RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 IFNA7P01567 189 aa10.62□□□□□ -0.71
LINC00173-201ENST00000470091 HLA-DRB1P01911 266 aa10.62□□□□□ -0.71
LINC00173-201ENST00000470091 IFNA4P05014 189 aa10.62□□□□□ -0.71
LINC00173-201ENST00000470091 EIF5AP63241 154 aaKnown RBP10.62□□□□□ -0.71
LINC00173-201ENST00000470091 BSXQ3C1V8 233 aa10.62□□□□□ -0.71
LINC00173-201ENST00000470091 C19orf35Q6ZS72 473 aa10.62□□□□□ -0.71
LINC00173-201ENST00000470091 BAP18Q8IXM2 172 aa10.62□□□□□ -0.71
LINC00173-201ENST00000470091 C5orf56Q8N8D9 126 aa10.62□□□□□ -0.71
LINC00173-201ENST00000470091 UBAC2Q8NBM4 344 aa10.62□□□□□ -0.71
LINC00173-201ENST00000470091 OR10P1Q8NGE3 313 aa10.62□□□□□ -0.71
LINC00173-201ENST00000470091 ARPC1AQ92747 370 aa10.62□□□□□ -0.71
LINC00173-201ENST00000470091 NOL4LQ96MY1 436 aaPredicted RBP10.62□□□□□ -0.71
LINC00173-201ENST00000470091 RASL11BQ9BPW5 248 aa10.62□□□□□ -0.71
LINC00173-201ENST00000470091 FAM103A1Q9BTL3 118 aaKnown RBP10.62□□□□□ -0.71
LINC00173-201ENST00000470091 TMEM147Q9BVK8 224 aa10.62□□□□□ -0.71
LINC00173-201ENST00000470091 UBQLN2Q9UHD9 624 aa10.62□□□□□ -0.71
LINC00173-201ENST00000470091 IGHV7-81A0A0B4J1V7 117 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 PRSS46E5RG02 174 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 M0QZK8 103 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 SCAF4O95104 1147 aaKnown RBP10.61□□□□□ -0.71
LINC00173-201ENST00000470091 SNCAP37840 140 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 CX3CL1P78423 397 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 ZNF266Q14584 549 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 C2orf83Q53S99 150 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 FAM74A1Q5RGS3 127 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 C18orf65Q6ZTR6 163 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 MRPL41Q8IXM3 137 aaKnown RBP10.61□□□□□ -0.71
LINC00173-201ENST00000470091 LINC00482Q8N8I6 264 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 HSD17B11Q8NBQ5 300 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 SCARB1Q8WTV0 552 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 TMED6Q8WW62 240 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 PINX1Q96BK5 328 aaKnown RBP10.61□□□□□ -0.71
LINC00173-201ENST00000470091 P2RX4Q99571 388 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 HSPB9Q9BQS6 159 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 ARV1Q9H2C2 271 aa10.61□□□□□ -0.71
LINC00173-201ENST00000470091 NUDT19A8MXV4 375 aa10.6□□□□□ -0.71
LINC00173-201ENST00000470091 IFNA5P01569 189 aa10.6□□□□□ -0.71
LINC00173-201ENST00000470091 RUNX1Q01196 453 aa10.6□□□□□ -0.71
LINC00173-201ENST00000470091 SLC25A24Q6NUK1 477 aa10.6□□□□□ -0.71
LINC00173-201ENST00000470091 ZNF562Q6V9R5 426 aa10.6□□□□□ -0.71
LINC00173-201ENST00000470091 GINS3Q9BRX5 216 aa10.6□□□□□ -0.71
LINC00173-201ENST00000470091 SH3BGRL3Q9H299 93 aa10.6□□□□□ -0.71
LINC00173-201ENST00000470091 UQCC1Q9NVA1 299 aa10.6□□□□□ -0.71
LINC00173-201ENST00000470091 FBXO7Q9Y3I1 522 aa10.6□□□□□ -0.71
LINC00173-201ENST00000470091 SMCO3A2RU48 225 aa10.59□□□□□ -0.71
LINC00173-201ENST00000470091 FGF16O43320 207 aa10.59□□□□□ -0.71
LINC00173-201ENST00000470091 ATP5IP56385 69 aaPredicted RBP10.59□□□□□ -0.71
LINC00173-201ENST00000470091 DLK1P80370 383 aa10.59□□□□□ -0.71
LINC00173-201ENST00000470091 ATP6V1FQ16864 119 aa10.59□□□□□ -0.71
LINC00173-201ENST00000470091 C8orf86Q6ZUL3 223 aa10.59□□□□□ -0.71
LINC00173-201ENST00000470091 ZNF114Q8NC26 417 aa10.59□□□□□ -0.71
LINC00173-201ENST00000470091 PCNPQ8WW12 178 aaKnown RBP10.59□□□□□ -0.71
LINC00173-201ENST00000470091 DPF1Q92782 380 aa10.59□□□□□ -0.71
LINC00173-201ENST00000470091 PHYHIPLQ96FC7 376 aa10.59□□□□□ -0.71
LINC00173-201ENST00000470091 DUX3Q96PT4 197 aa10.59□□□□□ -0.71
LINC00173-201ENST00000470091 SRSF8Q9BRL6 282 aaKnown RBP10.59□□□□□ -0.71
LINC00173-201ENST00000470091 PARP11Q9NR21 331 aa10.59□□□□□ -0.71
LINC00173-201ENST00000470091 RFNGQ9Y644 331 aa10.59□□□□□ -0.71
LINC00173-201ENST00000470091 TNCP24821 2201 aa10.58□□□□□ -0.72
LINC00173-201ENST00000470091 LINC01548A6NM66 108 aa10.58□□□□□ -0.72
LINC00173-201ENST00000470091 EGR2P11161 476 aaPredicted RBP10.58□□□□□ -0.72
LINC00173-201ENST00000470091 FGF7P21781 194 aa10.58□□□□□ -0.72
LINC00173-201ENST00000470091 ATP6V0CP27449 155 aa10.58□□□□□ -0.72
LINC00173-201ENST00000470091 SUB1P53999 127 aaKnown RBP eCLIP10.58□□□□□ -0.72
LINC00173-201ENST00000470091 MFAP2P55001 183 aa10.58□□□□□ -0.72
LINC00173-201ENST00000470091 CD69Q07108 199 aa10.58□□□□□ -0.72
LINC00173-201ENST00000470091 VWC2Q2TAL6 325 aa10.58□□□□□ -0.72
LINC00173-201ENST00000470091 ASPHD1Q5U4P2 390 aa10.58□□□□□ -0.72
LINC00173-201ENST00000470091 HSD17B13Q7Z5P4 300 aaPredicted RBP10.58□□□□□ -0.72
LINC00173-201ENST00000470091 SCGB1C1Q8TD33 95 aa10.58□□□□□ -0.72
LINC00173-201ENST00000470091 WDR61Q9GZS3 305 aaKnown RBP10.58□□□□□ -0.72
LINC00173-201ENST00000470091 SLC25A32Q9H2D1 315 aa10.58□□□□□ -0.72
LINC00173-201ENST00000470091 F11RQ9Y624 299 aaKnown RBP10.58□□□□□ -0.72
LINC00173-201ENST00000470091 ATP6V0E1O15342 81 aa10.57□□□□□ -0.72
LINC00173-201ENST00000470091 EGFEM1PQ0D2K5 195 aa10.57□□□□□ -0.72
LINC00173-201ENST00000470091 SLC16A13Q7RTY0 426 aa10.57□□□□□ -0.72
LINC00173-201ENST00000470091 SLC35E3Q7Z769 313 aa10.57□□□□□ -0.72
LINC00173-201ENST00000470091 KLHL30-AS1Q8NEE0 82 aa10.57□□□□□ -0.72
LINC00173-201ENST00000470091 MISP3Q96FF7 219 aa10.57□□□□□ -0.72
LINC00173-201ENST00000470091 RSG1Q9BU20 258 aa10.57□□□□□ -0.72
LINC00173-201ENST00000470091 GGACTQ9BVM4 153 aa10.57□□□□□ -0.72
LINC00173-201ENST00000470091 PARD6GQ9BYG4 376 aaPredicted RBP10.57□□□□□ -0.72
LINC00173-201ENST00000470091 PLA2G2EQ9NZK7 142 aa10.57□□□□□ -0.72
LINC00173-201ENST00000470091 DMRT1Q9Y5R6 373 aa10.57□□□□□ -0.72
LINC00173-201ENST00000470091 RYR3Q15413 4870 aa10.57□□□□□ -0.72
LINC00173-201ENST00000470091 RPS10-NUDT3A0A1W2PQS6 291 aa10.56□□□□□ -0.72
LINC00173-201ENST00000470091 SPP1P10451 314 aa10.56□□□□□ -0.72
LINC00173-201ENST00000470091 CTRB1P17538 263 aa10.56□□□□□ -0.72
LINC00173-201ENST00000470091 AKR1C1Q04828 323 aa10.56□□□□□ -0.72
LINC00173-201ENST00000470091 ECSCRQ19T08 205 aa10.56□□□□□ -0.72
LINC00173-201ENST00000470091 PVRIGQ6DKI7 326 aa10.56□□□□□ -0.72
LINC00173-201ENST00000470091 CTRB2Q6GPI1 263 aa10.56□□□□□ -0.72
LINC00173-201ENST00000470091 EIF5AL1Q6IS14 154 aaKnown RBP10.56□□□□□ -0.72
LINC00173-201ENST00000470091 TMEM182Q6ZP80 229 aaPredicted RBP10.56□□□□□ -0.72
LINC00173-201ENST00000470091 LCNL1Q6ZST4 164 aa10.56□□□□□ -0.72
LINC00173-201ENST00000470091 OR1P1Q8NH06 330 aa10.56□□□□□ -0.72
LINC00173-201ENST00000470091 RNASEH2CQ8TDP1 164 aaKnown RBP10.56□□□□□ -0.72
LINC00173-201ENST00000470091 GPR61Q9BZJ8 451 aa10.56□□□□□ -0.72
LINC00173-201ENST00000470091 WDR83OSQ9Y284 106 aa10.56□□□□□ -0.72
LINC00173-201ENST00000470091 NPIPB5A8MRT5 1133 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms