RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 FHITP49789 147 aa11.31□□□□□ -0.6
COL27A1-203ENST00000468565 IZUMO4Q1ZYL8 232 aa11.31□□□□□ -0.6
COL27A1-203ENST00000468565 C18orf65Q6ZTR6 163 aa11.31□□□□□ -0.6
COL27A1-203ENST00000468565 C8orf86Q6ZUL3 223 aa11.31□□□□□ -0.6
COL27A1-203ENST00000468565 REC114Q7Z4M0 266 aa11.31□□□□□ -0.6
COL27A1-203ENST00000468565 LINC00482Q8N8I6 264 aa11.31□□□□□ -0.6
COL27A1-203ENST00000468565 EIF5A2Q9GZV4 153 aaKnown RBP11.31□□□□□ -0.6
COL27A1-203ENST00000468565 PSENENQ9NZ42 101 aa11.31□□□□□ -0.6
COL27A1-203ENST00000468565 DNAH3Q8TD57 4116 aa11.31□□□□□ -0.6
COL27A1-203ENST00000468565 ATP6V0E1O15342 81 aa11.31□□□□□ -0.6
COL27A1-203ENST00000468565 RPLP1P05386 114 aaKnown RBP11.31□□□□□ -0.6
COL27A1-203ENST00000468565 MYCNOSP40205 109 aa11.31□□□□□ -0.6
COL27A1-203ENST00000468565 AKR1C8PQ5T2L2 129 aa11.31□□□□□ -0.6
COL27A1-203ENST00000468565 SLC25A24Q6NUK1 477 aa11.31□□□□□ -0.6
COL27A1-203ENST00000468565 DPPA3Q6W0C5 159 aa11.31□□□□□ -0.6
COL27A1-203ENST00000468565 PDPNQ86YL7 162 aa11.31□□□□□ -0.6
COL27A1-203ENST00000468565 ZNF383Q8NA42 475 aa11.31□□□□□ -0.6
COL27A1-203ENST00000468565 A0A1B0GW64 132 aa11.3□□□□□ -0.6
COL27A1-203ENST00000468565 C9JQL5 133 aa11.3□□□□□ -0.6
COL27A1-203ENST00000468565 APOA2P02652 100 aa11.3□□□□□ -0.6
COL27A1-203ENST00000468565 IGLL1P15814 213 aa11.3□□□□□ -0.6
COL27A1-203ENST00000468565 PSMB8P28062 276 aa11.3□□□□□ -0.6
COL27A1-203ENST00000468565 PPIFP30405 207 aaKnown RBP11.3□□□□□ -0.6
COL27A1-203ENST00000468565 CDX1P47902 265 aaPredicted RBP11.3□□□□□ -0.6
COL27A1-203ENST00000468565 NPBWR1P48145 328 aa11.3□□□□□ -0.6
COL27A1-203ENST00000468565 PPT1P50897 306 aa11.3□□□□□ -0.6
COL27A1-203ENST00000468565 HBG1P69891 147 aa11.3□□□□□ -0.6
COL27A1-203ENST00000468565 HBG2P69892 147 aa11.3□□□□□ -0.6
COL27A1-203ENST00000468565 TMEM267Q0VDI3 215 aaPredicted RBP11.3□□□□□ -0.6
COL27A1-203ENST00000468565 EIF4EBP1Q13541 118 aaPredicted RBP11.3□□□□□ -0.6
COL27A1-203ENST00000468565 ZNF66Q6ZN08 573 aa11.3□□□□□ -0.6
COL27A1-203ENST00000468565 MRPL41Q8IXM3 137 aaKnown RBP11.3□□□□□ -0.6
COL27A1-203ENST00000468565 SCGB1C1Q8TD33 95 aa11.3□□□□□ -0.6
COL27A1-203ENST00000468565 TCTEX1D2Q8WW35 142 aa11.3□□□□□ -0.6
COL27A1-203ENST00000468565 FBXL15Q9H469 300 aa11.3□□□□□ -0.6
COL27A1-203ENST00000468565 H3BP45 60 aa11.29□□□□□ -0.6
COL27A1-203ENST00000468565 M0R1X1 148 aa11.29□□□□□ -0.6
COL27A1-203ENST00000468565 IAPPP10997 89 aa11.29□□□□□ -0.6
COL27A1-203ENST00000468565 CRIP2P52943 208 aaPredicted RBP11.29□□□□□ -0.6
COL27A1-203ENST00000468565 RAB2AP61019 212 aa11.29□□□□□ -0.6
COL27A1-203ENST00000468565 MYOZ3Q8TDC0 251 aa11.29□□□□□ -0.6
COL27A1-203ENST00000468565 P2RX4Q99571 388 aa11.29□□□□□ -0.6
COL27A1-203ENST00000468565 HSD17B10Q99714 261 aaKnown RBP11.29□□□□□ -0.6
COL27A1-203ENST00000468565 SMDT1Q9H4I9 107 aa11.29□□□□□ -0.6
COL27A1-203ENST00000468565 TRAV41A0A0B4J266 112 aa11.29□□□□□ -0.6
COL27A1-203ENST00000468565 PLGLAQ15195 96 aa11.29□□□□□ -0.6
COL27A1-203ENST00000468565 TMEM88Q6PEY1 159 aa11.29□□□□□ -0.6
COL27A1-203ENST00000468565 SCRT1Q9BWW7 348 aa11.29□□□□□ -0.6
COL27A1-203ENST00000468565 LINC00587B1AMM8 73 aa11.28□□□□□ -0.6
COL27A1-203ENST00000468565 IGLV1-40P01703 118 aa11.28□□□□□ -0.6
COL27A1-203ENST00000468565 HBE1P02100 147 aa11.28□□□□□ -0.6
COL27A1-203ENST00000468565 IGKV1-16P04430 117 aa11.28□□□□□ -0.6
COL27A1-203ENST00000468565 LINC00205P59089 165 aa11.28□□□□□ -0.6
COL27A1-203ENST00000468565 RPL30P62888 115 aaKnown RBP11.28□□□□□ -0.6
COL27A1-203ENST00000468565 NDPQ00604 133 aa11.28□□□□□ -0.6
COL27A1-203ENST00000468565 PSG5Q15238 335 aa11.28□□□□□ -0.6
COL27A1-203ENST00000468565 LCNL1Q6ZST4 164 aa11.28□□□□□ -0.6
COL27A1-203ENST00000468565 FLYWCH2Q96CP2 140 aaKnown RBP11.28□□□□□ -0.6
COL27A1-203ENST00000468565 C5orf30Q96GV9 206 aa11.28□□□□□ -0.6
COL27A1-203ENST00000468565 GPR61Q9BZJ8 451 aa11.28□□□□□ -0.6
COL27A1-203ENST00000468565 OR51M1Q9H341 326 aa11.28□□□□□ -0.6
COL27A1-203ENST00000468565 SLC35D1Q9NTN3 355 aa11.28□□□□□ -0.6
COL27A1-203ENST00000468565 METTL1Q9UBP6 276 aaKnown RBP11.28□□□□□ -0.6
COL27A1-203ENST00000468565 G3V318 75 aa11.27□□□□□ -0.6
COL27A1-203ENST00000468565 METTL15P1P0C7V9 234 aa11.27□□□□□ -0.6
COL27A1-203ENST00000468565 UBE2KP61086 200 aa11.27□□□□□ -0.6
COL27A1-203ENST00000468565 RPS16P62249 146 aaKnown RBP11.27□□□□□ -0.6
COL27A1-203ENST00000468565 CX3CL1P78423 397 aa11.27□□□□□ -0.6
COL27A1-203ENST00000468565 RUNX1Q01196 453 aa11.27□□□□□ -0.6
COL27A1-203ENST00000468565 TNFRSF9Q07011 255 aa11.27□□□□□ -0.6
COL27A1-203ENST00000468565 C19orf54Q5BKX5 351 aa11.27□□□□□ -0.6
COL27A1-203ENST00000468565 OR2B11Q5JQS5 317 aa11.27□□□□□ -0.6
COL27A1-203ENST00000468565 CBLN2Q8IUK8 224 aa11.27□□□□□ -0.6
COL27A1-203ENST00000468565 C4orf3Q8WVX3 66 aa11.27□□□□□ -0.6
COL27A1-203ENST00000468565 RAX2Q96IS3 184 aa11.27□□□□□ -0.6
COL27A1-203ENST00000468565 MCRIP2Q9BUT9 160 aaKnown RBP11.27□□□□□ -0.6
COL27A1-203ENST00000468565 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.27□□□□□ -0.6
COL27A1-203ENST00000468565 CCL24O00175 119 aa11.27□□□□□ -0.61
COL27A1-203ENST00000468565 RAMP3O60896 148 aa11.27□□□□□ -0.61
COL27A1-203ENST00000468565 S1PR2O95136 353 aa11.27□□□□□ -0.61
COL27A1-203ENST00000468565 KRASP01116 189 aa11.27□□□□□ -0.61
COL27A1-203ENST00000468565 P0C879 139 aa11.27□□□□□ -0.61
COL27A1-203ENST00000468565 G6PCP35575 357 aa11.27□□□□□ -0.61
COL27A1-203ENST00000468565 CD300LFQ8TDQ1 290 aa11.27□□□□□ -0.61
COL27A1-203ENST00000468565 ADTRPQ96IZ2 230 aa11.27□□□□□ -0.61
COL27A1-203ENST00000468565 SLC35B3Q9H1N7 401 aa11.27□□□□□ -0.61
COL27A1-203ENST00000468565 RBKSQ9H477 322 aa11.27□□□□□ -0.61
COL27A1-203ENST00000468565 HSPB7Q9UBY9 170 aa11.27□□□□□ -0.61
COL27A1-203ENST00000468565 FBXO7Q9Y3I1 522 aa11.27□□□□□ -0.61
COL27A1-203ENST00000468565 RFNGQ9Y644 331 aa11.27□□□□□ -0.61
COL27A1-203ENST00000468565 TGP01266 2768 aa11.27□□□□□ -0.61
COL27A1-203ENST00000468565 A0A1B0GV50 99 aa11.26□□□□□ -0.61
COL27A1-203ENST00000468565 OR8U8P0C7N1 319 aa11.26□□□□□ -0.61
COL27A1-203ENST00000468565 LGALS7P47929 136 aa11.26□□□□□ -0.61
COL27A1-203ENST00000468565 SPANXN5Q5MJ07 72 aa11.26□□□□□ -0.61
COL27A1-203ENST00000468565 ZNF562Q6V9R5 426 aa11.26□□□□□ -0.61
COL27A1-203ENST00000468565 H2BFWTQ7Z2G1 175 aa11.26□□□□□ -0.61
COL27A1-203ENST00000468565 SFT2D1Q8WV19 159 aa11.26□□□□□ -0.61
COL27A1-203ENST00000468565 UBE2E2Q96LR5 201 aa11.26□□□□□ -0.61
COL27A1-203ENST00000468565 PSMG3Q9BT73 122 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms