RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 UTF1Q5T230 341 aa6.46□□□□□ -1.38
SMC4-212ENST00000470240 SPATA31B1PQ5VZV4 182 aa6.46□□□□□ -1.38
SMC4-212ENST00000470240 LYPD2Q6UXB3 125 aa6.46□□□□□ -1.38
SMC4-212ENST00000470240 S100A7AQ86SG5 101 aa6.46□□□□□ -1.38
SMC4-212ENST00000470240 MOB3BQ86TA1 216 aa6.46□□□□□ -1.38
SMC4-212ENST00000470240 MUC15Q8N387 334 aa6.46□□□□□ -1.38
SMC4-212ENST00000470240 OR5AU1Q8NGC0 362 aa6.46□□□□□ -1.38
SMC4-212ENST00000470240 OCC1Q8TAD7 63 aa6.46□□□□□ -1.38
SMC4-212ENST00000470240 RPEQ96AT9 228 aa6.46□□□□□ -1.38
SMC4-212ENST00000470240 RNF5Q99942 180 aa6.46□□□□□ -1.38
SMC4-212ENST00000470240 SRSF8Q9BRL6 282 aaKnown RBP6.46□□□□□ -1.38
SMC4-212ENST00000470240 SLC25A33Q9BSK2 321 aa6.46□□□□□ -1.38
SMC4-212ENST00000470240 PAXXQ9BUH6 204 aa6.46□□□□□ -1.38
SMC4-212ENST00000470240 SCNM1Q9BWG6 230 aa6.46□□□□□ -1.38
SMC4-212ENST00000470240 RAB1BQ9H0U4 201 aa6.46□□□□□ -1.38
SMC4-212ENST00000470240 INSIG2Q9Y5U4 225 aa6.46□□□□□ -1.38
SMC4-212ENST00000470240 IGHV2-26A0A0B4J1V2 119 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 IFITM10A6NMD0 228 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 FAM90A27PA6NNH2 459 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 LINC00587B1AMM8 73 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 ISLRO14498 428 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 TNFRSF13BO14836 293 aaPredicted RBP6.45□□□□□ -1.38
SMC4-212ENST00000470240 FOXH1O75593 365 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 IGHV2-70P01814 119 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 MGST1P10620 155 aaKnown RBP6.45□□□□□ -1.38
SMC4-212ENST00000470240 CRYBB3P26998 211 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 CA7P43166 264 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 DLX6P56179 175 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 TPPP2P59282 170 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 KLRB1Q12918 225 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 JOSD1Q15040 202 aaPredicted RBP6.45□□□□□ -1.38
SMC4-212ENST00000470240 PRSS8Q16651 343 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 FBXL19-AS1Q494R0 122 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 GFI1BQ5VTD9 330 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 ZCCHC24Q8N2G6 241 aaKnown RBP6.45□□□□□ -1.38
SMC4-212ENST00000470240 THAP8Q8NA92 274 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 ZNF114Q8NC26 417 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 ST6GALNAC3Q8NDV1 305 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 BEND2Q8NDZ0 799 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 OR10W1Q8NGF6 305 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 OR1L6Q8NGR2 347 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 NPIPB3Q92617 1050 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 ST6GALNAC6Q969X2 333 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 TRGV9Q99603 122 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 OSTCQ9NRP0 149 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 AP5S1Q9NUS5 200 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 AURKAIP1Q9NWT8 199 aaPredicted RBP6.45□□□□□ -1.38
SMC4-212ENST00000470240 ZNRD1Q9P1U0 126 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 CTSZQ9UBR2 303 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 MSRB2Q9Y3D2 182 aa6.45□□□□□ -1.38
SMC4-212ENST00000470240 CADP27708 2225 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 TRBV20OR9-2A0A075B6H5 130 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 TRAV20A0A0B4J274 112 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 PPIAL4CA0A0B4J2A2 164 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 PGPEP1LA6NFU8 196 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 CCL21O00585 134 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 FCN1O00602 326 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 IGLV2-23P01705 113 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 AMBPP02760 352 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 LIPFP07098 398 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 PPIAL4GP0DN37 164 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 YPEL3P61236 119 aaPredicted RBP6.44□□□□□ -1.38
SMC4-212ENST00000470240 RPL15P61313 204 aaKnown RBP6.44□□□□□ -1.38
SMC4-212ENST00000470240 UBE2G1P62253 170 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 SUMO1P63165 101 aaKnown RBP6.44□□□□□ -1.38
SMC4-212ENST00000470240 PAFAH1B2P68402 229 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 ZNF672Q499Z4 452 aaPredicted RBP6.44□□□□□ -1.38
SMC4-212ENST00000470240 ANKRD39Q53RE8 183 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 PRR30Q53SZ7 412 aaPredicted RBP6.44□□□□□ -1.38
SMC4-212ENST00000470240 CMTM2Q8TAZ6 248 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 FAM122AQ96E09 287 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 SMIM12Q96EX1 92 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 C1orf159Q96HA4 380 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 NOL4LQ96MY1 436 aaPredicted RBP6.44□□□□□ -1.38
SMC4-212ENST00000470240 TNFRSF19Q9NS68 423 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 ZNF355PQ9NSJ1 428 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 SERTAD4Q9NUC0 356 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 CDC42EP3Q9UKI2 254 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 RNF24Q9Y225 148 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 CUL9Q8IWT3 2517 aa6.44□□□□□ -1.38
SMC4-212ENST00000470240 ZGRF1Q86YA3 2104 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 IGHV1-3A0A0C4DH29 117 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 A0A1W2PPI3 338 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 ZNF705GA8MUZ8 300 aaPredicted RBP6.43□□□□□ -1.38
SMC4-212ENST00000470240 SNURFLB1AK76 121 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 NPIPB6E9PJ23 425 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 BUB1B-PAK6H3BSN5 160 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 PEX7O00628 323 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 HYPMO75409 117 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 HLA-DQA1P01909 254 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 CRISP2P16562 243 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 S100A7P31151 101 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 LGALS4P56470 323 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 PAX2Q02962 417 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 WT1-ASQ06250 92 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 USF2Q15853 346 aaPredicted RBP6.43□□□□□ -1.38
SMC4-212ENST00000470240 IBA57Q5T440 356 aaKnown RBP6.43□□□□□ -1.38
SMC4-212ENST00000470240 RASL11AQ6T310 242 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 BAGE3Q86Y29 109 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 BAGE2Q86Y30 109 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms