RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 RANGRFQ9HD47 186 aaPredicted RBP11.76□□□□□ -0.53
SNIP1-202ENST00000468040 MBD2Q9UBB5 411 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 PEF1Q9UBV8 284 aaKnown RBP11.76□□□□□ -0.53
SNIP1-202ENST00000468040 S4R3C0 116 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 IGHV3-23P01764 117 aa11.75□□□□□ -0.53
SNIP1-202ENST00000468040 HSPB1P04792 205 aaKnown RBP11.75□□□□□ -0.53
SNIP1-202ENST00000468040 NPBWR1P48145 328 aa11.75□□□□□ -0.53
SNIP1-202ENST00000468040 Q56UQ5 140 aa11.75□□□□□ -0.53
SNIP1-202ENST00000468040 ACSM6Q6P461 480 aa11.75□□□□□ -0.53
SNIP1-202ENST00000468040 SLC16A13Q7RTY0 426 aa11.75□□□□□ -0.53
SNIP1-202ENST00000468040 STX12Q86Y82 276 aa11.75□□□□□ -0.53
SNIP1-202ENST00000468040 TMEM252Q8N6L7 170 aa11.75□□□□□ -0.53
SNIP1-202ENST00000468040 OR10P1Q8NGE3 313 aa11.75□□□□□ -0.53
SNIP1-202ENST00000468040 RNF126Q9BV68 326 aa11.75□□□□□ -0.53
SNIP1-202ENST00000468040 SLC25A31Q9H0C2 315 aa11.75□□□□□ -0.53
SNIP1-202ENST00000468040 TRAV14DV4A0A0A6YYC5 116 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 ANKRD34BA5PLL1 514 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 FAM24AA6NFZ4 105 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 PRSS46E5RG02 174 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 CCL24O00175 119 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 SCGB2A1O75556 95 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 IGHV3-48P01763 117 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 LYL1P12980 280 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 OR8G2PQ6IF36 304 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 CLEC19AQ6UXS0 136 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 UBAC2Q8NBM4 344 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 OR11H1Q8NG94 326 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 OR1N2Q8NGR9 330 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 OR4X1Q8NH49 305 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 DCUN1D4Q92564 292 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 DPF1Q92782 380 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 BSCL2Q96G97 398 aaPredicted RBP11.74□□□□□ -0.53
SNIP1-202ENST00000468040 SLC35E1Q96K37 410 aa11.74□□□□□ -0.53
SNIP1-202ENST00000468040 IGSF23A1L1A6 192 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 OR2T8A6NH00 312 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 PMS2P5A8MQ11 134 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 LINC01619G3V211 115 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 GNG7O60262 68 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 CLEC3BP05452 202 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 ZP3P21754 424 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 GPR183P32249 361 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 ARL3P36405 182 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 MYCNOSP40205 109 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 SULT1A1P50225 295 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 HBG1P69891 147 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 HBG2P69892 147 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 BAXQ07812 192 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 ZNF616Q08AN1 781 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 MLANAQ16655 118 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 DEFB136Q30KP8 78 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 SPSB3Q6PJ21 355 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 TMEM116Q8NCL8 245 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 RAX2Q96IS3 184 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 GGACTQ9BVM4 153 aa11.73□□□□□ -0.53
SNIP1-202ENST00000468040 IGHV4OR15-8A0A075B7B6 117 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 TRAV30A0A087WSZ9 112 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 A0A087WW49 117 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 A0A1B0GVG6 124 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 FNDC10F2Z333 226 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 F8W735 103 aaPredicted RBP11.72□□□□□ -0.53
SNIP1-202ENST00000468040 NUPL2O15504 423 aaKnown RBP11.72□□□□□ -0.53
SNIP1-202ENST00000468040 TGOLN2O43493 480 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 GGCTO75223 188 aaKnown RBP11.72□□□□□ -0.53
SNIP1-202ENST00000468040 CLN5O75503 358 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 CCNKO75909 580 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 CST7O76096 145 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 TRBV12-3P01733 135 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 PF4P02776 101 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 RND2P52198 227 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 DLK1P80370 383 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 FHL3Q13643 280 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 ACOT7LQ6ZUV0 252 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 ACY3Q96HD9 319 aa11.72□□□□□ -0.53
SNIP1-202ENST00000468040 TENM1Q9UKZ4 2725 aa11.71□□□□□ -0.53
SNIP1-202ENST00000468040 PPP5D1E7EU14 171 aa11.71□□□□□ -0.53
SNIP1-202ENST00000468040 BMPR1BO00238 502 aa11.71□□□□□ -0.53
SNIP1-202ENST00000468040 S100A11P31949 105 aa11.71□□□□□ -0.53
SNIP1-202ENST00000468040 EWSR1Q01844 656 aaKnown RBP eCLIP11.71□□□□□ -0.53
SNIP1-202ENST00000468040 GAMTQ14353 236 aa11.71□□□□□ -0.53
SNIP1-202ENST00000468040 RPEL1Q2QD12 228 aa11.71□□□□□ -0.53
SNIP1-202ENST00000468040 Q5BKY6 102 aa11.71□□□□□ -0.53
SNIP1-202ENST00000468040 AKAP14Q86UN6 197 aa11.71□□□□□ -0.53
SNIP1-202ENST00000468040 HAPLN4Q86UW8 402 aa11.71□□□□□ -0.53
SNIP1-202ENST00000468040 TMEM217Q8N7C4 229 aa11.71□□□□□ -0.53
SNIP1-202ENST00000468040 NPIPB3Q92617 1050 aa11.71□□□□□ -0.53
SNIP1-202ENST00000468040 DUX3Q96PT4 197 aa11.71□□□□□ -0.53
SNIP1-202ENST00000468040 MRPL36Q9P0J6 103 aaKnown RBP11.71□□□□□ -0.53
SNIP1-202ENST00000468040 RPL12P30050 165 aaKnown RBP11.7□□□□□ -0.54
SNIP1-202ENST00000468040 HOXD3P31249 432 aaPredicted RBP11.7□□□□□ -0.54
SNIP1-202ENST00000468040 NUP62P37198 522 aaPredicted RBP11.7□□□□□ -0.54
SNIP1-202ENST00000468040 AKR1C1Q04828 323 aa11.7□□□□□ -0.54
SNIP1-202ENST00000468040 RELQ04864 619 aaPredicted RBP11.7□□□□□ -0.54
SNIP1-202ENST00000468040 SLC38A11Q08AI6 406 aa11.7□□□□□ -0.54
SNIP1-202ENST00000468040 ARL16Q0P5N6 197 aa11.7□□□□□ -0.54
SNIP1-202ENST00000468040 LILRB2Q8N423 598 aa11.7□□□□□ -0.54
SNIP1-202ENST00000468040 OR1S2Q8NGQ3 325 aa11.7□□□□□ -0.54
SNIP1-202ENST00000468040 ZC4H2Q9NQZ6 224 aa11.7□□□□□ -0.54
SNIP1-202ENST00000468040 FXYD6-FXYD2A0A087WZ82 144 aa11.69□□□□□ -0.54
SNIP1-202ENST00000468040 G3V3Q6 166 aa11.69□□□□□ -0.54
SNIP1-202ENST00000468040 TSPAN15O95858 294 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms