RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 MT-CO2P00403 227 aa11.87□□□□□ -0.51
COL4A5-203ENST00000470339 SULT1A2P50226 295 aa11.87□□□□□ -0.51
COL4A5-203ENST00000470339 RPL15P61313 204 aaKnown RBP11.87□□□□□ -0.51
COL4A5-203ENST00000470339 RUNX1Q01196 453 aa11.87□□□□□ -0.51
COL4A5-203ENST00000470339 ECSCRQ19T08 205 aa11.87□□□□□ -0.51
COL4A5-203ENST00000470339 C19orf35Q6ZS72 473 aa11.87□□□□□ -0.51
COL4A5-203ENST00000470339 THAP8Q8NA92 274 aa11.87□□□□□ -0.51
COL4A5-203ENST00000470339 ZNF418Q8TF45 676 aaPredicted RBP11.87□□□□□ -0.51
COL4A5-203ENST00000470339 NPCDR1Q9BY65 106 aa11.87□□□□□ -0.51
COL4A5-203ENST00000470339 SH3BGRL3Q9H299 93 aa11.87□□□□□ -0.51
COL4A5-203ENST00000470339 TNFRSF19Q9NS68 423 aa11.87□□□□□ -0.51
COL4A5-203ENST00000470339 DNAJC9-AS1A6NH13 148 aa11.86□□□□□ -0.51
COL4A5-203ENST00000470339 G3V318 75 aa11.86□□□□□ -0.51
COL4A5-203ENST00000470339 K7EIM0 57 aa11.86□□□□□ -0.51
COL4A5-203ENST00000470339 FAM157CP0CG43 387 aa11.86□□□□□ -0.51
COL4A5-203ENST00000470339 CLLU1Q5K131 121 aa11.86□□□□□ -0.51
COL4A5-203ENST00000470339 Q6ZS46 218 aa11.86□□□□□ -0.51
COL4A5-203ENST00000470339 Q8N2B8 174 aa11.86□□□□□ -0.51
COL4A5-203ENST00000470339 OR4X1Q8NH49 305 aa11.86□□□□□ -0.51
COL4A5-203ENST00000470339 OR2T6Q8NHC8 308 aa11.86□□□□□ -0.51
COL4A5-203ENST00000470339 VN1R17PQ8TDU5 208 aa11.86□□□□□ -0.51
COL4A5-203ENST00000470339 SAT2Q96F10 170 aaPredicted RBP11.86□□□□□ -0.51
COL4A5-203ENST00000470339 RSG1Q9BU20 258 aa11.86□□□□□ -0.51
COL4A5-203ENST00000470339 AGPAT2O15120 278 aa11.85□□□□□ -0.51
COL4A5-203ENST00000470339 MBP02144 154 aa11.85□□□□□ -0.51
COL4A5-203ENST00000470339 PPIFP30405 207 aaKnown RBP11.85□□□□□ -0.51
COL4A5-203ENST00000470339 RPL29P47914 159 aaKnown RBP11.85□□□□□ -0.51
COL4A5-203ENST00000470339 CAMLGP49069 296 aa11.85□□□□□ -0.51
COL4A5-203ENST00000470339 DPPA3Q6W0C5 159 aa11.85□□□□□ -0.51
COL4A5-203ENST00000470339 NECAP1Q8NC96 275 aa11.85□□□□□ -0.51
COL4A5-203ENST00000470339 NPIPB3Q92617 1050 aa11.85□□□□□ -0.51
COL4A5-203ENST00000470339 ACY3Q96HD9 319 aa11.85□□□□□ -0.51
COL4A5-203ENST00000470339 JMJD8Q96S16 334 aa11.85□□□□□ -0.51
COL4A5-203ENST00000470339 MGST2Q99735 147 aa11.85□□□□□ -0.51
COL4A5-203ENST00000470339 TXN2Q99757 166 aa11.85□□□□□ -0.51
COL4A5-203ENST00000470339 IGKV1OR2-108A0A075B7D4 117 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 TMEM89A2RUT3 159 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 PRH1P02810 166 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 FCGR2BP31994 310 aaPredicted RBP11.84□□□□□ -0.51
COL4A5-203ENST00000470339 RND2P52198 227 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 SELENOTP62341 195 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 CFHR3Q02985 330 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 FAM74A1Q5RGS3 127 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 CXorf58Q96LI9 332 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 ATP6V0BQ99437 205 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 TRGV9Q99603 122 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 GGTLC1Q9BX51 225 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 ZNF702PQ9H963 129 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 PLA2G2EQ9NZK7 142 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 FBXL7Q9UJT9 491 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 SLC45A2Q9UMX9 530 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 MTORP42345 2549 aa11.84□□□□□ -0.51
COL4A5-203ENST00000470339 NSD1Q96L73 2696 aaPredicted RBP11.83□□□□□ -0.52
COL4A5-203ENST00000470339 TRAV30A0A087WSZ9 112 aa11.83□□□□□ -0.52
COL4A5-203ENST00000470339 FAM223BA6NKX1 122 aa11.83□□□□□ -0.52
COL4A5-203ENST00000470339 NDUFB8O95169 186 aa11.83□□□□□ -0.52
COL4A5-203ENST00000470339 IGLV1-40P01703 118 aa11.83□□□□□ -0.52
COL4A5-203ENST00000470339 RNASE1P07998 156 aaKnown RBP11.83□□□□□ -0.52
COL4A5-203ENST00000470339 NMBP08949 121 aa11.83□□□□□ -0.52
COL4A5-203ENST00000470339 NPBWR1P48145 328 aa11.83□□□□□ -0.52
COL4A5-203ENST00000470339 MFAP4P55083 255 aa11.83□□□□□ -0.52
COL4A5-203ENST00000470339 HILS1P60008 231 aa11.83□□□□□ -0.52
COL4A5-203ENST00000470339 BLOC1S1P78537 153 aa11.83□□□□□ -0.52
COL4A5-203ENST00000470339 AKR1C8PQ5T2L2 129 aa11.83□□□□□ -0.52
COL4A5-203ENST00000470339 ACSM6Q6P461 480 aa11.83□□□□□ -0.52
COL4A5-203ENST00000470339 TMEM182Q6ZP80 229 aaPredicted RBP11.83□□□□□ -0.52
COL4A5-203ENST00000470339 FAM223AQ8IWN6 122 aa11.83□□□□□ -0.52
COL4A5-203ENST00000470339 ESM1Q9NQ30 184 aa11.83□□□□□ -0.52
COL4A5-203ENST00000470339 MRPL36Q9P0J6 103 aaKnown RBP11.83□□□□□ -0.52
COL4A5-203ENST00000470339 RFNGQ9Y644 331 aa11.83□□□□□ -0.52
COL4A5-203ENST00000470339 ANK3Q12955 4377 aaKnown RBP11.83□□□□□ -0.52
COL4A5-203ENST00000470339 TCRBV4S1A1TA0A5B7 111 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 CLN5O75503 358 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 OR2J3O76001 311 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 TSPAN15O95858 294 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 OR10J1P30954 320 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 RHOGP84095 191 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 PRR20EP86478 221 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 PRR20CP86479 221 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 PRR20DP86480 221 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 PRR20BP86481 221 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 PRR20AP86496 221 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 CYP2G1PQ6ZSU1 146 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 USMG5Q96IX5 58 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 NOL4LQ96MY1 436 aaPredicted RBP11.82□□□□□ -0.52
COL4A5-203ENST00000470339 GSX1Q9H4S2 264 aaPredicted RBP11.82□□□□□ -0.52
COL4A5-203ENST00000470339 ZNF355PQ9NSJ1 428 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 GAR1Q9NY12 217 aaKnown RBP11.82□□□□□ -0.52
COL4A5-203ENST00000470339 C21orf62Q9NYP8 219 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 LINC00527Q9UJ94 153 aa11.82□□□□□ -0.52
COL4A5-203ENST00000470339 IGKV1D-37A0A075B6S9 117 aa11.81□□□□□ -0.52
COL4A5-203ENST00000470339 ZFP92A6NM28 416 aa11.81□□□□□ -0.52
COL4A5-203ENST00000470339 ZNF705EA8MWA4 302 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-203ENST00000470339 INAFM1C9JVW0 142 aa11.81□□□□□ -0.52
COL4A5-203ENST00000470339 IGHV3-48P01763 117 aa11.81□□□□□ -0.52
COL4A5-203ENST00000470339 IGHG4P01861 327 aa11.81□□□□□ -0.52
COL4A5-203ENST00000470339 FABP1P07148 127 aa11.81□□□□□ -0.52
COL4A5-203ENST00000470339 LINC00869P0C866 280 aa11.81□□□□□ -0.52
COL4A5-203ENST00000470339 NDUFA5Q16718 116 aa11.81□□□□□ -0.52
COL4A5-203ENST00000470339 ACOT6Q3I5F7 207 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms