RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 HECTD4Q9Y4D8 3996 aa6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 A0A0J9YWU9 116 aa6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 LCE6AA0A183 80 aa6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 TSPAN4O14817 238 aa6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 DEFB4AO15263 64 aa6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 CDS2O95674 445 aa6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 IGKV1-17P01599 117 aa6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 S100GP29377 79 aa6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 TMEM187Q14656 261 aa6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 DEFB135Q30KP9 77 aa6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 LEMD1Q68G75 181 aa6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 TMEM116Q8NCL8 245 aa6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 TMEM56Q96MV1 263 aa6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 TMEM222Q9H0R3 208 aa6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 FAM212BQ9NTI7 297 aaPredicted RBP6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 CACNG5Q9UF02 275 aa6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 PUS1Q9Y606 427 aaKnown RBP eCLIP6.79□□□□□ -1.32
SHROOM3-203ENST00000469923 LOC102724200A0A096LPH7 203 aaPredicted RBP6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 CRYM-AS1A6NIL9 109 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 K7EMT4 169 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 FGF2P09038 288 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 GIG44P09565 113 aaPredicted RBP6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 AKR1C4P17516 323 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 S100A5P33763 92 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 ELLP55199 621 aaPredicted RBP6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 KLF9Q13886 244 aaPredicted RBP6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 BAK1Q16611 211 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 BSXQ3C1V8 233 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 ANKRD55Q3KP44 614 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 TMEM268Q5VZI3 342 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 STPG3Q8N7X2 389 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 TRIM63Q969Q1 353 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 OR10C1Q96KK4 312 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 GGTLC1Q9BX51 225 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 PALMDQ9NP74 551 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 DAZ1Q9NQZ3 744 aaKnown RBP6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 MCUBQ9NWR8 336 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 FKBP11Q9NYL4 201 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 THYN1Q9P016 225 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 RABL2AQ9UBK7 228 aaPredicted RBP6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 RABL2BQ9UNT1 228 aa6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 C14orf166Q9Y224 244 aaKnown RBP6.78□□□□□ -1.32
SHROOM3-203ENST00000469923 TRAV14DV4A0A0A6YYC5 116 aa6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 TRAV25A0A0B4J276 109 aa6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 KNCNA6PVL3 124 aa6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 PRB4P10163 310 aaPredicted RBP6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 AKR1C2P52895 323 aa6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 ERHP84090 104 aaKnown RBP6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 PMS2P11Q13670 270 aa6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 PRSS54Q6PEW0 395 aa6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 SPSB3Q6PJ21 355 aa6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 TCF24Q7RTU0 167 aa6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 SLC16A13Q7RTY0 426 aa6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 TOMM5Q8N4H5 51 aa6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 CCDC71LQ8N9Z2 235 aa6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 ZNF114Q8NC26 417 aa6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 MARC2Q969Z3 335 aa6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 SDHCQ99643 169 aaPredicted RBP6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 SRRQ9GZT4 340 aa6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 MS4A6AQ9H2W1 248 aa6.77□□□□□ -1.33
SHROOM3-203ENST00000469923 LINC00854A0A1B0GVQ3 168 aa6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 C15orf62A8K5M9 175 aa6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 GNG7O60262 68 aa6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 SNCAP37840 140 aa6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 HOXA1P49639 335 aaPredicted RBP6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 THOC7Q6I9Y2 204 aaKnown RBP6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 HSD17B13Q7Z5P4 300 aaPredicted RBP6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 SLC35G3Q8N808 338 aa6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 NPIPB3Q92617 1050 aa6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 PRRT1Q99946 306 aa6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 RBKSQ9H477 322 aa6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 VSIRQ9H7M9 311 aa6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 MAP6D1Q9H9H5 199 aa6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 SCP2D1Q9UJQ7 156 aa6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 FLVCR2Q9UPI3 526 aa6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 TMEM56-RWDD3S4R434 201 aa6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 DNAH11Q96DT5 4516 aa6.76□□□□□ -1.33
SHROOM3-203ENST00000469923 DYNC1H1Q14204 4646 aaKnown RBP6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 SPRY2O43597 315 aa6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 CLN5O75503 358 aa6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 DEFB131AP59861 70 aa6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 SPCS3P61009 180 aa6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 DHODHQ02127 395 aa6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 SURF2Q15527 256 aaPredicted RBP6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 AARDQ4LEZ3 155 aa6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 NMSQ5H8A3 153 aa6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 TMEM182Q6ZP80 229 aaPredicted RBP6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 LYG2Q86SG7 212 aa6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 DUSP18Q8NEJ0 188 aa6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 IL17DQ8TAD2 202 aa6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 RNF183Q96D59 192 aa6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 TXN2Q99757 166 aa6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 SPAG8Q99932 426 aaPredicted RBP6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 MAGT1Q9H0U3 335 aa6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 HEYLQ9NQ87 328 aaPredicted RBP6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.75□□□□□ -1.33
SHROOM3-203ENST00000469923 IGKV1D-37A0A075B6S9 117 aa6.74□□□□□ -1.33
SHROOM3-203ENST00000469923 CEBPZOSA8MTT3 80 aa6.74□□□□□ -1.33
SHROOM3-203ENST00000469923 MPTX1A8MV57 137 aa6.74□□□□□ -1.33
SHROOM3-203ENST00000469923 INS-IGF2F8WCM5 200 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms