RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 DCCP43146 1447 aa0.27□□□□□ -2.37
CHMP2B-202ENST00000466696 C9orf84Q5VXU9 1444 aa0.27□□□□□ -2.37
CHMP2B-202ENST00000466696 LOC110117498A0A087WWA1 95 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 LINC00854A0A1B0GVQ3 168 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 C7orf71A4D174 169 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 C2orf70A6NJV1 201 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 EEF1E1-BLOC1S5C9J1V9 151 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 INMT-MINDY4F8WBC2 141 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 J3QRK9 145 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 CETN3O15182 167 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 HLA-DRB1P01911 266 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 ISG15P05161 165 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 CTSDP07339 412 aaPredicted RBP0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 RBP1P09455 135 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 C8orf88P0DMB2 117 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 ZNF25P17030 456 aaPredicted RBP0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 SSR2P43308 183 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 MAGOHP61326 146 aaKnown RBP0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 PMAIP1Q13794 54 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 CLEC6AQ6EIG7 209 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 SOSTDC1Q6X4U4 206 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 ST6GALNAC3Q8NDV1 305 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 OR2T10Q8NGZ9 312 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 ZNF431Q8TF32 576 aaPredicted RBP0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 FAM172AQ8WUF8 416 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 ITFG2Q969R8 447 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 TOMM6Q96B49 74 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 TSPAN32Q96QS1 320 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 OR51V1Q9H2C8 321 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 OR51I1Q9H343 314 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 IMP3Q9NV31 184 aaKnown RBP0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 MED29Q9NX70 200 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 FBXL12Q9NXK8 326 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 TMEM56-RWDD3S4R434 201 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 MYO3BQ8WXR4 1341 aa0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 TNRC6BQ9UPQ9 1833 aaKnown RBP0.26□□□□□ -2.37
CHMP2B-202ENST00000466696 ZFC3H1O60293 1989 aaKnown RBP0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 TOPBP1Q92547 1522 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 IGLV3-32A0A0A0MS00 114 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 TRAV3A0A0B4J244 114 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 TRAV12-1A0A0B4J245 112 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 EXOC1LA0A1B0GW35 172 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 EVPLLA8MZ36 301 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 C1orf196B1AJZ1 125 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 ZNF736B4DX44 427 aaPredicted RBP0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 M0QX08 132 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 M0R036 132 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 CYB5BO43169 146 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 OR5G3P0C626 314 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 MIFP14174 115 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 SULT1A1P50225 295 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 FXYD6P3P58550 94 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 RAB5BP61020 215 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 SNRPD2P62316 118 aaKnown RBP0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 PDE6HQ13956 83 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 COTL1Q14019 142 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 HIST3H3Q16695 136 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 BRMS1LQ5PSV4 323 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 LYRM7Q5U5X0 104 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 C8orf74Q6P047 294 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 CD200R1LQ6Q8B3 271 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 Q6ZQT0 140 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 TEN1Q86WV5 123 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 SBSPONQ8IVN8 264 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 IFT20Q8IY31 132 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 PLPP5Q8NEB5 264 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 PFN4Q8NHR9 129 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 CANT1Q8WVQ1 401 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 H1FXQ92522 213 aaKnown RBP0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 KLK6Q92876 244 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 HIST1H2BLQ99880 126 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 DCSTAMPQ9H295 470 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 C11orf68Q9H3H3 251 aaKnown RBP0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 C14orf132Q9NPU4 83 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 C14orf105Q9NVL8 296 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 EPDR1Q9UM22 224 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 TNFSF18Q9UNG2 199 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 HS3ST2Q9Y278 367 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 UTP11Q9Y3A2 253 aaKnown RBP0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 ATP6V1DQ9Y5K8 247 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 V9GYY5 206 aaPredicted RBP0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 ANAPC1Q9H1A4 1944 aa0.25□□□□□ -2.37
CHMP2B-202ENST00000466696 MED12Q93074 2177 aa0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 A0A087X0T9 212 aa0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 H3BRM9 83 aa0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 AHSA1O95433 338 aa0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 IGKV1-5P01602 117 aa0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 IGLV3-1P01715 115 aa0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 CLPSP04118 112 aa0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 OR4E1P0C645 316 aa0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 SRP14P37108 136 aaKnown RBP0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 OMPP47874 163 aa0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 CEBPGP53567 150 aa0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 DEFA1P59665 94 aa0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 AP3S2P59780 193 aa0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 EIF5AP63241 154 aaKnown RBP0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 PSG9Q00887 426 aa0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 MYL5Q02045 173 aa0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 SRSF6Q13247 344 aaKnown RBP0.24□□□□□ -2.37
CHMP2B-202ENST00000466696 SPA17Q15506 151 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms