RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 PSMB6P28072 239 aa10.59□□□□□ -0.71
CXCR4-203ENST00000466288 MFAP2P55001 183 aa10.59□□□□□ -0.71
CXCR4-203ENST00000466288 PPP1R1AQ13522 171 aa10.59□□□□□ -0.71
CXCR4-203ENST00000466288 OR10J5Q8NHC4 309 aa10.59□□□□□ -0.71
CXCR4-203ENST00000466288 FAM210AQ96ND0 272 aa10.59□□□□□ -0.71
CXCR4-203ENST00000466288 CSTL1Q9H114 145 aa10.59□□□□□ -0.71
CXCR4-203ENST00000466288 UFC1Q9Y3C8 167 aa10.59□□□□□ -0.71
CXCR4-203ENST00000466288 TRBV7-1A0A0A6YYK4 115 aa10.58□□□□□ -0.72
CXCR4-203ENST00000466288 IGHV3-35A0A0C4DH35 117 aa10.58□□□□□ -0.72
CXCR4-203ENST00000466288 PRSS29PA6NIE9 313 aa10.58□□□□□ -0.72
CXCR4-203ENST00000466288 DBX1A6NMT0 343 aa10.58□□□□□ -0.72
CXCR4-203ENST00000466288 GOSR2O14653 212 aa10.58□□□□□ -0.72
CXCR4-203ENST00000466288 RTL8CO15255 209 aa10.58□□□□□ -0.72
CXCR4-203ENST00000466288 DIRAS3O95661 229 aa10.58□□□□□ -0.72
CXCR4-203ENST00000466288 AREGP15514 252 aa10.58□□□□□ -0.72
CXCR4-203ENST00000466288 NFYAP23511 347 aaPredicted RBP10.58□□□□□ -0.72
CXCR4-203ENST00000466288 OR11H2Q8NH07 326 aa10.58□□□□□ -0.72
CXCR4-203ENST00000466288 OR5B3Q8NH48 314 aa10.58□□□□□ -0.72
CXCR4-203ENST00000466288 COMMD9Q9P000 198 aa10.58□□□□□ -0.72
CXCR4-203ENST00000466288 IGLV11-55A0A075B6I3 123 aa10.57□□□□□ -0.72
CXCR4-203ENST00000466288 MPTX1A8MV57 137 aa10.57□□□□□ -0.72
CXCR4-203ENST00000466288 G3V3Q6 166 aa10.57□□□□□ -0.72
CXCR4-203ENST00000466288 DEFB4AO15263 64 aa10.57□□□□□ -0.72
CXCR4-203ENST00000466288 SLC25A4P12235 298 aa10.57□□□□□ -0.72
CXCR4-203ENST00000466288 MYOD1P15172 320 aa10.57□□□□□ -0.72
CXCR4-203ENST00000466288 RPL27AP46776 148 aaKnown RBP10.57□□□□□ -0.72
CXCR4-203ENST00000466288 H2BFSP57053 126 aa10.57□□□□□ -0.72
CXCR4-203ENST00000466288 APRG1Q8IVJ8 170 aa10.57□□□□□ -0.72
CXCR4-203ENST00000466288 VKORC1L1Q8N0U8 176 aa10.57□□□□□ -0.72
CXCR4-203ENST00000466288 OR11H4Q8NGC9 324 aa10.57□□□□□ -0.72
CXCR4-203ENST00000466288 CD300LFQ8TDQ1 290 aa10.57□□□□□ -0.72
CXCR4-203ENST00000466288 RTBDNQ9BSG5 229 aaPredicted RBP10.57□□□□□ -0.72
CXCR4-203ENST00000466288 KCNIP3Q9Y2W7 256 aa10.57□□□□□ -0.72
CXCR4-203ENST00000466288 RBM7Q9Y580 266 aaKnown RBP10.57□□□□□ -0.72
CXCR4-203ENST00000466288 SMLR1H3BR10 107 aa10.56□□□□□ -0.72
CXCR4-203ENST00000466288 FCGR3BO75015 233 aa10.56□□□□□ -0.72
CXCR4-203ENST00000466288 PGAM2P15259 253 aa10.56□□□□□ -0.72
CXCR4-203ENST00000466288 RPA2P15927 270 aa10.56□□□□□ -0.72
CXCR4-203ENST00000466288 HIST1H1BP16401 226 aaKnown RBP10.56□□□□□ -0.72
CXCR4-203ENST00000466288 AKR1C4P17516 323 aa10.56□□□□□ -0.72
CXCR4-203ENST00000466288 VAMP1P23763 118 aa10.56□□□□□ -0.72
CXCR4-203ENST00000466288 GPR183P32249 361 aa10.56□□□□□ -0.72
CXCR4-203ENST00000466288 ZNF124Q15973 351 aa10.56□□□□□ -0.72
CXCR4-203ENST00000466288 LGALSLQ3ZCW2 172 aaPredicted RBP10.56□□□□□ -0.72
CXCR4-203ENST00000466288 GSG1LQ6UXU4 331 aa10.56□□□□□ -0.72
CXCR4-203ENST00000466288 CXorf58Q96LI9 332 aa10.56□□□□□ -0.72
CXCR4-203ENST00000466288 ZNF2Q9BSG1 426 aaPredicted RBP10.56□□□□□ -0.72
CXCR4-203ENST00000466288 NMES1Q9C002 83 aa10.56□□□□□ -0.72
CXCR4-203ENST00000466288 A0A0D9SG52 128 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 OR4C46A6NHA9 309 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 ATP6V1G1O75348 118 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 IFNA7P01567 189 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 Q5BKY6 102 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 CCDC71LQ8N9Z2 235 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 ZNF502Q8TBZ5 544 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 TMEM190Q8WZ59 177 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 MOB3AQ96BX8 217 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 APOBP04114 4563 aaKnown RBP10.55□□□□□ -0.72
CXCR4-203ENST00000466288 C11orf94C9JXX5 98 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 L7N2F9 121 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 B3GALNT1O75752 331 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 KBTBD11O94819 623 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 REG1AP05451 166 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 S100A1P23297 94 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 ADMP35318 185 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 HERV-K104P61576 105 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 RPL30P62888 115 aaKnown RBP10.55□□□□□ -0.72
CXCR4-203ENST00000466288 ZNF345Q14585 488 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 PUSL1Q8N0Z8 303 aaKnown RBP10.55□□□□□ -0.72
CXCR4-203ENST00000466288 TMEM167AQ8TBQ9 72 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 TMEM230Q96A57 120 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 PDCD10Q9BUL8 212 aa10.55□□□□□ -0.72
CXCR4-203ENST00000466288 DAZ1Q9NQZ3 744 aaKnown RBP10.55□□□□□ -0.72
CXCR4-203ENST00000466288 IGKV1D-8A0A087WSZ0 117 aa10.54□□□□□ -0.72
CXCR4-203ENST00000466288 CRYM-AS1A6NIL9 109 aa10.54□□□□□ -0.72
CXCR4-203ENST00000466288 DEFA4P12838 97 aa10.54□□□□□ -0.72
CXCR4-203ENST00000466288 MAS1LP35410 378 aa10.54□□□□□ -0.72
CXCR4-203ENST00000466288 RND3P61587 244 aa10.54□□□□□ -0.72
CXCR4-203ENST00000466288 SRPXP78539 464 aa10.54□□□□□ -0.72
CXCR4-203ENST00000466288 OR2F1Q13607 317 aa10.54□□□□□ -0.72
CXCR4-203ENST00000466288 OR2B11Q5JQS5 317 aa10.54□□□□□ -0.72
CXCR4-203ENST00000466288 KCTD9Q7L273 389 aa10.54□□□□□ -0.72
CXCR4-203ENST00000466288 H1FOOQ8IZA3 346 aaPredicted RBP10.54□□□□□ -0.72
CXCR4-203ENST00000466288 OR4A5Q8NH83 315 aa10.54□□□□□ -0.72
CXCR4-203ENST00000466288 VSTM2AQ8TAG5 236 aa10.54□□□□□ -0.72
CXCR4-203ENST00000466288 MAFIPQ8WZ33 124 aa10.54□□□□□ -0.72
CXCR4-203ENST00000466288 CGB1A6NKQ9 187 aa10.53□□□□□ -0.72
CXCR4-203ENST00000466288 TGOLN2O43493 480 aa10.53□□□□□ -0.72
CXCR4-203ENST00000466288 PET100P0DJ07 73 aa10.53□□□□□ -0.72
CXCR4-203ENST00000466288 S100GP29377 79 aa10.53□□□□□ -0.72
CXCR4-203ENST00000466288 S100A11P31949 105 aa10.53□□□□□ -0.72
CXCR4-203ENST00000466288 FCGR2CP31995 323 aa10.53□□□□□ -0.72
CXCR4-203ENST00000466288 OPCMLQ14982 345 aa10.53□□□□□ -0.72
CXCR4-203ENST00000466288 TEX261Q6UWH6 196 aa10.53□□□□□ -0.72
CXCR4-203ENST00000466288 LRTM2Q8N967 370 aa10.53□□□□□ -0.72
CXCR4-203ENST00000466288 HRH4Q9H3N8 390 aa10.53□□□□□ -0.72
CXCR4-203ENST00000466288 U3KQ87 197 aa10.53□□□□□ -0.72
CXCR4-203ENST00000466288 IGHV4-4A0A075B6R2 117 aa10.52□□□□□ -0.73
CXCR4-203ENST00000466288 TEX13DA0A0J9YY54 714 aaPredicted RBP10.52□□□□□ -0.73
CXCR4-203ENST00000466288 IFNA21P01568 189 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms