RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 ABCA13Q86UQ4 5058 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.6□□□□□ -1.83
CKS1B-204ENST00000471245 ZNF728P0DKX0 622 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 IGHV1-8P0DP01 117 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 CEACAM3P40198 252 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 PSME3P61289 254 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 GNG3P63215 75 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 PAFAH1B2P68402 229 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 ST3GAL4Q11206 333 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 DYNC1I2Q13409 638 aaKnown RBP3.6□□□□□ -1.83
CKS1B-204ENST00000471245 GINS1Q14691 196 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 MAPRE2Q15555 327 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 CEACAM21Q3KPI0 293 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 MINOS1Q5TGZ0 78 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 LCN8Q6JVE9 175 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 HAGHLQ6PII5 290 aaPredicted RBP3.6□□□□□ -1.83
CKS1B-204ENST00000471245 RASSF6Q6ZTQ3 369 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 FAM19A1Q7Z5A9 133 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 ARPINQ7Z6K5 226 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 CALHM1Q8IU99 346 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 CHST4Q8NCG5 386 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 OR4P4Q8NGL7 312 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 OR13D1Q8NGV5 346 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 HOPXQ9BPY8 73 aaPredicted RBP3.6□□□□□ -1.83
CKS1B-204ENST00000471245 TSSK6Q9BXA6 273 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 RPP21Q9H633 154 aaKnown RBP3.6□□□□□ -1.83
CKS1B-204ENST00000471245 HES4Q9HCC6 221 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 RHBDL2Q9NX52 303 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 HHLA2Q9UM44 414 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 ZNF257Q9Y2Q1 563 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 AP3M1Q9Y2T2 418 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 MINOS1-NBL1R4GNA1 71 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 URGCP-MRPS24S4R325 110 aa3.6□□□□□ -1.83
CKS1B-204ENST00000471245 IGKV1-27A0A075B6S5 117 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 TRAV8-7A0A075B6U6 113 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 IGHV2-26A0A0B4J1V2 119 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 IGHV3OR16-9A0A0B4J2B5 98 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 PQLC2LA1A4F0 135 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 A6NIN4 97 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 H7C2Y5 167 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 TOR1AO14656 332 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 MAGEB4O15481 346 aaPredicted RBP3.59□□□□□ -1.83
CKS1B-204ENST00000471245 NOS1APO75052 506 aaPredicted RBP3.59□□□□□ -1.83
CKS1B-204ENST00000471245 LY6G6CO95867 125 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 GLAP06280 429 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 CFL1P23528 166 aaKnown RBP3.59□□□□□ -1.83
CKS1B-204ENST00000471245 HSD11B1P28845 292 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 NUDT2P50583 147 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 INSL3P51460 131 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 ERCC8Q13216 396 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 KIR2DS1Q14954 304 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 FAM27D1Q5T7N8 215 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 TMEM42Q69YG0 159 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 SSX6Q7RTT6 188 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 ANGPTL5Q86XS5 388 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 ZNF561Q8N587 486 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 Q8N976 141 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 C11orf72Q8NBR9 251 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 OR5A2Q8NGI9 324 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 OTOSQ8NHW6 89 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 SRSF12Q8WXF0 261 aaKnown RBP3.59□□□□□ -1.83
CKS1B-204ENST00000471245 TEAD3Q99594 435 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 CIB1Q99828 191 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 NIPSNAP1Q9BPW8 284 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 UQCC2Q9BRT2 126 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 EFCAB1Q9HAE3 211 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 GPR84Q9NQS5 396 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 CMC2Q9NRP2 79 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 FAM206AQ9NX38 181 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 LINC00527Q9UJ94 153 aa3.59□□□□□ -1.83
CKS1B-204ENST00000471245 A0A096LNJ9 63 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 LY6LH3BQJ8 138 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 H7C1H1 209 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 J3QT63 122 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 TNFRSF11BO00300 401 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 CCRL2O00421 344 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 GABARAPO95166 117 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 RBP4P02753 201 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 TTRP02766 147 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 SPNP16150 400 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 ALOX5APP20292 161 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 HTR1DP28221 377 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 BRS3P32247 399 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 MAGEA2P43356 314 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 HAAOP46952 286 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 MNAT1P51948 309 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 SMIM11AP58511 58 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 UBE2G2P60604 165 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 TSPAN5P62079 268 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 SMIM21Q3B7S5 101 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 RPL13AP3Q6NVV1 102 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 MRPL55Q7Z7F7 128 aaKnown RBP3.58□□□□□ -1.84
CKS1B-204ENST00000471245 CBR4Q8N4T8 237 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 RPP25LQ8N5L8 163 aaKnown RBP3.58□□□□□ -1.84
CKS1B-204ENST00000471245 OR52L1Q8NGH7 329 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 THEM6Q8WUY1 208 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 FAM19A4Q96LR4 140 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 TTTY10Q9BZA0 68 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 SRRQ9GZT4 340 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 CHST6Q9GZX3 395 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms