RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 ARL6Q9H0F7 186 aa2.17□□□□□ -2.06
PRPF3-204ENST00000470824 DCSTAMPQ9H295 470 aa2.17□□□□□ -2.06
PRPF3-204ENST00000470824 EFCAB1Q9HAE3 211 aa2.17□□□□□ -2.06
PRPF3-204ENST00000470824 C14orf105Q9NVL8 296 aa2.17□□□□□ -2.06
PRPF3-204ENST00000470824 RASL12Q9NYN1 266 aa2.17□□□□□ -2.06
PRPF3-204ENST00000470824 CALML5Q9NZT1 146 aa2.17□□□□□ -2.06
PRPF3-204ENST00000470824 METTL1Q9UBP6 276 aaKnown RBP2.17□□□□□ -2.06
PRPF3-204ENST00000470824 SNX12Q9UMY4 172 aa2.17□□□□□ -2.06
PRPF3-204ENST00000470824 UFC1Q9Y3C8 167 aa2.17□□□□□ -2.06
PRPF3-204ENST00000470824 TRAPPC1Q9Y5R8 145 aa2.17□□□□□ -2.06
PRPF3-204ENST00000470824 MYOFQ9NZM1 2061 aa2.17□□□□□ -2.06
PRPF3-204ENST00000470824 TPRP12270 2363 aaKnown RBP2.17□□□□□ -2.06
PRPF3-204ENST00000470824 GPR179Q6PRD1 2367 aa2.17□□□□□ -2.06
PRPF3-204ENST00000470824 ASCC3Q8N3C0 2202 aaKnown RBP2.17□□□□□ -2.06
PRPF3-204ENST00000470824 PI4KAP42356 2102 aa2.17□□□□□ -2.06
PRPF3-204ENST00000470824 DSPP15924 2871 aaKnown RBP2.16□□□□□ -2.06
PRPF3-204ENST00000470824 ATMQ13315 3056 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 A0A1B0GX12 115 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 IGSF23A1L1A6 192 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 PRORSD1PA6NEY8 169 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 SMIM9A6NGZ8 99 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 OR5H14A6NHG9 310 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 FAM183AA6NL82 134 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 CLDN25C9JDP6 229 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 FTCDNL1E5RQL4 147 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 F6UZH7 168 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 ISLRO14498 428 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 SLC31A1O15431 190 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 GPR75O95800 540 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 CA2P00918 260 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 IFNA1P01562 189 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 IFNA7P01567 189 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 HLA-AP01891 365 aaKnown RBP2.16□□□□□ -2.06
PRPF3-204ENST00000470824 C1QCP02747 245 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 CST2P09228 141 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 RNASE2P10153 161 aaKnown RBP2.16□□□□□ -2.06
PRPF3-204ENST00000470824 HIST1H1BP16401 226 aaKnown RBP2.16□□□□□ -2.06
PRPF3-204ENST00000470824 HIST1H1CP16403 213 aaKnown RBP2.16□□□□□ -2.06
PRPF3-204ENST00000470824 UGT2B7P16662 529 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 PVALBP20472 110 aaPredicted RBP2.16□□□□□ -2.06
PRPF3-204ENST00000470824 EVX1P49640 407 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 PIGPP57054 158 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 TCTAP57738 103 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 TBPL1P62380 186 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 GNG3P63215 75 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 SURF2Q15527 256 aaPredicted RBP2.16□□□□□ -2.06
PRPF3-204ENST00000470824 PLPPR5Q32ZL2 321 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 SPIN4Q56A73 249 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 OR10J3Q5JRS4 329 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 CLLU1Q5K131 121 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 FAM78BQ5VT40 261 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 HAGHLQ6PII5 290 aaPredicted RBP2.16□□□□□ -2.06
PRPF3-204ENST00000470824 TMPPEQ6ZT21 453 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 NIT1Q86X76 327 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 BAP18Q8IXM2 172 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 SMIM20Q8N5G0 67 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 DEFB119Q8N690 84 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 PACRGLQ8N7B6 248 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 ST6GALNAC3Q8NDV1 305 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 OR2M3Q8NG83 312 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 OR4E2Q8NGC2 313 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 OR4P4Q8NGL7 312 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 OR4C13Q8NGP0 309 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 OR13C4Q8NGS5 318 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 ZNF721Q8TF20 911 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 RAB8BQ92930 207 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 FXYD5Q96DB9 178 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 MRAP2Q96G30 205 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 BTF3L4Q96K17 158 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 PGLYRP3Q96LB9 341 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 CNBD2Q96M20 576 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 TBX5Q99593 518 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 SHANK2-AS3Q9BTD1 123 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 CDCA4Q9BXL8 241 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 UGT2B28Q9BY64 529 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 PLA2G12AQ9BZM1 189 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 CHST5Q9GZS9 411 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 TXNIPQ9H3M7 391 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 CACYBPQ9HB71 228 aaKnown RBP2.16□□□□□ -2.06
PRPF3-204ENST00000470824 ASH1LQ9NR48 2969 aaKnown RBP2.16□□□□□ -2.06
PRPF3-204ENST00000470824 SPANXB1Q9NS25 103 aaPredicted RBP2.16□□□□□ -2.06
PRPF3-204ENST00000470824 MED9Q9NWA0 146 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 ZNF230Q9UIE0 474 aaPredicted RBP2.16□□□□□ -2.06
PRPF3-204ENST00000470824 CCL26Q9Y258 94 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 SLC35A3Q9Y2D2 325 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 ZFP30Q9Y2G7 519 aa2.16□□□□□ -2.06
PRPF3-204ENST00000470824 COL27A1Q8IZC6 1860 aaPredicted RBP2.16□□□□□ -2.06
PRPF3-204ENST00000470824 TENM4Q6N022 2769 aa2.15□□□□□ -2.06
PRPF3-204ENST00000470824 SETXQ7Z333 2677 aaKnown RBP2.15□□□□□ -2.06
PRPF3-204ENST00000470824 IGF2RP11717 2491 aa2.15□□□□□ -2.06
PRPF3-204ENST00000470824 IGHV3-21A0A0B4J1V1 117 aa2.15□□□□□ -2.07
PRPF3-204ENST00000470824 IGHV2-26A0A0B4J1V2 119 aa2.15□□□□□ -2.07
PRPF3-204ENST00000470824 TRAV8-2A0A0B4J237 113 aa2.15□□□□□ -2.07
PRPF3-204ENST00000470824 J3QKU1 62 aa2.15□□□□□ -2.07
PRPF3-204ENST00000470824 ORC5O43913 435 aa2.15□□□□□ -2.07
PRPF3-204ENST00000470824 SNAPC5O75971 98 aa2.15□□□□□ -2.07
PRPF3-204ENST00000470824 RAB36O95755 333 aa2.15□□□□□ -2.07
PRPF3-204ENST00000470824 TYMSP04818 313 aa2.15□□□□□ -2.07
PRPF3-204ENST00000470824 C8orf88P0DMB2 117 aa2.15□□□□□ -2.07
PRPF3-204ENST00000470824 HIST1H1EP10412 219 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms