RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 OR4X1Q8NH49 305 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 OR1S1Q8NH92 325 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 COQ8AQ8NI60 647 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 DTD1Q8TEA8 209 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 OR10C1Q96KK4 312 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 PRR25Q96S07 402 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 HIPK2Q9H2X6 1198 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 RBKSQ9H477 322 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 PALMDQ9NP74 551 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 HEYLQ9NQ87 328 aaPredicted RBP7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 UFC1Q9Y3C8 167 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 U3KQ87 197 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 FAM240BA0A1B0GVZ2 78 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 RPS10-NUDT3A0A1W2PQS6 291 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 C15orf62A8K5M9 175 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 NUPL2O15504 423 aaKnown RBP7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 CLN5O75503 358 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 LY86O95711 162 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 TMEM50AO95807 157 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 HOXB5P09067 269 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 EDN2P20800 178 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 NPY1RP25929 384 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 NPBWR1P48145 328 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 ID3Q02535 119 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 RELQ04864 619 aaPredicted RBP7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 C4orf46Q504U0 113 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 Q56UQ5 140 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 LCN12Q6JVE5 192 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 C11orf87Q6NUJ2 197 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 HAPLN4Q86UW8 402 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 TMEM116Q8NCL8 245 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 PINX1Q96BK5 328 aaKnown RBP7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 NUDT15Q9NV35 164 aa7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 MRPL36Q9P0J6 103 aaKnown RBP7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 MRPL27Q9P0M9 148 aaKnown RBP7.16□□□□□ -1.26
SDCCAG3-208ENST00000466579 ZNF320A2RRD8 509 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 IZUMO1RA6ND01 250 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 ZNF785A8K8V0 405 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 MPTX1A8MV57 137 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 A8MZ25 164 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 GNG7O60262 68 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 MED6O75586 246 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 ADAP1O75689 374 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 NXPH3O95157 252 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 IGHV3-48P01763 117 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 IL5P05113 134 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 H2AFB2P0C5Z0 115 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 SLC25A4P12235 298 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 OPRK1P41145 380 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 MLANAQ16655 118 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 CD300EQ496F6 205 aaPredicted RBP7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 TM4SF20Q53R12 229 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 PRSS54Q6PEW0 395 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 Q8N1Y9 231 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 UBAC2Q8NBM4 344 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 UXS1Q8NBZ7 420 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 OR52B4Q8NGK2 314 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 OR4D5Q8NGN0 318 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 ZNF431Q8TF32 576 aaPredicted RBP7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 B9D2Q9BPU9 175 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 DAZ1Q9NQZ3 744 aaKnown RBP7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 MLXQ9UH92 298 aa7.15□□□□□ -1.26
SDCCAG3-208ENST00000466579 COL7A1Q02388 2944 aa7.14□□□□□ -1.27
SDCCAG3-208ENST00000466579 TRAV6A0A075B6T7 132 aa7.14□□□□□ -1.27
SDCCAG3-208ENST00000466579 TRAV30A0A087WSZ9 112 aa7.14□□□□□ -1.27
SDCCAG3-208ENST00000466579 TRAV25A0A0B4J276 109 aa7.14□□□□□ -1.27
SDCCAG3-208ENST00000466579 IGHV3-35A0A0C4DH35 117 aa7.14□□□□□ -1.27
SDCCAG3-208ENST00000466579 SYNGR2O43760 224 aa7.14□□□□□ -1.27
SDCCAG3-208ENST00000466579 IFNA21P01568 189 aa7.14□□□□□ -1.27
SDCCAG3-208ENST00000466579 IGKV1-17P01599 117 aa7.14□□□□□ -1.27
SDCCAG3-208ENST00000466579 GPX4P36969 197 aaPredicted RBP7.14□□□□□ -1.27
SDCCAG3-208ENST00000466579 CD69Q07108 199 aa7.14□□□□□ -1.27
SDCCAG3-208ENST00000466579 ETFRF1Q6IPR1 90 aa7.14□□□□□ -1.27
SDCCAG3-208ENST00000466579 ZNF600Q6ZNG1 722 aa7.14□□□□□ -1.27
SDCCAG3-208ENST00000466579 CACNG8Q8WXS5 425 aa7.14□□□□□ -1.27
SDCCAG3-208ENST00000466579 CIB3Q96Q77 187 aaPredicted RBP7.14□□□□□ -1.27
SDCCAG3-208ENST00000466579 ZFAND3Q9H8U3 227 aa7.14□□□□□ -1.27
SDCCAG3-208ENST00000466579 PRSS46E5RG02 174 aa7.13□□□□□ -1.27
SDCCAG3-208ENST00000466579 IFNA10P01566 189 aa7.13□□□□□ -1.27
SDCCAG3-208ENST00000466579 IGLC1P0CG04 106 aa7.13□□□□□ -1.27
SDCCAG3-208ENST00000466579 TOMM20LQ6UXN7 152 aa7.13□□□□□ -1.27
SDCCAG3-208ENST00000466579 NRARPQ7Z6K4 114 aa7.13□□□□□ -1.27
SDCCAG3-208ENST00000466579 ZBTB8BQ8NAP8 495 aaPredicted RBP7.13□□□□□ -1.27
SDCCAG3-208ENST00000466579 OR1S2Q8NGQ3 325 aa7.13□□□□□ -1.27
SDCCAG3-208ENST00000466579 DYNLRB2Q8TF09 96 aa7.13□□□□□ -1.27
SDCCAG3-208ENST00000466579 SEC22CQ9BRL7 303 aa7.13□□□□□ -1.27
SDCCAG3-208ENST00000466579 SMPXQ9UHP9 88 aa7.13□□□□□ -1.27
SDCCAG3-208ENST00000466579 SMAD5-AS1Q9Y6J3 95 aa7.13□□□□□ -1.27
SDCCAG3-208ENST00000466579 IGHV7-4-1A0A0J9YVY3 117 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 SCGB2A1O75556 95 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 SCAF4O95104 1147 aaKnown RBP7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 NKX2-1P43699 371 aaPredicted RBP7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 RND2P52198 227 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 YPEL3P61236 119 aaPredicted RBP7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 RPP30P78346 268 aaKnown RBP7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 PRR20EP86478 221 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 PRR20CP86479 221 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 PRR20DP86480 221 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 PRR20BP86481 221 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 PRR20AP86496 221 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms