RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 PRSS48Q7RTY5 328 aa13.48□□□□□ -0.25
NCKIPSD-209ENST00000470006 H2BFWTQ7Z2G1 175 aa13.48□□□□□ -0.25
NCKIPSD-209ENST00000470006 CADM3Q8N126 398 aa13.48□□□□□ -0.25
NCKIPSD-209ENST00000470006 C6orf223Q8N319 242 aa13.48□□□□□ -0.25
NCKIPSD-209ENST00000470006 EHFQ9NZC4 300 aa13.48□□□□□ -0.25
NCKIPSD-209ENST00000470006 TEX48A0A1B0GUV7 120 aa13.47□□□□□ -0.25
NCKIPSD-209ENST00000470006 MEIS3P1A6NDR6 274 aa13.47□□□□□ -0.25
NCKIPSD-209ENST00000470006 CRYBB3P26998 211 aa13.47□□□□□ -0.25
NCKIPSD-209ENST00000470006 SNRPD3P62318 126 aaKnown RBP13.47□□□□□ -0.25
NCKIPSD-209ENST00000470006 PRCDQ00LT1 54 aa13.47□□□□□ -0.25
NCKIPSD-209ENST00000470006 SPINK9Q5DT21 86 aa13.47□□□□□ -0.25
NCKIPSD-209ENST00000470006 ZNF2Q9BSG1 426 aaPredicted RBP13.47□□□□□ -0.25
NCKIPSD-209ENST00000470006 YTHDF1Q9BYJ9 559 aaKnown RBP13.47□□□□□ -0.25
NCKIPSD-209ENST00000470006 NDUFB11Q9NX14 153 aa13.47□□□□□ -0.25
NCKIPSD-209ENST00000470006 DKK2Q9UBU2 259 aa13.47□□□□□ -0.25
NCKIPSD-209ENST00000470006 RRP15Q9Y3B9 282 aaKnown RBP13.47□□□□□ -0.25
NCKIPSD-209ENST00000470006 RFNGQ9Y644 331 aa13.47□□□□□ -0.25
NCKIPSD-209ENST00000470006 SMIM9A6NGZ8 99 aa13.46□□□□□ -0.25
NCKIPSD-209ENST00000470006 SCGB2A1O75556 95 aa13.46□□□□□ -0.25
NCKIPSD-209ENST00000470006 FXYD7P58549 80 aa13.46□□□□□ -0.25
NCKIPSD-209ENST00000470006 SPATA12Q7Z6I5 190 aa13.46□□□□□ -0.25
NCKIPSD-209ENST00000470006 NEU1Q99519 415 aa13.46□□□□□ -0.25
NCKIPSD-209ENST00000470006 IFT46Q9NQC8 304 aa13.46□□□□□ -0.25
NCKIPSD-209ENST00000470006 H3BMM0 161 aa13.45□□□□□ -0.26
NCKIPSD-209ENST00000470006 IGKV3-20P01619 116 aa13.45□□□□□ -0.26
NCKIPSD-209ENST00000470006 AP2S1P53680 142 aaPredicted RBP13.45□□□□□ -0.26
NCKIPSD-209ENST00000470006 FAM3BP58499 235 aaPredicted RBP13.45□□□□□ -0.26
NCKIPSD-209ENST00000470006 HSPE1P61604 102 aaKnown RBP13.45□□□□□ -0.26
NCKIPSD-209ENST00000470006 ZNF705AQ6ZN79 300 aaPredicted RBP13.45□□□□□ -0.26
NCKIPSD-209ENST00000470006 NBDYA0A0U1RRE5 68 aa13.44□□□□□ -0.26
NCKIPSD-209ENST00000470006 GPR31O00270 319 aa13.44□□□□□ -0.26
NCKIPSD-209ENST00000470006 CBX5P45973 191 aa13.44□□□□□ -0.26
NCKIPSD-209ENST00000470006 RFX2P48378 723 aa13.44□□□□□ -0.26
NCKIPSD-209ENST00000470006 DNAH5Q8TE73 4624 aa13.43□□□□□ -0.26
NCKIPSD-209ENST00000470006 S100GP29377 79 aa13.43□□□□□ -0.26
NCKIPSD-209ENST00000470006 PHLDA2Q53GA4 152 aa13.43□□□□□ -0.26
NCKIPSD-209ENST00000470006 SFXN4Q6P4A7 337 aa13.43□□□□□ -0.26
NCKIPSD-209ENST00000470006 GSG1LQ6UXU4 331 aa13.43□□□□□ -0.26
NCKIPSD-209ENST00000470006 AUNIPQ9H7T9 357 aa13.43□□□□□ -0.26
NCKIPSD-209ENST00000470006 DIABLOQ9NR28 239 aa13.43□□□□□ -0.26
NCKIPSD-209ENST00000470006 ZNF705FA8MVS1 300 aaPredicted RBP13.42□□□□□ -0.26
NCKIPSD-209ENST00000470006 FAM90A26D6RGX4 464 aa13.42□□□□□ -0.26
NCKIPSD-209ENST00000470006 CLN5O75503 358 aa13.42□□□□□ -0.26
NCKIPSD-209ENST00000470006 PMP2P02689 132 aa13.42□□□□□ -0.26
NCKIPSD-209ENST00000470006 ZNF705DP0CH99 300 aaPredicted RBP13.42□□□□□ -0.26
NCKIPSD-209ENST00000470006 ZNF705BP0CI00 300 aaPredicted RBP13.42□□□□□ -0.26
NCKIPSD-209ENST00000470006 OPRK1P41145 380 aa13.42□□□□□ -0.26
NCKIPSD-209ENST00000470006 SUB1P53999 127 aaKnown RBP eCLIP13.42□□□□□ -0.26
NCKIPSD-209ENST00000470006 DAD1P61803 113 aa13.42□□□□□ -0.26
NCKIPSD-209ENST00000470006 TBCEQ15813 527 aaPredicted RBP13.42□□□□□ -0.26
NCKIPSD-209ENST00000470006 DHRS11Q6UWP2 260 aa13.42□□□□□ -0.26
NCKIPSD-209ENST00000470006 SLC35G3Q8N808 338 aa13.42□□□□□ -0.26
NCKIPSD-209ENST00000470006 C15orf53Q8NAA6 179 aa13.42□□□□□ -0.26
NCKIPSD-209ENST00000470006 SEC22AQ96IW7 307 aa13.42□□□□□ -0.26
NCKIPSD-209ENST00000470006 EPM2AB3EWF7 344 aa13.41□□□□□ -0.26
NCKIPSD-209ENST00000470006 CORTO00230 105 aa13.41□□□□□ -0.26
NCKIPSD-209ENST00000470006 TIGITQ495A1 244 aa13.41□□□□□ -0.26
NCKIPSD-209ENST00000470006 C16orf54Q6UWD8 224 aa13.41□□□□□ -0.26
NCKIPSD-209ENST00000470006 OR5H6Q8NGV6 325 aa13.41□□□□□ -0.26
NCKIPSD-209ENST00000470006 C7orf50Q9BRJ6 194 aaKnown RBP13.41□□□□□ -0.26
NCKIPSD-209ENST00000470006 HNRNPCP07910 306 aaKnown RBP eCLIP13.4□□□□□ -0.26
NCKIPSD-209ENST00000470006 HLA-DRB4P13762 266 aa13.4□□□□□ -0.26
NCKIPSD-209ENST00000470006 OXA1LQ15070 435 aa13.4□□□□□ -0.26
NCKIPSD-209ENST00000470006 MLANAQ16655 118 aa13.4□□□□□ -0.26
NCKIPSD-209ENST00000470006 OR5H2Q8NGV7 314 aa13.4□□□□□ -0.26
NCKIPSD-209ENST00000470006 MRGPRFQ96AM1 343 aa13.4□□□□□ -0.26
NCKIPSD-209ENST00000470006 TXNL4BQ9NX01 149 aaKnown RBP13.4□□□□□ -0.26
NCKIPSD-209ENST00000470006 MRPL36Q9P0J6 103 aaKnown RBP13.4□□□□□ -0.26
NCKIPSD-209ENST00000470006 YTHDF2Q9Y5A9 579 aaKnown RBP13.4□□□□□ -0.26
NCKIPSD-209ENST00000470006 HLA-DRB4X5D2U9 266 aa13.4□□□□□ -0.26
NCKIPSD-209ENST00000470006 A0A0A6YYH2 397 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 LOC102723971A0A1B0GUV8 181 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 A6NJ64 397 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 HBE1P02100 147 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 INAFM2P0DMQ5 153 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 MXD1Q05195 221 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 IDNKQ5T6J7 187 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 TBC1D26Q86UD7 250 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 OR6F1Q8NGZ6 308 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 OR4X1Q8NH49 305 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 GLMPQ8WWB7 406 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 SLC25A38Q96DW6 304 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 PDCD10Q9BUL8 212 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 FXYD6Q9H0Q3 95 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 ENY2Q9NPA8 101 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 NRN1Q9NPD7 142 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 GOLT1BQ9Y3E0 138 aa13.39□□□□□ -0.27
NCKIPSD-209ENST00000470006 RPS10-NUDT3A0A1W2PQS6 291 aa13.38□□□□□ -0.27
NCKIPSD-209ENST00000470006 NUDT3O95989 172 aa13.38□□□□□ -0.27
NCKIPSD-209ENST00000470006 HOXA1P49639 335 aaPredicted RBP13.38□□□□□ -0.27
NCKIPSD-209ENST00000470006 IZUMO4Q1ZYL8 232 aa13.38□□□□□ -0.27
NCKIPSD-209ENST00000470006 OR4B1Q8NGF8 309 aa13.38□□□□□ -0.27
NCKIPSD-209ENST00000470006 Q8WTZ3 238 aa13.38□□□□□ -0.27
NCKIPSD-209ENST00000470006 LINC00052Q96N35 136 aa13.38□□□□□ -0.27
NCKIPSD-209ENST00000470006 U3KQE9 123 aa13.38□□□□□ -0.27
NCKIPSD-209ENST00000470006 TRAV30A0A087WSZ9 112 aa13.37□□□□□ -0.27
NCKIPSD-209ENST00000470006 IGKV1-39P01597 117 aa13.37□□□□□ -0.27
NCKIPSD-209ENST00000470006 IGKV1D-39P04432 117 aa13.37□□□□□ -0.27
NCKIPSD-209ENST00000470006 AQP4P55087 323 aa13.37□□□□□ -0.27
NCKIPSD-209ENST00000470006 TAS2R46P59540 309 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms