUB1Q9BVT8 246 aa20.39■□□□□ 0.86
U2AF1-208ENST00000471250 THYN1Q9P016 225 aa20.39■□□□□ 0.86
U2AF1-208ENST00000471250 ABCA1O95477 2261 aa20.39■□□□□ 0.85
U2AF1-208ENST00000471250 SFTA3P0C7M3 94 aa20.38■□□□□ 0.85
U2AF1-208ENST00000471250 STAG3L2P0CL84 134 aa20.38■□□□□ 0.85
U2AF1-208ENST00000471250 STAG3L3P0CL85 134 aa20.38■□□□□ 0.85
U2AF1-208ENST00000471250 HIST1H1BP16401 226 aaKnown RBP20.38■□□□□ 0.85
U2AF1-208ENST00000471250 KHDC3LQ587J8 217 aa20.38■□□□□ 0.85
U2AF1-208ENST00000471250 SEPSECSQ9HD40 501 aaKnown RBP20.38■□□□□ 0.85
U2AF1-208ENST00000471250 PSMB11A5LHX3 300 aa20.38■□□□□ 0.85
U2AF1-208ENST00000471250 F8W036 122 aa20.38■□□□□ 0.85
U2AF1-208ENST00000471250 CLN5O75503 358 aa20.38■□□□□ 0.85
U2AF1-208ENST00000471250 IFNA1P01562 189 aa20.38■□□□□ 0.85
U2AF1-208ENST00000471250 IER3P46695 156 aa20.38■□□□□ 0.85
U2AF1-208ENST00000471250 SEC11CQ9BY50 192 aa20.38■□□□□ 0.85
U2AF1-208ENST00000471250 TMPRSS5Q9H3S3 457 aa20.38■□□□□ 0.85
U2AF1-208ENST00000471250 OR5G3P0C626 314 aa20.37■□□□□ 0.85
U2AF1-208ENST00000471250 IGLC1P0CG04 106 aa20.37■□□□□ 0.85
U2AF1-208ENST00000471250 BCL2P10415 239 aa20.37■□□□□ 0.85
U2AF1-208ENST00000471250 SPATA31B1PQ5VZV4 182 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms