RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 TRBV10-2A0A0K0K1G8 114 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 A0A1B0GV72 72 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 C1orf196B1AJZ1 125 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 AIPO00170 330 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 BANF1O75531 89 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 NDUFC2O95298 119 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 IGKV1-16P04430 117 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 METTL15P1P0C7V9 234 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 TRGC1P0CF51 173 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 SPI1P17947 270 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 PHBP35232 272 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 PIGPP57054 158 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 TCTAP57738 103 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 GNG5P63218 68 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 HES1Q14469 280 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 TSNQ15631 228 aaKnown RBP0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 LINC01554Q52M75 96 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 FAM27BQ5VT28 67 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 DPPA3Q6W0C5 159 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 LCA10Q71F78 164 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 SMIM15Q7Z3B0 74 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 TRAPPC6BQ86SZ2 158 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 AKAP14Q86UN6 197 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 HIST3H2BBQ8N257 126 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 TMEM86AQ8N2M4 240 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 EXOC3-AS1Q8N2X6 119 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 ZNF439Q8NDP4 499 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 TTTY12Q9BZ98 90 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 IMUPQ9GZP8 106 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 BOLA2Q9H3K6 86 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 OSTCQ9NRP0 149 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 LYRM2Q9NU23 88 aaPredicted RBP0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 PRO2289Q9P1D8 64 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 SMPXQ9UHP9 88 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 SSR3Q9UNL2 185 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 SLC35A3Q9Y2D2 325 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 AMMECR1Q9Y4X0 333 aaPredicted RBP0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 KIF1BO60333 1816 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 KIF13BQ9NQT8 1826 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 TOPBP1Q92547 1522 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 KDM5BQ9UGL1 1544 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 KIF24Q5T7B8 1368 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 IGLV3-9A0A075B6K5 115 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 MEIS3P1A6NDR6 274 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 OR51F1A6NGY5 319 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 ZNF860A6NHJ4 632 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 HMSDA8MTL9 139 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 ZNF705FA8MVS1 300 aaPredicted RBP0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 PPP5D1E7EU14 171 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 H3BRN7 92 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 H7C1C5 153 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 GPR31O00270 319 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 CYB5BO43169 146 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 CST8O60676 142 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 TCL1BO95988 128 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 IFNA7P01567 189 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 CSN2P05814 226 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 CRHP06850 196 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 RPSAP08865 295 aaKnown RBP0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 HTR1AP08908 422 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 P0DMU3 169 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 FAM231AP0DMU4 169 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 FAM231CP0DMU5 169 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 IDO1P14902 403 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 GLRXP35754 106 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 AQP4P55087 323 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 YPEL3P61236 119 aaPredicted RBP0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 LCN6P62502 163 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 EIF5AP63241 154 aaKnown RBP0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 RELAQ04206 551 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 SLC38A11Q08AI6 406 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 NDUFA5Q16718 116 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 LCN15Q6UWW0 184 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 GRINAQ7Z429 371 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 KTN1-AS1Q86SY8 53 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 STX19Q8N4C7 294 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 WFDC11Q8NEX6 87 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 OR8B3Q8NGG8 313 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 OR5A1Q8NGJ0 315 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 OR8D4Q8NGM9 314 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 OR10K1Q8NGX5 313 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 PFN4Q8NHR9 129 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 WFDC5Q8TCV5 224 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 ZHX1-C8orf76Q96EF9 292 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 PBDC1Q9BVG4 233 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 SH3BGRL3Q9H299 93 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 MIXL1Q9H2W2 232 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 CENPHQ9H3R5 247 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 RNF122Q9H9V4 155 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 CKLFQ9UBR5 152 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 BAIAP2Q9UQB8 552 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 FMN1Q68DA7 1419 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 ADAMTS7Q9UKP4 1686 aa0.88□□□□□ -2.27
GTF3C3-209ENST00000466862 LTBP2Q14767 1821 aa0.87□□□□□ -2.27
GTF3C3-209ENST00000466862 ECM29Q5VYK3 1845 aa0.87□□□□□ -2.27
GTF3C3-209ENST00000466862 SCAF11Q99590 1463 aaKnown RBP0.87□□□□□ -2.27
GTF3C3-209ENST00000466862 SCN9AQ15858 1988 aa0.87□□□□□ -2.27
GTF3C3-209ENST00000466862 A0A087X0T9 212 aa0.87□□□□□ -2.27
GTF3C3-209ENST00000466862 IGKV1-9A0A0C4DH69 117 aa0.87□□□□□ -2.27
GTF3C3-209ENST00000466862 GNG14A0A1W2PPG7 69 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms