RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 SUCNR1Q9BXA5 334 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 TTTY10Q9BZA0 68 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 OR2H1Q9GZK4 316 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 TXNIPQ9H3M7 391 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 GID8Q9NWU2 228 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 ENOPH1Q9UHY7 261 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 NAGKQ9UJ70 344 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 POLR1DQ9Y2S0 133 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 NACAE9PAV3 2078 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 CSPG4Q6UVK1 2322 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 DNHD1Q96M86 4753 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 IGHV3OR15-7A0A075B7D8 119 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 IGKV1-6A0A0C4DH72 117 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 IGHV1-69-2A0A0G2JMI3 117 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 F5H5K5 113 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 F5H5P2 479 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 H3BSH0 61 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 RER1O15258 196 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 OR2A4O95047 310 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 SOX14O95416 240 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 IFNA14P01570 189 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 IGKV1-39P01597 117 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 IGKV1D-39P04432 117 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 GYPBP06028 91 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 SLC2A1P11166 492 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 PSKH1P11801 424 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 SPNP16150 400 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 CTLA4P16410 223 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 KLF3P57682 345 aaPredicted RBP2.45□□□□□ -2.02
GPNMB-207ENST00000468723 TAS2R43P59537 309 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 ACTG1P63261 375 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 TNFAIP6P98066 277 aaPredicted RBP2.45□□□□□ -2.02
GPNMB-207ENST00000468723 MEF2CQ06413 473 aaPredicted RBP2.45□□□□□ -2.02
GPNMB-207ENST00000468723 KRR1Q13601 381 aaKnown RBP2.45□□□□□ -2.02
GPNMB-207ENST00000468723 ENDOGQ14249 297 aaKnown RBP2.45□□□□□ -2.02
GPNMB-207ENST00000468723 KRTAP21-3Q3LHN1 58 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 ZNF404Q494X3 552 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 Q499Y3 187 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 Q6P435 159 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 C5orf46Q6UWT4 87 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 ZFP2Q6ZN57 461 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 PDPNQ86YL7 162 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 ORMDL3Q8N138 153 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 SIGLECL1Q8N7X8 197 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 Q8N9L7 120 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 OR8J3Q8NGG0 315 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 OR9Q1Q8NGQ5 310 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 KLF14Q8TD94 323 aaPredicted RBP2.45□□□□□ -2.02
GPNMB-207ENST00000468723 SRSF12Q8WXF0 261 aaKnown RBP2.45□□□□□ -2.02
GPNMB-207ENST00000468723 OR2A7Q96R45 310 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 NMNAT3Q96T66 252 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 LINC01587Q99440 93 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 MARVELD1Q9BSK0 173 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 FBXL15Q9H469 300 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 PLEKHJ1Q9NW61 149 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 C21orf62Q9NYP8 219 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 COMMD9Q9P000 198 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 DOCK11Q5JSL3 2073 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 TACC2O95359 2948 aa2.45□□□□□ -2.02
GPNMB-207ENST00000468723 SONP18583 2426 aaKnown RBP2.44□□□□□ -2.02
GPNMB-207ENST00000468723 SETD2Q9BYW2 2564 aaPredicted RBP2.44□□□□□ -2.02
GPNMB-207ENST00000468723 TRAV8-2A0A0B4J237 113 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 LOC102725191A0A1B0GVB3 256 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 PGPA6NDG6 321 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 BBIP1A8MTZ0 92 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 CLDN25C9JDP6 229 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 TRAPPC2LH3BP13 241 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 TCF21O43680 179 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 SYNGR1O43759 233 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 COX7A2P2O60397 106 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 NDUFB2O95178 105 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 GADD45GO95257 159 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 CST2P09228 141 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 TSPAN19P0C672 248 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 SEC11BP0C7V7 166 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 COX5BP10606 129 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 HIST1H1CP16403 213 aaKnown RBP2.44□□□□□ -2.02
GPNMB-207ENST00000468723 PMELP40967 661 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 GUCA1AP43080 201 aaPredicted RBP2.44□□□□□ -2.02
GPNMB-207ENST00000468723 OMPP47874 163 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 FXYD6P3P58550 94 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 SSX1Q16384 188 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 HIST3H3Q16695 136 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 UBE2NLQ5JXB2 153 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 C10orf128Q5T292 105 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 FAM27BQ5VT28 67 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 ZNF773Q6PK81 442 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 BRD3OSQ6XYD6 125 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 ZNF826PQ6ZT77 177 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 LINC00596Q86U02 117 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 DEFB107AQ8IZN7 70 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 OR5L1Q8NGL2 311 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 RASSF5Q8WWW0 418 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 SLC35B4Q969S0 331 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 SLC25A46Q96AG3 418 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 FXYD5Q96DB9 178 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 YIPF6Q96EC8 236 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 DERL3Q96Q80 235 aa2.44□□□□□ -2.02
GPNMB-207ENST00000468723 OR2V2Q96R30 315 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms