RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 HIST1H2BDP58876 126 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 HIST1H2BCP62807 126 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 PDGFRLQ15198 375 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 HIST2H2BEQ16778 126 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 VMA21Q3ZAQ7 101 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.61□□□□□ -1.99
COL11A1-208ENST00000470170 BCL2L15Q5TBC7 163 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 TMEM244Q5VVB8 128 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 C1orf140Q5VVS0 124 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 AMMECR1LQ6DCA0 310 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 LCA10Q71F78 164 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 FER1L6-AS1Q8NA97 138 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 OR10G2Q8NGC3 310 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 OR4K5Q8NGD3 323 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 HIST1H2BHQ93079 126 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 HIST1H2BNQ99877 126 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 HIST1H2BMQ99879 126 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 C1QTNF6Q9BXI9 259 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 SPANXDQ9BXN6 97 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 FGF23Q9GZV9 251 aaPredicted RBP2.61□□□□□ -1.99
COL11A1-208ENST00000470170 RERGLQ9H628 205 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 CA10Q9NS85 328 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 SCN3BQ9NY72 215 aa2.61□□□□□ -1.99
COL11A1-208ENST00000470170 MRPS16Q9Y3D3 137 aaKnown RBP2.61□□□□□ -1.99
COL11A1-208ENST00000470170 NALCNQ8IZF0 1738 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 IGHV3OR15-7A0A075B7D8 119 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 IGHV3-72A0A0B4J1Y9 119 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 IGHV7-4-1A0A0J9YVY3 117 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 GGT3PA6NGU5 568 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 BBIP1A8MTZ0 92 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 GGTLC3B5MD39 225 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 C9JCJ5 164 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 J3QQQ9 107 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 TAX1BP3O14907 124 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 PLA2G10O15496 165 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 RBFOX2O43251 390 aaKnown RBP eCLIP2.6□□□□□ -1.99
COL11A1-208ENST00000470170 IGLV2-23P01705 113 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 IGLC6P0CF74 106 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 LINC00694P0DN24 101 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 LGALS3P17931 250 aaKnown RBP2.6□□□□□ -1.99
COL11A1-208ENST00000470170 EIF2B2P49770 351 aaKnown RBP2.6□□□□□ -1.99
COL11A1-208ENST00000470170 GNG4P50150 75 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 CCL20P78556 96 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 FAM78AQ5JUQ0 283 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 MORN3Q6PF18 240 aaPredicted RBP2.6□□□□□ -1.99
COL11A1-208ENST00000470170 LHFPL1Q86WI0 220 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 GPHB5Q86YW7 130 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 KRTAP13-1Q8IUC0 172 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 MSRB3Q8IXL7 192 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 C10orf126Q8N4M7 172 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 OR2T10Q8NGZ9 312 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 SFT2D1Q8WV19 159 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 H1FXQ92522 213 aaKnown RBP2.6□□□□□ -1.99
COL11A1-208ENST00000470170 HIST1H2BAQ96A08 127 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 CHCHD7Q9BUK0 85 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 CHAC1Q9BUX1 264 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 ZNF286AQ9HBT8 521 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 NAV1Q8NEY1 1877 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 LRP5O75197 1615 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 SMARCA4P51532 1647 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 THSD7AQ9UPZ6 1657 aa2.6□□□□□ -1.99
COL11A1-208ENST00000470170 SIGLEC1Q9BZZ2 1709 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 DOCK3Q8IZD9 2030 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 NEO1Q92859 1461 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 IGLV11-55A0A075B6I3 123 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 TRAV30A0A087WSZ9 112 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 IGHV3-49A0A0A0MS15 119 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 TRAV41A0A0B4J266 112 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 TMEM212A6NML5 194 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 I3L521 148 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 NPFFO15130 113 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 MT-ND4LP03901 98 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 PRM2P04554 102 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 AKAIN1P0CW23 69 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 IGHV1-8P0DP01 117 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 CSRP1P21291 193 aaKnown RBP2.59□□□□□ -1.99
COL11A1-208ENST00000470170 SRP14P37108 136 aaKnown RBP2.59□□□□□ -1.99
COL11A1-208ENST00000470170 CRISP3P54108 245 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 FGF12P61328 243 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 EIF5AP63241 154 aaKnown RBP2.59□□□□□ -1.99
COL11A1-208ENST00000470170 ZNF181Q2M3W8 571 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 GLIPR1L1Q6UWM5 242 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 TMEM14EPQ6UXP3 125 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 GTF2H5Q6ZYL4 71 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 TMEM256Q8N2U0 113 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 CYB561D1Q8N8Q1 229 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 OR4K13Q8NH42 304 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 OR4A5Q8NH83 315 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 PP6455Q8WZ26 134 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 PEBP4Q96S96 227 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 MGLLQ99685 303 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 OTORQ9NRC9 128 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 CCDC167Q9P0B6 97 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 LRP4O75096 1905 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 WDR97A6NE52 1622 aa2.59□□□□□ -1.99
COL11A1-208ENST00000470170 DYSFO75923 2080 aa2.59□□□□□ -2
COL11A1-208ENST00000470170 FANCD2Q9BXW9 1451 aa2.58□□□□□ -2
COL11A1-208ENST00000470170 CACNA1SQ13698 1873 aa2.58□□□□□ -2
COL11A1-208ENST00000470170 ARAP3Q8WWN8 1544 aa2.58□□□□□ -2
COL11A1-208ENST00000470170 IGHV5-51A0A0C4DH38 117 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms