RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 LINC01548A6NM66 108 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 NUDT19A8MXV4 375 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 ATP6V0E1O15342 81 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 YIF1AO95070 293 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 M6PRP20645 277 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 OR10J1P30954 320 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 RND2P52198 227 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 CCL20P78556 96 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 TOR2AQ5JU69 321 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 ETFRF1Q6IPR1 90 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 STPG3Q8N7X2 389 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 NPIPB5A8MRT5 1133 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 B2MP61769 119 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 LCN15Q6UWW0 184 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 TTC9CQ8N5M4 171 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 SLC25A22Q9H936 323 aa16.23■□□□□ 0.19
TMEM53-207ENST00000468117 GATA2P23769 480 aaPredicted RBP16.22■□□□□ 0.19
TMEM53-207ENST00000468117 RPL29P47914 159 aaKnown RBP16.22■□□□□ 0.19
TMEM53-207ENST00000468117 ACOT6Q3I5F7 207 aaPredicted RBP16.22■□□□□ 0.19
TMEM53-207ENST00000468117 FAM122CQ6P4D5 195 aa16.22■□□□□ 0.19
TMEM53-207ENST00000468117 BPIFCQ8NFQ6 507 aa16.22■□□□□ 0.19
TMEM53-207ENST00000468117 OR5T1Q8NG75 326 aa16.22■□□□□ 0.19
TMEM53-207ENST00000468117 SGMS2Q8NHU3 365 aa16.22■□□□□ 0.19
TMEM53-207ENST00000468117 TMEM231Q9H6L2 316 aa16.22■□□□□ 0.19
TMEM53-207ENST00000468117 KCNIP2Q9NS61 270 aa16.22■□□□□ 0.19
TMEM53-207ENST00000468117 SLC45A2Q9UMX9 530 aa16.22■□□□□ 0.19
TMEM53-207ENST00000468117 HMGB3O15347 200 aaKnown RBP16.21■□□□□ 0.19
TMEM53-207ENST00000468117 FGF8P55075 233 aaPredicted RBP16.21■□□□□ 0.19
TMEM53-207ENST00000468117 PRR20EP86478 221 aa16.21■□□□□ 0.19
TMEM53-207ENST00000468117 PRR20CP86479 221 aa16.21■□□□□ 0.19
TMEM53-207ENST00000468117 PRR20DP86480 221 aa16.21■□□□□ 0.19
TMEM53-207ENST00000468117 PRR20BP86481 221 aa16.21■□□□□ 0.19
TMEM53-207ENST00000468117 PRR20AP86496 221 aa16.21■□□□□ 0.19
TMEM53-207ENST00000468117 TMUB1Q9BVT8 246 aa16.21■□□□□ 0.19
TMEM53-207ENST00000468117 I3L2K1 104 aa16.21■□□□□ 0.18
TMEM53-207ENST00000468117 ECSCRQ19T08 205 aa16.21■□□□□ 0.18
TMEM53-207ENST00000468117 SLC39A9Q9NUM3 307 aa16.21■□□□□ 0.18
TMEM53-207ENST00000468117 PITPNC1Q9UKF7 332 aa16.21■□□□□ 0.18
TMEM53-207ENST00000468117 IGKV1D-37A0A075B6S9 117 aa16.2■□□□□ 0.18
TMEM53-207ENST00000468117 SOX15O60248 233 aa16.2■□□□□ 0.18
TMEM53-207ENST00000468117 IGHV4-59P01825 116 aa16.2■□□□□ 0.18
TMEM53-207ENST00000468117 LINC00869P0C866 280 aa16.2■□□□□ 0.18
TMEM53-207ENST00000468117 OR1L6Q8NGR2 347 aa16.2■□□□□ 0.18
TMEM53-207ENST00000468117 MBD3L1Q8WWY6 194 aa16.2■□□□□ 0.18
TMEM53-207ENST00000468117 FANCD2OSQ96PS1 177 aa16.2■□□□□ 0.18
TMEM53-207ENST00000468117 MAP1LC3B2A6NCE7 125 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 ZFP92A6NM28 416 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 K7EIM0 57 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 UQCC3Q6UW78 93 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 UNQ5815/PRO19632Q6UWF5 114 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 THAP8Q8NA92 274 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 TMEM116Q8NCL8 245 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 MAP1LC3BQ9GZQ8 125 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 CYB5BO43169 146 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 HBE1P02100 147 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 ZNF90Q03938 601 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 C9orf152Q5JTZ5 239 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 C9orf139Q6ZV77 190 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 COMMD1Q8N668 190 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 RAB24Q969Q5 203 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 NARS2Q96I59 477 aaKnown RBP16.19■□□□□ 0.18
TMEM53-207ENST00000468117 LINC00052Q96N35 136 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 FAM210AQ96ND0 272 aa16.19■□□□□ 0.18
TMEM53-207ENST00000468117 ACTR3CQ9C0K3 210 aaPredicted RBP16.19■□□□□ 0.18
TMEM53-207ENST00000468117 IGLV11-55A0A075B6I3 123 aa16.18■□□□□ 0.18
TMEM53-207ENST00000468117 TRAV1-1A0A0B4J248 108 aa16.18■□□□□ 0.18
TMEM53-207ENST00000468117 CTXND1A0A1B0GTU2 59 aa16.18■□□□□ 0.18
TMEM53-207ENST00000468117 G3V318 75 aa16.18■□□□□ 0.18
TMEM53-207ENST00000468117 IER3P46695 156 aa16.18■□□□□ 0.18
TMEM53-207ENST00000468117 CYP2G1PQ6ZSU1 146 aa16.18■□□□□ 0.18
TMEM53-207ENST00000468117 BTBD17A6NE02 478 aa16.18■□□□□ 0.18
TMEM53-207ENST00000468117 CDC34P49427 236 aaPredicted RBP16.18■□□□□ 0.18
TMEM53-207ENST00000468117 GUK1Q16774 197 aa16.18■□□□□ 0.18
TMEM53-207ENST00000468117 IL17RELQ6ZVW7 336 aa16.18■□□□□ 0.18
TMEM53-207ENST00000468117 SCRT1Q9BWW7 348 aa16.18■□□□□ 0.18
TMEM53-207ENST00000468117 GSX1Q9H4S2 264 aaPredicted RBP16.18■□□□□ 0.18
TMEM53-207ENST00000468117 TREM1Q9NP99 234 aa16.18■□□□□ 0.18
TMEM53-207ENST00000468117 TCRBV4S1A1TA0A5B7 111 aa16.17■□□□□ 0.18
TMEM53-207ENST00000468117 ZNF48Q96MX3 618 aaPredicted RBP16.17■□□□□ 0.18
TMEM53-207ENST00000468117 EIF5A2Q9GZV4 153 aaKnown RBP16.17■□□□□ 0.18
TMEM53-207ENST00000468117 TNFRSF19Q9NS68 423 aa16.17■□□□□ 0.18
TMEM53-207ENST00000468117 A0A1W2PPV4 95 aa16.16■□□□□ 0.18
TMEM53-207ENST00000468117 SEC14L6B5MCN3 397 aa16.16■□□□□ 0.18
TMEM53-207ENST00000468117 BLCAPP62952 87 aa16.16■□□□□ 0.18
TMEM53-207ENST00000468117 DEFA5Q01523 94 aa16.16■□□□□ 0.18
TMEM53-207ENST00000468117 LINC00527Q9UJ94 153 aa16.16■□□□□ 0.18
TMEM53-207ENST00000468117 S4R3C0 116 aa16.16■□□□□ 0.18
TMEM53-207ENST00000468117 M0QZK8 103 aa16.16■□□□□ 0.18
TMEM53-207ENST00000468117 CD5P06127 495 aa16.16■□□□□ 0.18
TMEM53-207ENST00000468117 KRTAP1-1Q07627 177 aa16.16■□□□□ 0.18
TMEM53-207ENST00000468117 AKIRIN2Q53H80 203 aa16.16■□□□□ 0.18
TMEM53-207ENST00000468117 FAM110DQ8TAY7 271 aaPredicted RBP16.16■□□□□ 0.18
TMEM53-207ENST00000468117 SEPSECSQ9HD40 501 aaKnown RBP16.16■□□□□ 0.18
TMEM53-207ENST00000468117 HAGHQ16775 308 aa16.15■□□□□ 0.18
TMEM53-207ENST00000468117 C16orf82Q7Z2V1 217 aa16.15■□□□□ 0.18
TMEM53-207ENST00000468117 OR4X1Q8NH49 305 aa16.15■□□□□ 0.18
TMEM53-207ENST00000468117 RARRES2Q99969 163 aa16.15■□□□□ 0.18
TMEM53-207ENST00000468117 C9JQL5 133 aa16.14■□□□□ 0.17
TMEM53-207ENST00000468117 OR2J3O76001 311 aa16.14■□□□□ 0.17
TMEM53-207ENST00000468117 ZP3P21754 424 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms