RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 NDUFB6O95139 128 aa12.24□□□□□ -0.45
GTF3C2-209ENST00000470115 ANXA3P12429 323 aa12.24□□□□□ -0.45
GTF3C2-209ENST00000470115 VAMP1P23763 118 aa12.24□□□□□ -0.45
GTF3C2-209ENST00000470115 FCGR2BP31994 310 aaPredicted RBP12.24□□□□□ -0.45
GTF3C2-209ENST00000470115 BTCP35070 178 aa12.24□□□□□ -0.45
GTF3C2-209ENST00000470115 ZFAND6Q6FIF0 208 aa12.24□□□□□ -0.45
GTF3C2-209ENST00000470115 LAMTOR1Q6IAA8 161 aa12.24□□□□□ -0.45
GTF3C2-209ENST00000470115 GLYATL2Q8WU03 294 aa12.24□□□□□ -0.45
GTF3C2-209ENST00000470115 STARD9Q9P2P6 4700 aa12.24□□□□□ -0.45
GTF3C2-209ENST00000470115 C15orf62A8K5M9 175 aa12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 TSPAN4O14817 238 aa12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 YIF1AO95070 293 aa12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 CDS2O95674 445 aa12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 DEFA1P59665 94 aa12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 DEFA3P59666 94 aa12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 RELQ04864 619 aaPredicted RBP12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 ASAH1Q13510 395 aa12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 Q6ZRM9 215 aa12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 ENKURQ8TC29 256 aa12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 TMEM230Q96A57 120 aa12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 SPAG8Q99932 426 aaPredicted RBP12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 PDCD10Q9BUL8 212 aa12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 SMPXQ9UHP9 88 aa12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 TBC1D24Q9ULP9 559 aa12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 FLVCR2Q9UPI3 526 aa12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 TENM2Q9NT68 2774 aa12.23□□□□□ -0.45
GTF3C2-209ENST00000470115 INS-IGF2F8WCM5 200 aa12.22□□□□□ -0.45
GTF3C2-209ENST00000470115 GNG7O60262 68 aa12.22□□□□□ -0.45
GTF3C2-209ENST00000470115 HOXA1P49639 335 aaPredicted RBP12.22□□□□□ -0.45
GTF3C2-209ENST00000470115 IFITM3Q01628 133 aa12.22□□□□□ -0.45
GTF3C2-209ENST00000470115 DHODHQ02127 395 aa12.22□□□□□ -0.45
GTF3C2-209ENST00000470115 TMEM128Q5BJH2 165 aa12.22□□□□□ -0.45
GTF3C2-209ENST00000470115 LHFPL5Q8TAF8 219 aa12.22□□□□□ -0.45
GTF3C2-209ENST00000470115 C20orf85Q9H1P6 137 aa12.22□□□□□ -0.45
GTF3C2-209ENST00000470115 PRR13Q9NZ81 148 aa12.22□□□□□ -0.45
GTF3C2-209ENST00000470115 UBQLN2Q9UHD9 624 aa12.22□□□□□ -0.45
GTF3C2-209ENST00000470115 TRAV6A0A075B6T7 132 aa12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 IGHV3-49A0A0A0MS15 119 aa12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 IGHV7-4-1A0A0J9YVY3 117 aa12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 TCRBP04435 133 aa12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 RNASE2P10153 161 aaKnown RBP12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 NPBWR1P48145 328 aa12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 TMEM268Q5VZI3 342 aa12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 FAM219AQ8IW50 185 aa12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 SELENOHQ8IZQ5 122 aaKnown RBP12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 TMEM116Q8NCL8 245 aa12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 DUSP18Q8NEJ0 188 aa12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 RBPMSQ93062 196 aaKnown RBP12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 RHPN1-AS1Q9BWJ2 59 aa12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 GGTLC1Q9BX51 225 aa12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 ENY2Q9NPA8 101 aa12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.21□□□□□ -0.45
GTF3C2-209ENST00000470115 LOC102724200A0A096LPH7 203 aaPredicted RBP12.2□□□□□ -0.46
GTF3C2-209ENST00000470115 ANXA7P20073 488 aaKnown RBP12.2□□□□□ -0.46
GTF3C2-209ENST00000470115 SUB1P53999 127 aaKnown RBP eCLIP12.2□□□□□ -0.46
GTF3C2-209ENST00000470115 PPP1R1AQ13522 171 aa12.2□□□□□ -0.46
GTF3C2-209ENST00000470115 C4orf46Q504U0 113 aa12.2□□□□□ -0.46
GTF3C2-209ENST00000470115 PVRIGQ6DKI7 326 aa12.2□□□□□ -0.46
GTF3C2-209ENST00000470115 OR10C1Q96KK4 312 aa12.2□□□□□ -0.46
GTF3C2-209ENST00000470115 RNF2Q99496 336 aa12.2□□□□□ -0.46
GTF3C2-209ENST00000470115 NUDT15Q9NV35 164 aa12.2□□□□□ -0.46
GTF3C2-209ENST00000470115 SACSQ9NZJ4 4579 aa12.2□□□□□ -0.46
GTF3C2-209ENST00000470115 IGHV3OR16-13A0A075B7E8 117 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 TRAV14DV4A0A0A6YYC5 116 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 IGHV3-74A0A0B4J1X5 117 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 OR4C46A6NHA9 309 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 CHEK1O14757 476 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 TMEM50AO95807 157 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 SPCS3P61009 180 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 SUPT4H1P63272 117 aaKnown RBP12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 TMEM187Q14656 261 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 MLANAQ16655 118 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 AARDQ4LEZ3 155 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 TOMM20LQ6UXN7 152 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 GPR146Q96CH1 333 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 GALNT14Q96FL9 552 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 CACNG5Q9UF02 275 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 RYR2Q92736 4967 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 LYSTQ99698 3801 aa12.19□□□□□ -0.46
GTF3C2-209ENST00000470115 H2AFB2P0C5Z0 115 aa12.18□□□□□ -0.46
GTF3C2-209ENST00000470115 UBE2MP61081 183 aaKnown RBP12.18□□□□□ -0.46
GTF3C2-209ENST00000470115 SRPXP78539 464 aa12.18□□□□□ -0.46
GTF3C2-209ENST00000470115 ODF3L2Q3SX64 289 aa12.18□□□□□ -0.46
GTF3C2-209ENST00000470115 LGI3Q8N145 548 aa12.18□□□□□ -0.46
GTF3C2-209ENST00000470115 OR52E5Q8NH55 327 aa12.18□□□□□ -0.46
GTF3C2-209ENST00000470115 FNDC4Q9H6D8 234 aaPredicted RBP12.18□□□□□ -0.46
GTF3C2-209ENST00000470115 MRPL36Q9P0J6 103 aaKnown RBP12.18□□□□□ -0.46
GTF3C2-209ENST00000470115 TMEM56-RWDD3S4R434 201 aa12.18□□□□□ -0.46
GTF3C2-209ENST00000470115 CORTO00230 105 aa12.17□□□□□ -0.46
GTF3C2-209ENST00000470115 SFT2D2O95562 160 aa12.17□□□□□ -0.46
GTF3C2-209ENST00000470115 OR4E1P0C645 316 aa12.17□□□□□ -0.46
GTF3C2-209ENST00000470115 BSXQ3C1V8 233 aa12.17□□□□□ -0.46
GTF3C2-209ENST00000470115 ZNF600Q6ZNG1 722 aa12.17□□□□□ -0.46
GTF3C2-209ENST00000470115 NRARPQ7Z6K4 114 aa12.17□□□□□ -0.46
GTF3C2-209ENST00000470115 OVOL2Q9BRP0 275 aa12.17□□□□□ -0.46
GTF3C2-209ENST00000470115 GINS3Q9BRX5 216 aa12.17□□□□□ -0.46
GTF3C2-209ENST00000470115 HEYLQ9NQ87 328 aaPredicted RBP12.17□□□□□ -0.46
GTF3C2-209ENST00000470115 PUS1Q9Y606 427 aaKnown RBP eCLIP12.17□□□□□ -0.46
GTF3C2-209ENST00000470115 IGKV3-7A0A075B6H7 116 aa12.16□□□□□ -0.46
GTF3C2-209ENST00000470115 C9orf170A2RU37 121 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms